RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 SYAP1Q96A49 352 aaPredicted RBP28.92■■■□□ 2.22
NELFB-201ENST00000343053 PSME1Q06323 249 aa28.92■■■□□ 2.22
NELFB-201ENST00000343053 SMC3Q9UQE7 1217 aa28.92■■■□□ 2.22
NELFB-201ENST00000343053 CLASRPQ8N2M8 674 aaKnown RBP28.91■■■□□ 2.22
NELFB-201ENST00000343053 LIMCH1Q9UPQ0 1083 aa28.91■■■□□ 2.22
NELFB-201ENST00000343053 STX6O43752 255 aa28.91■■■□□ 2.22
NELFB-201ENST00000343053 ZSCAN22P10073 491 aaPredicted RBP28.91■■■□□ 2.22
NELFB-201ENST00000343053 PXDNQ92626 1479 aa28.91■■■□□ 2.22
NELFB-201ENST00000343053 TPM2P07951 284 aa28.9■■■□□ 2.22
NELFB-201ENST00000343053 SIL1Q9H173 461 aa28.9■■■□□ 2.22
NELFB-201ENST00000343053 AACSQ86V21 672 aa28.9■■■□□ 2.22
NELFB-201ENST00000343053 GLRX3O76003 335 aaKnown RBP28.89■■■□□ 2.22
NELFB-201ENST00000343053 HS1BP3Q53T59 392 aa28.89■■■□□ 2.22
NELFB-201ENST00000343053 IL17RAQ96F46 866 aa28.89■■■□□ 2.22
NELFB-201ENST00000343053 IFIT2P09913 472 aaKnown RBP28.89■■■□□ 2.22
NELFB-201ENST00000343053 USP25Q9UHP3 1055 aa28.89■■■□□ 2.22
NELFB-201ENST00000343053 NECAB1Q8N987 351 aa28.88■■■□□ 2.21
NELFB-201ENST00000343053 TCEANC2Q96MN5 208 aa28.88■■■□□ 2.21
NELFB-201ENST00000343053 ZNF830Q96NB3 372 aaPredicted RBP28.88■■■□□ 2.21
NELFB-201ENST00000343053 RRP9O43818 475 aaKnown RBP28.88■■■□□ 2.21
NELFB-201ENST00000343053 CCDC8Q9H0W5 538 aaPredicted RBP28.88■■■□□ 2.21
NELFB-201ENST00000343053 HCLS1P14317 486 aaPredicted RBP28.87■■■□□ 2.21
NELFB-201ENST00000343053 FAM227BQ96M60 508 aa28.87■■■□□ 2.21
NELFB-201ENST00000343053 CCDC39Q9UFE4 941 aa28.87■■■□□ 2.21
NELFB-201ENST00000343053 KLHDC4Q8TBB5 520 aa28.87■■■□□ 2.21
NELFB-201ENST00000343053 KDM3BQ7LBC6 1761 aa28.87■■■□□ 2.21
NELFB-201ENST00000343053 GJB2P29033 226 aa28.87■■■□□ 2.21
NELFB-201ENST00000343053 TLR7Q9NYK1 1049 aaKnown RBP28.87■■■□□ 2.21
NELFB-201ENST00000343053 DBF4Q9UBU7 674 aaPredicted RBP28.87■■■□□ 2.21
NELFB-201ENST00000343053 VPS37CA5D8V6 355 aaPredicted RBP28.86■■■□□ 2.21
NELFB-201ENST00000343053 PLCB2Q00722 1185 aa28.86■■■□□ 2.21
NELFB-201ENST00000343053 ECHDC1Q9NTX5 307 aa28.86■■■□□ 2.21
NELFB-201ENST00000343053 HYPKQ9NX55 129 aa28.86■■■□□ 2.21
NELFB-201ENST00000343053 ZNF500O60304 480 aaPredicted RBP28.86■■■□□ 2.21
NELFB-201ENST00000343053 KCNJ4P48050 445 aa28.86■■■□□ 2.21
NELFB-201ENST00000343053 HSP90AB4PQ58FF6 505 aa28.86■■■□□ 2.21
NELFB-201ENST00000343053 AKAP4Q5JQC9 854 aa28.86■■■□□ 2.21
NELFB-201ENST00000343053 C1orf141Q5JVX7 400 aa28.86■■■□□ 2.21
NELFB-201ENST00000343053 PDRG1Q9NUG6 133 aa28.86■■■□□ 2.21
NELFB-201ENST00000343053 F13A1P00488 732 aa28.85■■■□□ 2.21
NELFB-201ENST00000343053 DNM1Q05193 864 aaKnown RBP28.85■■■□□ 2.21
NELFB-201ENST00000343053 FER1L4A9Z1Z3 1794 aa28.84■■■□□ 2.21
NELFB-201ENST00000343053 RNMTO43148 476 aaKnown RBP28.84■■■□□ 2.21
NELFB-201ENST00000343053 CHMP3Q9Y3E7 222 aa28.84■■■□□ 2.21
NELFB-201ENST00000343053 MED1Q15648 1581 aaPredicted RBP28.84■■■□□ 2.21
NELFB-201ENST00000343053 SUCLG2Q96I99 432 aa28.84■■■□□ 2.21
NELFB-201ENST00000343053 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.84■■■□□ 2.21
NELFB-201ENST00000343053 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.83■■■□□ 2.21
NELFB-201ENST00000343053 NFAT5O94916 1531 aa28.83■■■□□ 2.21
NELFB-201ENST00000343053 TTC41PQ6P2S7 1318 aa28.83■■■□□ 2.21
NELFB-201ENST00000343053 PHF14O94880 888 aa28.83■■■□□ 2.21
NELFB-201ENST00000343053 PLEKHO1Q53GL0 409 aaPredicted RBP28.83■■■□□ 2.21
NELFB-201ENST00000343053 GIGYF1O75420 1035 aaPredicted RBP28.82■■■□□ 2.2
NELFB-201ENST00000343053 GIMAP6Q6P9H5 292 aa28.82■■■□□ 2.2
NELFB-201ENST00000343053 JARID2Q92833 1246 aaPredicted RBP28.82■■■□□ 2.2
NELFB-201ENST00000343053 ST3GAL1Q11201 340 aa28.82■■■□□ 2.2
NELFB-201ENST00000343053 CCDC183Q5T5S1 534 aa28.82■■■□□ 2.2
NELFB-201ENST00000343053 ARID3AQ99856 593 aa28.82■■■□□ 2.2
NELFB-201ENST00000343053 BICC1Q9H694 974 aaKnown RBP28.82■■■□□ 2.2
NELFB-201ENST00000343053 HOXB7P09629 217 aa28.81■■■□□ 2.2
NELFB-201ENST00000343053 FERMT3Q86UX7 667 aa28.81■■■□□ 2.2
NELFB-201ENST00000343053 TAF6LQ9Y6J9 622 aa28.81■■■□□ 2.2
NELFB-201ENST00000343053 ME3Q16798 604 aa28.8■■■□□ 2.2
NELFB-201ENST00000343053 FAM173BQ6P4H8 233 aa28.8■■■□□ 2.2
NELFB-201ENST00000343053 RUFY2Q8WXA3 655 aa28.8■■■□□ 2.2
NELFB-201ENST00000343053 EAF2Q96CJ1 260 aaPredicted RBP28.8■■■□□ 2.2
NELFB-201ENST00000343053 ORAI2Q96SN7 254 aa28.8■■■□□ 2.2
NELFB-201ENST00000343053 BOLA2Q9H3K6 86 aa28.8■■■□□ 2.2
NELFB-201ENST00000343053 RBM8AQ9Y5S9 174 aaKnown RBP28.8■■■□□ 2.2
NELFB-201ENST00000343053 PIP4K2AP48426 406 aaPredicted RBP28.8■■■□□ 2.2
NELFB-201ENST00000343053 NMIQ13287 307 aaPredicted RBP28.8■■■□□ 2.2
NELFB-201ENST00000343053 SLC39A6Q13433 755 aa28.8■■■□□ 2.2
NELFB-201ENST00000343053 KSR2Q6VAB6 950 aa28.8■■■□□ 2.2
NELFB-201ENST00000343053 C17orf53Q8N3J3 647 aaPredicted RBP28.8■■■□□ 2.2
NELFB-201ENST00000343053 FAM13BQ9NYF5 915 aa28.8■■■□□ 2.2
NELFB-201ENST00000343053 CYP46A1Q9Y6A2 500 aa28.8■■■□□ 2.2
NELFB-201ENST00000343053 UQCRHLA0A096LP55 91 aa28.79■■■□□ 2.2
NELFB-201ENST00000343053 UQCRHP07919 91 aa28.79■■■□□ 2.2
NELFB-201ENST00000343053 KAZALD1Q96I82 304 aa28.79■■■□□ 2.2
NELFB-201ENST00000343053 EPB41L2O43491 1005 aaKnown RBP28.79■■■□□ 2.2
NELFB-201ENST00000343053 SASH1O94885 1247 aa28.79■■■□□ 2.2
NELFB-201ENST00000343053 MYL6BP14649 208 aa28.79■■■□□ 2.2
NELFB-201ENST00000343053 EDC3Q96F86 508 aaKnown RBP28.79■■■□□ 2.2
NELFB-201ENST00000343053 PKNOX2Q96KN3 472 aa28.79■■■□□ 2.2
NELFB-201ENST00000343053 GPATCH3Q96I76 525 aa28.78■■■□□ 2.2
NELFB-201ENST00000343053 MTMR6Q9Y217 621 aa28.78■■■□□ 2.2
NELFB-201ENST00000343053 CCDC171Q6TFL3 1326 aa28.78■■■□□ 2.2
NELFB-201ENST00000343053 USP42Q9H9J4 1324 aaKnown RBP28.78■■■□□ 2.2
NELFB-201ENST00000343053 UBE2HP62256 183 aa28.77■■■□□ 2.2
NELFB-201ENST00000343053 ANKRD24Q8TF21 1146 aa28.77■■■□□ 2.2
NELFB-201ENST00000343053 TMEM87AQ8NBN3 555 aa28.77■■■□□ 2.2
NELFB-201ENST00000343053 NDUFB9Q9Y6M9 179 aa28.77■■■□□ 2.2
NELFB-201ENST00000343053 A0A0D9SFI3 127 aa28.77■■■□□ 2.2
NELFB-201ENST00000343053 GCP02774 474 aa28.77■■■□□ 2.2
NELFB-201ENST00000343053 MTX1Q13505 466 aa28.77■■■□□ 2.2
NELFB-201ENST00000343053 TTC12Q9H892 705 aaPredicted RBP28.77■■■□□ 2.2
NELFB-201ENST00000343053 TPCN1Q9ULQ1 816 aa28.77■■■□□ 2.2
NELFB-201ENST00000343053 AXIN2Q9Y2T1 843 aa28.77■■■□□ 2.2
NELFB-201ENST00000343053 CRYBG1Q9Y4K1 1723 aa28.77■■■□□ 2.2
NELFB-201ENST00000343053 GRM8O00222 908 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms