RNA–Protein interactions for RNA: ENST00000343304.10

LRRC41-201, Transcript of leucine rich repeat containing 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC41, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC41-201ENST00000343304 IL25Q9H293 177 aa17.87■□□□□ 0.45
LRRC41-201ENST00000343304 UPF3BQ9BZI7 483 aaKnown RBP17.86■□□□□ 0.45
LRRC41-201ENST00000343304 LSG1Q9H089 658 aaKnown RBP17.86■□□□□ 0.45
LRRC41-201ENST00000343304 GLRX3O76003 335 aaKnown RBP17.86■□□□□ 0.45
LRRC41-201ENST00000343304 ZNF530Q6P9A1 599 aaPredicted RBP17.86■□□□□ 0.45
LRRC41-201ENST00000343304 ADCY9O60503 1353 aa17.86■□□□□ 0.45
LRRC41-201ENST00000343304 SYAP1Q96A49 352 aaPredicted RBP17.85■□□□□ 0.45
LRRC41-201ENST00000343304 SNX14Q9Y5W7 946 aa17.85■□□□□ 0.45
LRRC41-201ENST00000343304 KCNQ3O43525 872 aa17.85■□□□□ 0.45
LRRC41-201ENST00000343304 KIAA1211Q6ZU35 1233 aa17.85■□□□□ 0.45
LRRC41-201ENST00000343304 RNMTO43148 476 aaKnown RBP17.84■□□□□ 0.45
LRRC41-201ENST00000343304 FOXD4L5Q5VV16 416 aaPredicted RBP17.84■□□□□ 0.45
LRRC41-201ENST00000343304 FOXD4L4Q8WXT5 416 aaPredicted RBP17.84■□□□□ 0.45
LRRC41-201ENST00000343304 TTC14Q96N46 770 aa17.84■□□□□ 0.45
LRRC41-201ENST00000343304 ROBO1Q9Y6N7 1651 aa17.84■□□□□ 0.45
LRRC41-201ENST00000343304 ERC1Q8IUD2 1116 aa17.84■□□□□ 0.45
LRRC41-201ENST00000343304 RUFY2Q8WXA3 655 aa17.84■□□□□ 0.45
LRRC41-201ENST00000343304 NSFL1CQ9UNZ2 370 aaKnown RBP17.84■□□□□ 0.45
LRRC41-201ENST00000343304 HEG1Q9ULI3 1381 aa17.83■□□□□ 0.45
LRRC41-201ENST00000343304 NOL8Q76FK4 1167 aaKnown RBP17.83■□□□□ 0.45
LRRC41-201ENST00000343304 MAP4K4O95819 1239 aaPredicted RBP17.83■□□□□ 0.44
LRRC41-201ENST00000343304 CLASRPQ8N2M8 674 aaKnown RBP17.83■□□□□ 0.44
LRRC41-201ENST00000343304 CHAMP1Q96JM3 812 aa17.83■□□□□ 0.44
LRRC41-201ENST00000343304 SYCE3A1L190 88 aa17.82■□□□□ 0.44
LRRC41-201ENST00000343304 C1orf141Q5JVX7 400 aa17.82■□□□□ 0.44
LRRC41-201ENST00000343304 KSR2Q6VAB6 950 aa17.82■□□□□ 0.44
LRRC41-201ENST00000343304 MSNP26038 577 aaKnown RBP17.82■□□□□ 0.44
LRRC41-201ENST00000343304 OS9Q13438 667 aaPredicted RBP17.82■□□□□ 0.44
LRRC41-201ENST00000343304 MPRIPQ6WCQ1 1025 aa17.82■□□□□ 0.44
LRRC41-201ENST00000343304 TMEM87AQ8NBN3 555 aa17.82■□□□□ 0.44
LRRC41-201ENST00000343304 GPATCH3Q96I76 525 aa17.82■□□□□ 0.44
LRRC41-201ENST00000343304 LIMCH1Q9UPQ0 1083 aa17.82■□□□□ 0.44
LRRC41-201ENST00000343304 GIGYF1O75420 1035 aaPredicted RBP17.81■□□□□ 0.44
LRRC41-201ENST00000343304 PHF14O94880 888 aa17.81■□□□□ 0.44
LRRC41-201ENST00000343304 ECHDC1Q9NTX5 307 aa17.81■□□□□ 0.44
LRRC41-201ENST00000343304 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.81■□□□□ 0.44
LRRC41-201ENST00000343304 LRRC59Q96AG4 307 aaKnown RBP17.8■□□□□ 0.44
LRRC41-201ENST00000343304 HYPKQ9NX55 129 aa17.8■□□□□ 0.44
LRRC41-201ENST00000343304 C9orf78Q9NZ63 289 aaPredicted RBP17.8■□□□□ 0.44
LRRC41-201ENST00000343304 NOL7Q9UMY1 257 aaKnown RBP17.8■□□□□ 0.44
LRRC41-201ENST00000343304 MAP3K2Q9Y2U5 619 aa17.8■□□□□ 0.44
LRRC41-201ENST00000343304 RGPD2P0DJD1 1756 aa17.8■□□□□ 0.44
LRRC41-201ENST00000343304 KCNB2Q92953 911 aa17.8■□□□□ 0.44
LRRC41-201ENST00000343304 DIAPH3Q9NSV4 1193 aa17.8■□□□□ 0.44
LRRC41-201ENST00000343304 CWC27Q6UX04 472 aaKnown RBP17.79■□□□□ 0.44
LRRC41-201ENST00000343304 ADAMTS7Q9UKP4 1686 aa17.79■□□□□ 0.44
LRRC41-201ENST00000343304 ANXA1P04083 346 aa17.79■□□□□ 0.44
LRRC41-201ENST00000343304 RASEFQ8IZ41 740 aa17.79■□□□□ 0.44
LRRC41-201ENST00000343304 TM6SF1Q9BZW5 370 aa17.79■□□□□ 0.44
LRRC41-201ENST00000343304 UTYO14607 1347 aa17.78■□□□□ 0.44
LRRC41-201ENST00000343304 AK2P54819 239 aa17.78■□□□□ 0.44
LRRC41-201ENST00000343304 KLHL34Q8N239 644 aa17.78■□□□□ 0.44
LRRC41-201ENST00000343304 RPAP1Q9BWH6 1393 aaPredicted RBP17.78■□□□□ 0.44
LRRC41-201ENST00000343304 TSPY26PQ9H489 355 aa17.78■□□□□ 0.44
LRRC41-201ENST00000343304 ERBB3P21860 1342 aa17.78■□□□□ 0.44
LRRC41-201ENST00000343304 MCM5P33992 734 aa17.78■□□□□ 0.44
LRRC41-201ENST00000343304 USP48Q86UV5 1035 aa17.78■□□□□ 0.44
LRRC41-201ENST00000343304 OFD1O75665 1012 aa17.78■□□□□ 0.44
LRRC41-201ENST00000343304 XPCQ01831 940 aaPredicted RBP17.78■□□□□ 0.44
LRRC41-201ENST00000343304 RUFY3Q7L099 469 aa17.78■□□□□ 0.44
LRRC41-201ENST00000343304 LINS1Q8NG48 757 aa17.78■□□□□ 0.44
LRRC41-201ENST00000343304 EVI5LQ96CN4 794 aa17.78■□□□□ 0.44
LRRC41-201ENST00000343304 ZBTB7CA1YPR0 619 aa17.77■□□□□ 0.44
LRRC41-201ENST00000343304 TPM2P07951 284 aa17.77■□□□□ 0.44
LRRC41-201ENST00000343304 IFIT2P09913 472 aaKnown RBP17.77■□□□□ 0.44
LRRC41-201ENST00000343304 ZSCAN22P10073 491 aaPredicted RBP17.77■□□□□ 0.44
LRRC41-201ENST00000343304 ZSCAN31Q96LW9 406 aaPredicted RBP17.77■□□□□ 0.44
LRRC41-201ENST00000343304 RGPD5Q99666 1765 aa17.77■□□□□ 0.44
LRRC41-201ENST00000343304 ZNF500O60304 480 aaPredicted RBP17.77■□□□□ 0.43
LRRC41-201ENST00000343304 HIP1O00291 1037 aa17.76■□□□□ 0.43
LRRC41-201ENST00000343304 DDX58O95786 925 aaKnown RBP17.76■□□□□ 0.43
LRRC41-201ENST00000343304 VPS53Q5VIR6 699 aa17.76■□□□□ 0.43
LRRC41-201ENST00000343304 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.76■□□□□ 0.431e-6■■□□□ 14.2
LRRC41-201ENST00000343304 SPG7Q9UQ90 795 aa17.76■□□□□ 0.43
LRRC41-201ENST00000343304 ATP6V1DQ9Y5K8 247 aa17.76■□□□□ 0.43
LRRC41-201ENST00000343304 ANKRD24Q8TF21 1146 aa17.76■□□□□ 0.43
LRRC41-201ENST00000343304 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.75■□□□□ 0.43
LRRC41-201ENST00000343304 STX6O43752 255 aa17.75■□□□□ 0.43
LRRC41-201ENST00000343304 LETM1O95202 739 aaPredicted RBP17.75■□□□□ 0.43
LRRC41-201ENST00000343304 TERF1P54274 439 aa17.75■□□□□ 0.43
LRRC41-201ENST00000343304 ZSWIM6Q9HCJ5 1215 aa17.75■□□□□ 0.43
LRRC41-201ENST00000343304 DDX21Q9NR30 783 aaKnown RBP eCLIP17.75■□□□□ 0.43
LRRC41-201ENST00000343304 SH2B1Q9NRF2 756 aaPredicted RBP17.75■□□□□ 0.43
LRRC41-201ENST00000343304 CCDC39Q9UFE4 941 aa17.75■□□□□ 0.43
LRRC41-201ENST00000343304 SMC3Q9UQE7 1217 aa17.75■□□□□ 0.43
LRRC41-201ENST00000343304 COL14A1Q05707 1796 aaKnown RBP17.75■□□□□ 0.43
LRRC41-201ENST00000343304 COL16A1Q07092 1604 aaPredicted RBP17.75■□□□□ 0.43
LRRC41-201ENST00000343304 PKD1L3Q7Z443 1732 aa17.75■□□□□ 0.43
LRRC41-201ENST00000343304 GRM8O00222 908 aa17.75■□□□□ 0.43
LRRC41-201ENST00000343304 GADD45BO75293 160 aaPredicted RBP17.75■□□□□ 0.43
LRRC41-201ENST00000343304 PROSER3Q2NL68 480 aa17.75■□□□□ 0.43
LRRC41-201ENST00000343304 CASTP20810 708 aaKnown RBP17.74■□□□□ 0.43
LRRC41-201ENST00000343304 FAM184AQ8NB25 1140 aa17.74■□□□□ 0.43
LRRC41-201ENST00000343304 SIPA1L3O60292 1781 aaPredicted RBP17.74■□□□□ 0.43
LRRC41-201ENST00000343304 SYT1P21579 422 aa17.74■□□□□ 0.43
LRRC41-201ENST00000343304 UVSSAQ2YD98 709 aa17.74■□□□□ 0.43
LRRC41-201ENST00000343304 PDIA4P13667 645 aaKnown RBP17.73■□□□□ 0.43
LRRC41-201ENST00000343304 PTH1RQ03431 593 aa17.73■□□□□ 0.43
LRRC41-201ENST00000343304 LMOD2Q6P5Q4 547 aa17.73■□□□□ 0.43
LRRC41-201ENST00000343304 SNRKQ9NRH2 765 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms