RNA–Protein interactions for RNA: ENST00000344229.7

RNF13-201, Transcript of ring finger protein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF13, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-201ENST00000344229 DDX58O95786 925 aaKnown RBP15.5■□□□□ 0.07
RNF13-201ENST00000344229 RIC3Q7Z5B4 369 aa15.5■□□□□ 0.07
RNF13-201ENST00000344229 BICC1Q9H694 974 aaKnown RBP15.5■□□□□ 0.07
RNF13-201ENST00000344229 SHANK3Q9BYB0 1731 aa15.5■□□□□ 0.07
RNF13-201ENST00000344229 LAMB4A4D0S4 1761 aa15.5■□□□□ 0.07
RNF13-201ENST00000344229 ANO2Q9NQ90 1003 aa15.5■□□□□ 0.07
RNF13-201ENST00000344229 ZNF335Q9H4Z2 1342 aaPredicted RBP15.5■□□□□ 0.07
RNF13-201ENST00000344229 RRP9O43818 475 aaKnown RBP15.49■□□□□ 0.07
RNF13-201ENST00000344229 USP42Q9H9J4 1324 aaKnown RBP15.49■□□□□ 0.07
RNF13-201ENST00000344229 A0A0U1RQG5 324 aaPredicted RBP15.49■□□□□ 0.07
RNF13-201ENST00000344229 SNRPA1P09661 255 aaKnown RBP15.49■□□□□ 0.07
RNF13-201ENST00000344229 OS9Q13438 667 aaPredicted RBP15.49■□□□□ 0.07
RNF13-201ENST00000344229 HSP90AB4PQ58FF6 505 aa15.49■□□□□ 0.07
RNF13-201ENST00000344229 GZF1Q9H116 711 aaPredicted RBP15.49■□□□□ 0.07
RNF13-201ENST00000344229 SOS2Q07890 1332 aaPredicted RBP15.48■□□□□ 0.07
RNF13-201ENST00000344229 NEURL1BA8MQ27 555 aa15.48■□□□□ 0.07
RNF13-201ENST00000344229 ST18O60284 1047 aa15.48■□□□□ 0.07
RNF13-201ENST00000344229 ZGPATQ8N5A5 531 aaKnown RBP15.48■□□□□ 0.07
RNF13-201ENST00000344229 SLAIN2Q9P270 581 aa15.48■□□□□ 0.07
RNF13-201ENST00000344229 PLEKHG2Q9H7P9 1386 aa15.48■□□□□ 0.07
RNF13-201ENST00000344229 CABP4P57796 275 aa15.48■□□□□ 0.07
RNF13-201ENST00000344229 LARP1Q6PKG0 1096 aaKnown RBP15.48■□□□□ 0.07
RNF13-201ENST00000344229 UBR2Q8IWV8 1755 aa15.48■□□□□ 0.07
RNF13-201ENST00000344229 KDM4FA0A1W2PPD8 638 aa15.47■□□□□ 0.07
RNF13-201ENST00000344229 PKP1Q13835 747 aa15.47■□□□□ 0.07
RNF13-201ENST00000344229 EPHA10Q5JZY3 1008 aa15.47■□□□□ 0.07
RNF13-201ENST00000344229 TTC5Q8N0Z6 440 aa15.47■□□□□ 0.07
RNF13-201ENST00000344229 MYD88Q99836 296 aa15.47■□□□□ 0.07
RNF13-201ENST00000344229 WDR17Q8IZU2 1322 aa15.47■□□□□ 0.07
RNF13-201ENST00000344229 DDX11L8A8MPP1 907 aa15.47■□□□□ 0.07
RNF13-201ENST00000344229 SASH1O94885 1247 aa15.47■□□□□ 0.07
RNF13-201ENST00000344229 NEK4P51957 841 aa15.47■□□□□ 0.07
RNF13-201ENST00000344229 JARID2Q92833 1246 aaPredicted RBP15.47■□□□□ 0.07
RNF13-201ENST00000344229 FMNL2Q96PY5 1086 aa15.47■□□□□ 0.07
RNF13-201ENST00000344229 METTL22Q9BUU2 404 aaPredicted RBP15.47■□□□□ 0.07
RNF13-201ENST00000344229 PRDM11Q9NQV5 511 aa15.47■□□□□ 0.07
RNF13-201ENST00000344229 COL5A2P05997 1499 aaPredicted RBP15.47■□□□□ 0.07
RNF13-201ENST00000344229 GCKRQ14397 625 aa15.46■□□□□ 0.07
RNF13-201ENST00000344229 KLHDC4Q8TBB5 520 aa15.46■□□□□ 0.07
RNF13-201ENST00000344229 ANKRD13DQ6ZTN6 518 aa15.46■□□□□ 0.06
RNF13-201ENST00000344229 TOM1L2Q6ZVM7 507 aa15.46■□□□□ 0.06
RNF13-201ENST00000344229 TTC41PQ6P2S7 1318 aa15.45■□□□□ 0.06
RNF13-201ENST00000344229 RBM10P98175 930 aaKnown RBP15.45■□□□□ 0.06
RNF13-201ENST00000344229 CLASRPQ8N2M8 674 aaKnown RBP15.45■□□□□ 0.06
RNF13-201ENST00000344229 IL17RAQ96F46 866 aa15.45■□□□□ 0.06
RNF13-201ENST00000344229 CYP2E1P05181 493 aaPredicted RBP15.45■□□□□ 0.06
RNF13-201ENST00000344229 GBP4Q96PP9 640 aa15.45■□□□□ 0.06
RNF13-201ENST00000344229 SGSM2O43147 1006 aa15.44■□□□□ 0.06
RNF13-201ENST00000344229 CNTROBQ8N137 903 aa15.44■□□□□ 0.06
RNF13-201ENST00000344229 NAP1L5Q96NT1 182 aaPredicted RBP15.44■□□□□ 0.06
RNF13-201ENST00000344229 PAPPAQ13219 1627 aa15.44■□□□□ 0.06
RNF13-201ENST00000344229 HSPA4P34932 840 aa15.44■□□□□ 0.06
RNF13-201ENST00000344229 ANAPC15P60006 121 aa15.44■□□□□ 0.06
RNF13-201ENST00000344229 NEXNQ0ZGT2 675 aa15.44■□□□□ 0.06
RNF13-201ENST00000344229 ZCRB1Q8TBF4 217 aaKnown RBP15.44■□□□□ 0.06
RNF13-201ENST00000344229 EAF2Q96CJ1 260 aaPredicted RBP15.44■□□□□ 0.06
RNF13-201ENST00000344229 CLEC17AQ6ZS10 378 aa15.43■□□□□ 0.06
RNF13-201ENST00000344229 AACSQ86V21 672 aa15.43■□□□□ 0.06
RNF13-201ENST00000344229 SIL1Q9H173 461 aa15.43■□□□□ 0.06
RNF13-201ENST00000344229 ECHDC1Q9NTX5 307 aa15.43■□□□□ 0.06
RNF13-201ENST00000344229 HDAC5Q9UQL6 1122 aa15.43■□□□□ 0.06
RNF13-201ENST00000344229 NUP188Q5SRE5 1749 aa15.43■□□□□ 0.06
RNF13-201ENST00000344229 NBPF26B4DH59 902 aa15.43■□□□□ 0.06
RNF13-201ENST00000344229 GLRX3O76003 335 aaKnown RBP15.43■□□□□ 0.06
RNF13-201ENST00000344229 MCCP23508 829 aa15.43■□□□□ 0.06
RNF13-201ENST00000344229 NBPF14Q5TI25 921 aa15.43■□□□□ 0.06
RNF13-201ENST00000344229 NBPF10Q6P3W6 841 aaKnown RBP15.43■□□□□ 0.06
RNF13-201ENST00000344229 CWC27Q6UX04 472 aaKnown RBP15.43■□□□□ 0.06
RNF13-201ENST00000344229 ERC1Q8IUD2 1116 aa15.43■□□□□ 0.06
RNF13-201ENST00000344229 NBPF15Q8N660 670 aa15.43■□□□□ 0.06
RNF13-201ENST00000344229 TMX3Q96JJ7 454 aa15.43■□□□□ 0.06
RNF13-201ENST00000344229 LSG1Q9H089 658 aaKnown RBP15.43■□□□□ 0.06
RNF13-201ENST00000344229 TLR7Q9NYK1 1049 aaKnown RBP15.42■□□□□ 0.06
RNF13-201ENST00000344229 ZDHHC9Q9Y397 364 aa15.42■□□□□ 0.06
RNF13-201ENST00000344229 PCDH11XQ9BZA7 1347 aa15.42■□□□□ 0.06
RNF13-201ENST00000344229 PCDH11YQ9BZA8 1340 aa15.42■□□□□ 0.06
RNF13-201ENST00000344229 KCPQ6ZWJ8 1503 aa15.42■□□□□ 0.06
RNF13-201ENST00000344229 ATP5J2-PTCD1G3V325 749 aa15.42■□□□□ 0.06
RNF13-201ENST00000344229 PTCD1O75127 700 aaKnown RBP15.42■□□□□ 0.06
RNF13-201ENST00000344229 BAG4O95429 457 aaKnown RBP15.42■□□□□ 0.06
RNF13-201ENST00000344229 IFIT2P09913 472 aaKnown RBP15.42■□□□□ 0.06
RNF13-201ENST00000344229 UPF3BQ9BZI7 483 aaKnown RBP15.42■□□□□ 0.06
RNF13-201ENST00000344229 TOGARAM1Q9Y4F4 1720 aa15.42■□□□□ 0.06
RNF13-201ENST00000344229 FSD2A1L4K1 749 aa15.42■□□□□ 0.06
RNF13-201ENST00000344229 CCDC8Q9H0W5 538 aaPredicted RBP15.42■□□□□ 0.06
RNF13-201ENST00000344229 NHSL1Q5SYE7 1610 aa15.41■□□□□ 0.06
RNF13-201ENST00000344229 G3BP1Q13283 466 aaKnown RBP eCLIP15.41■□□□□ 0.06
RNF13-201ENST00000344229 RAD50Q92878 1312 aa15.41■□□□□ 0.06
RNF13-201ENST00000344229 NOL8Q76FK4 1167 aaKnown RBP15.41■□□□□ 0.06
RNF13-201ENST00000344229 CWC22Q9HCG8 908 aaKnown RBP15.41■□□□□ 0.06
RNF13-201ENST00000344229 STRN4Q9NRL3 753 aa15.4■□□□□ 0.06
RNF13-201ENST00000344229 RFX5P48382 616 aaPredicted RBP15.4■□□□□ 0.06
RNF13-201ENST00000344229 RASEFQ8IZ41 740 aa15.4■□□□□ 0.06
RNF13-201ENST00000344229 ARXQ96QS3 562 aa15.4■□□□□ 0.06
RNF13-201ENST00000344229 TJP1Q07157 1748 aa15.4■□□□□ 0.06
RNF13-201ENST00000344229 EPB41L2O43491 1005 aaKnown RBP15.39■□□□□ 0.05
RNF13-201ENST00000344229 NUCB2P80303 420 aa15.39■□□□□ 0.05
RNF13-201ENST00000344229 NKX1-1Q15270 411 aaPredicted RBP15.39■□□□□ 0.05
RNF13-201ENST00000344229 UBE3BQ7Z3V4 1068 aa15.39■□□□□ 0.05
RNF13-201ENST00000344229 DDX54Q8TDD1 881 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms