RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 POTECB2RU33 542 aa17.48■□□□□ 0.39
HERPUD1-202ENST00000344114 NEFMP07197 916 aa17.48■□□□□ 0.39
HERPUD1-202ENST00000344114 RSPH6AQ9H0K4 717 aa17.48■□□□□ 0.39
HERPUD1-202ENST00000344114 CAPN15O75808 1086 aa17.47■□□□□ 0.39
HERPUD1-202ENST00000344114 HSPA1AP0DMV8 641 aaKnown RBP17.47■□□□□ 0.39
HERPUD1-202ENST00000344114 HSPA1BP0DMV9 641 aaKnown RBP17.47■□□□□ 0.39
HERPUD1-202ENST00000344114 C2CD5Q86YS7 1000 aa17.47■□□□□ 0.39
HERPUD1-202ENST00000344114 TMPOP42166 694 aaKnown RBP17.46■□□□□ 0.39
HERPUD1-202ENST00000344114 RRP1P56182 461 aaKnown RBP17.46■□□□□ 0.39
HERPUD1-202ENST00000344114 H0YIN7 160 aa17.45■□□□□ 0.38
HERPUD1-202ENST00000344114 RRP7AQ9Y3A4 280 aaKnown RBP17.45■□□□□ 0.38
HERPUD1-202ENST00000344114 ARFGEF2Q9Y6D5 1785 aa17.45■□□□□ 0.38
HERPUD1-202ENST00000344114 SIPA1L3O60292 1781 aaPredicted RBP17.44■□□□□ 0.38
HERPUD1-202ENST00000344114 IRX6P78412 446 aaPredicted RBP17.44■□□□□ 0.38
HERPUD1-202ENST00000344114 CACNA1SQ13698 1873 aa17.44■□□□□ 0.38
HERPUD1-202ENST00000344114 PRKAR2BP31323 418 aa17.43■□□□□ 0.38
HERPUD1-202ENST00000344114 EIF5P55010 431 aaKnown RBP17.43■□□□□ 0.38
HERPUD1-202ENST00000344114 NEUROD2Q15784 382 aa17.43■□□□□ 0.38
HERPUD1-202ENST00000344114 DPY19L2Q6NUT2 758 aa17.43■□□□□ 0.38
HERPUD1-202ENST00000344114 PDZRN3Q9UPQ7 1066 aa17.43■□□□□ 0.38
HERPUD1-202ENST00000344114 CANXP27824 592 aaKnown RBP17.42■□□□□ 0.38
HERPUD1-202ENST00000344114 MTHFSDQ2M296 383 aaKnown RBP17.42■□□□□ 0.38
HERPUD1-202ENST00000344114 IL16Q14005 1332 aa17.42■□□□□ 0.38
HERPUD1-202ENST00000344114 LTBP3Q9NS15 1303 aa17.42■□□□□ 0.38
HERPUD1-202ENST00000344114 A0A087WZG4 1122 aa17.41■□□□□ 0.38
HERPUD1-202ENST00000344114 HMOX1P09601 288 aa17.41■□□□□ 0.38
HERPUD1-202ENST00000344114 TBC1D9BQ66K14 1250 aa17.41■□□□□ 0.38
HERPUD1-202ENST00000344114 BCORQ6W2J9 1755 aa17.41■□□□□ 0.38
HERPUD1-202ENST00000344114 BICDL1Q6ZP65 573 aa17.4■□□□□ 0.38
HERPUD1-202ENST00000344114 BRIP1Q9BX63 1249 aa17.4■□□□□ 0.38
HERPUD1-202ENST00000344114 MYH16Q9H6N6 1097 aa17.4■□□□□ 0.38
HERPUD1-202ENST00000344114 SPINK5Q9NQ38 1064 aaPredicted RBP17.4■□□□□ 0.38
HERPUD1-202ENST00000344114 PPP4R2Q9NY27 417 aa17.4■□□□□ 0.38
HERPUD1-202ENST00000344114 SLX4Q8IY92 1834 aa17.4■□□□□ 0.38
HERPUD1-202ENST00000344114 C21orf2O43822 256 aa17.4■□□□□ 0.38
HERPUD1-202ENST00000344114 STARD3NLO95772 234 aa17.4■□□□□ 0.38
HERPUD1-202ENST00000344114 PDE6BP35913 854 aa17.4■□□□□ 0.38
HERPUD1-202ENST00000344114 NFE2L2Q16236 605 aa17.4■□□□□ 0.38
HERPUD1-202ENST00000344114 ERFEQ4G0M1 354 aa17.4■□□□□ 0.38
HERPUD1-202ENST00000344114 PRR5LQ6MZQ0 368 aa17.4■□□□□ 0.38
HERPUD1-202ENST00000344114 CREBZFQ9NS37 354 aa17.4■□□□□ 0.38
HERPUD1-202ENST00000344114 RIPK4P57078 832 aa17.39■□□□□ 0.37
HERPUD1-202ENST00000344114 ZNF622Q969S3 477 aaKnown RBP eCLIP17.39■□□□□ 0.372e-6■■□□□ 11.7
HERPUD1-202ENST00000344114 TRIM35Q9UPQ4 493 aa17.39■□□□□ 0.37
HERPUD1-202ENST00000344114 SCN4AP35499 1836 aa17.38■□□□□ 0.37
HERPUD1-202ENST00000344114 HEG1Q9ULI3 1381 aa17.38■□□□□ 0.37
HERPUD1-202ENST00000344114 CHADLQ6NUI6 762 aa17.38■□□□□ 0.37
HERPUD1-202ENST00000344114 TTC5Q8N0Z6 440 aa17.38■□□□□ 0.37
HERPUD1-202ENST00000344114 LMOD3Q0VAK6 560 aa17.37■□□□□ 0.37
HERPUD1-202ENST00000344114 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.37■□□□□ 0.37
HERPUD1-202ENST00000344114 ZNF496Q96IT1 587 aaPredicted RBP17.37■□□□□ 0.37
HERPUD1-202ENST00000344114 TEX13AQ9BXU3 409 aaPredicted RBP17.37■□□□□ 0.37
HERPUD1-202ENST00000344114 CACNA1FO60840 1977 aa17.37■□□□□ 0.37
HERPUD1-202ENST00000344114 IL6STP40189 918 aaPredicted RBP17.36■□□□□ 0.37
HERPUD1-202ENST00000344114 ZNF790Q6PG37 636 aa17.36■□□□□ 0.37
HERPUD1-202ENST00000344114 TAOK3Q9H2K8 898 aa17.36■□□□□ 0.37
HERPUD1-202ENST00000344114 ZNF219Q9P2Y4 722 aaPredicted RBP17.36■□□□□ 0.37
HERPUD1-202ENST00000344114 POTEIP0CG38 1075 aa17.35■□□□□ 0.37
HERPUD1-202ENST00000344114 POTEJP0CG39 1038 aa17.35■□□□□ 0.37
HERPUD1-202ENST00000344114 CALD1Q05682 793 aaKnown RBP17.35■□□□□ 0.37
HERPUD1-202ENST00000344114 CCDC24Q8N4L8 307 aa17.35■□□□□ 0.37
HERPUD1-202ENST00000344114 TBC1D2BQ9UPU7 963 aa17.35■□□□□ 0.37
HERPUD1-202ENST00000344114 DDNO94850 711 aaPredicted RBP17.34■□□□□ 0.37
HERPUD1-202ENST00000344114 CT47B1P0C2W7 299 aaPredicted RBP17.34■□□□□ 0.37
HERPUD1-202ENST00000344114 STYK1Q6J9G0 422 aa17.34■□□□□ 0.37
HERPUD1-202ENST00000344114 CNKSR1Q969H4 720 aa17.34■□□□□ 0.37
HERPUD1-202ENST00000344114 MKRN1Q9UHC7 482 aaKnown RBP17.34■□□□□ 0.37
HERPUD1-202ENST00000344114 PASKQ96RG2 1323 aa17.34■□□□□ 0.37
HERPUD1-202ENST00000344114 CNTNAP1P78357 1384 aa17.33■□□□□ 0.37
HERPUD1-202ENST00000344114 SRGNP10124 158 aa17.33■□□□□ 0.36
HERPUD1-202ENST00000344114 IL17REQ8NFR9 667 aa17.33■□□□□ 0.36
HERPUD1-202ENST00000344114 PHACTR3Q96KR7 559 aa17.33■□□□□ 0.36
HERPUD1-202ENST00000344114 ADAMTSL1Q8N6G6 1762 aa17.32■□□□□ 0.36
HERPUD1-202ENST00000344114 CAMTA2O94983 1202 aa17.32■□□□□ 0.36
HERPUD1-202ENST00000344114 TEFQ10587 303 aa17.32■□□□□ 0.36
HERPUD1-202ENST00000344114 SOGA3Q5TF21 947 aa17.32■□□□□ 0.36
HERPUD1-202ENST00000344114 PRPF40BQ6NWY9 871 aaKnown RBP17.32■□□□□ 0.36
HERPUD1-202ENST00000344114 CNBD1Q8NA66 436 aa17.32■□□□□ 0.36
HERPUD1-202ENST00000344114 L3MBTL3Q96JM7 780 aaPredicted RBP17.32■□□□□ 0.36
HERPUD1-202ENST00000344114 SETDB2Q96T68 719 aa17.32■□□□□ 0.36
HERPUD1-202ENST00000344114 FANCIQ9NVI1 1328 aa17.32■□□□□ 0.36
HERPUD1-202ENST00000344114 MASTLQ96GX5 879 aa17.31■□□□□ 0.36
HERPUD1-202ENST00000344114 ZNF330Q9Y3S2 320 aaPredicted RBP17.31■□□□□ 0.36
HERPUD1-202ENST00000344114 CEMIPQ8WUJ3 1361 aa17.31■□□□□ 0.36
HERPUD1-202ENST00000344114 IQCA1LA6NCM1 817 aa17.3■□□□□ 0.36
HERPUD1-202ENST00000344114 GNAT3A8MTJ3 354 aa17.3■□□□□ 0.36
HERPUD1-202ENST00000344114 FOXN1O15353 648 aa17.3■□□□□ 0.36
HERPUD1-202ENST00000344114 A1BGP04217 495 aa17.3■□□□□ 0.36
HERPUD1-202ENST00000344114 ST5P78524 1137 aa17.3■□□□□ 0.36
HERPUD1-202ENST00000344114 LDHDQ86WU2 507 aa17.3■□□□□ 0.36
HERPUD1-202ENST00000344114 GAS2L2Q8NHY3 880 aa17.3■□□□□ 0.36
HERPUD1-202ENST00000344114 FMNL2Q96PY5 1086 aa17.3■□□□□ 0.36
HERPUD1-202ENST00000344114 C7orf43Q8WVR3 580 aa17.29■□□□□ 0.36
HERPUD1-202ENST00000344114 PRDM10Q9NQV6 1147 aa17.29■□□□□ 0.36
HERPUD1-202ENST00000344114 TAF1DQ9H5J8 278 aaPredicted RBP17.28■□□□□ 0.36
HERPUD1-202ENST00000344114 DZIP3Q86Y13 1208 aaKnown RBP17.28■□□□□ 0.36
HERPUD1-202ENST00000344114 NPHP1O15259 732 aa17.27■□□□□ 0.35
HERPUD1-202ENST00000344114 ITGBL1O95965 494 aaPredicted RBP17.27■□□□□ 0.35
HERPUD1-202ENST00000344114 GNAI1P63096 354 aa17.27■□□□□ 0.35
HERPUD1-202ENST00000344114 CCDC93Q567U6 631 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 214.7 ms