RNA–Protein interactions for RNA: ENST00000342784.6

SYDE1-201, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYDE1, Length 3,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-201ENST00000342784 DCTN1Q14203 1278 aa16.19■□□□□ 0.18
SYDE1-201ENST00000342784 GTF2A1P52655 376 aaPredicted RBP16.18■□□□□ 0.18
SYDE1-201ENST00000342784 ADGRB3O60242 1522 aa16.18■□□□□ 0.18
SYDE1-201ENST00000342784 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.18■□□□□ 0.18
SYDE1-201ENST00000342784 RSPH14Q9UHP6 348 aa16.18■□□□□ 0.18
SYDE1-201ENST00000342784 MRVI1Q9Y6F6 885 aa16.18■□□□□ 0.18
SYDE1-201ENST00000342784 MEIS3Q99687 375 aa16.18■□□□□ 0.18
SYDE1-201ENST00000342784 RASSF4Q9H2L5 321 aa16.18■□□□□ 0.18
SYDE1-201ENST00000342784 MYOM2P54296 1465 aa16.17■□□□□ 0.18
SYDE1-201ENST00000342784 CHMLP26374 656 aa16.17■□□□□ 0.18
SYDE1-201ENST00000342784 TPM4P67936 248 aa16.17■□□□□ 0.18
SYDE1-201ENST00000342784 GPS2Q13227 327 aa16.17■□□□□ 0.18
SYDE1-201ENST00000342784 EID1Q9Y6B2 187 aa16.17■□□□□ 0.18
SYDE1-201ENST00000342784 RIMS2Q9UQ26 1411 aa16.17■□□□□ 0.18
SYDE1-201ENST00000342784 MYCBPQ99417 103 aaPredicted RBP16.17■□□□□ 0.18
SYDE1-201ENST00000342784 EXOC6BQ9Y2D4 811 aa16.17■□□□□ 0.18
SYDE1-201ENST00000342784 TCHHQ07283 1943 aa16.17■□□□□ 0.18
SYDE1-201ENST00000342784 ZNF165P49910 485 aa16.16■□□□□ 0.18
SYDE1-201ENST00000342784 SLFNL1Q499Z3 407 aa16.16■□□□□ 0.18
SYDE1-201ENST00000342784 NEK11Q8NG66 645 aa16.16■□□□□ 0.18
SYDE1-201ENST00000342784 NECTIN2Q92692 538 aa16.16■□□□□ 0.18
SYDE1-201ENST00000342784 LIMCH1Q9UPQ0 1083 aa16.16■□□□□ 0.18
SYDE1-201ENST00000342784 SKILP12757 684 aa16.16■□□□□ 0.18
SYDE1-201ENST00000342784 KRT85P78386 507 aa16.16■□□□□ 0.18
SYDE1-201ENST00000342784 SLC4A10Q6U841 1118 aa16.16■□□□□ 0.18
SYDE1-201ENST00000342784 WAPLQ7Z5K2 1190 aa16.16■□□□□ 0.18
SYDE1-201ENST00000342784 PRAM1Q96QH2 718 aa16.16■□□□□ 0.18
SYDE1-201ENST00000342784 ARGLU1Q9NWB6 273 aaPredicted RBP16.16■□□□□ 0.18
SYDE1-201ENST00000342784 KRT24Q2M2I5 525 aa16.16■□□□□ 0.18
SYDE1-201ENST00000342784 FILIP1Q7Z7B0 1213 aa16.16■□□□□ 0.18
SYDE1-201ENST00000342784 TXLNBQ8N3L3 684 aa16.16■□□□□ 0.18
SYDE1-201ENST00000342784 ZRANB1Q9UGI0 708 aa16.16■□□□□ 0.18
SYDE1-201ENST00000342784 KIF24Q5T7B8 1368 aa16.15■□□□□ 0.18
SYDE1-201ENST00000342784 PIK3C2BO00750 1634 aa16.15■□□□□ 0.18
SYDE1-201ENST00000342784 LTKP29376 864 aa16.15■□□□□ 0.18
SYDE1-201ENST00000342784 HDGFP51858 240 aaKnown RBP16.15■□□□□ 0.18
SYDE1-201ENST00000342784 KIF1BPQ96EK5 621 aa16.15■□□□□ 0.18
SYDE1-201ENST00000342784 TAOK2Q9UL54 1235 aa16.15■□□□□ 0.18
SYDE1-201ENST00000342784 NEMFO60524 1076 aa16.15■□□□□ 0.18
SYDE1-201ENST00000342784 CCDC83Q8IWF9 413 aa16.15■□□□□ 0.18
SYDE1-201ENST00000342784 PHACTR3Q96KR7 559 aa16.15■□□□□ 0.18
SYDE1-201ENST00000342784 OSBPL3Q9H4L5 887 aa16.15■□□□□ 0.18
SYDE1-201ENST00000342784 TERF2IPQ9NYB0 399 aa16.15■□□□□ 0.18
SYDE1-201ENST00000342784 CEP83Q9Y592 693 aa16.15■□□□□ 0.18
SYDE1-201ENST00000342784 RAD50Q92878 1312 aa16.15■□□□□ 0.18
SYDE1-201ENST00000342784 KIAA1210Q9ULL0 1709 aa16.15■□□□□ 0.18
SYDE1-201ENST00000342784 GJB2P29033 226 aa16.14■□□□□ 0.18
SYDE1-201ENST00000342784 C10orf67Q8IYJ2 551 aa16.14■□□□□ 0.18
SYDE1-201ENST00000342784 USP27XA6NNY8 438 aa16.14■□□□□ 0.17
SYDE1-201ENST00000342784 AK2P54819 239 aa16.14■□□□□ 0.17
SYDE1-201ENST00000342784 ERCC6LQ2NKX8 1250 aa16.14■□□□□ 0.17
SYDE1-201ENST00000342784 DACT1Q9NYF0 836 aa16.14■□□□□ 0.17
SYDE1-201ENST00000342784 TMCO3Q6UWJ1 677 aa16.14■□□□□ 0.17
SYDE1-201ENST00000342784 KRBA2Q6ZNG9 492 aa16.14■□□□□ 0.17
SYDE1-201ENST00000342784 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.14■□□□□ 0.17
SYDE1-201ENST00000342784 LIG1P18858 919 aa16.13■□□□□ 0.17
SYDE1-201ENST00000342784 FERMT3Q86UX7 667 aa16.13■□□□□ 0.17
SYDE1-201ENST00000342784 GPATCH11Q8N954 259 aa16.13■□□□□ 0.17
SYDE1-201ENST00000342784 DNAJC25Q9H1X3 360 aa16.13■□□□□ 0.17
SYDE1-201ENST00000342784 CWC15Q9P013 229 aaKnown RBP16.13■□□□□ 0.17
SYDE1-201ENST00000342784 SH3BP1Q9Y3L3 701 aa16.13■□□□□ 0.17
SYDE1-201ENST00000342784 KIF2AO00139 706 aaPredicted RBP16.13■□□□□ 0.17
SYDE1-201ENST00000342784 SEMA3FQ13275 785 aa16.13■□□□□ 0.17
SYDE1-201ENST00000342784 CCDC144BQ3MJ40 725 aa16.13■□□□□ 0.17
SYDE1-201ENST00000342784 PLA2G4DQ86XP0 818 aa16.13■□□□□ 0.17
SYDE1-201ENST00000342784 CCDC144CPQ8IYA2 1237 aa16.13■□□□□ 0.17
SYDE1-201ENST00000342784 NCAPGQ9BPX3 1015 aa16.13■□□□□ 0.17
SYDE1-201ENST00000342784 LRRCC1Q9C099 1032 aa16.13■□□□□ 0.17
SYDE1-201ENST00000342784 A2ML1A8K2U0 1454 aa16.13■□□□□ 0.17
SYDE1-201ENST00000342784 LRRC8AQ8IWT6 810 aa16.13■□□□□ 0.17
SYDE1-201ENST00000342784 BICD2Q8TD16 824 aa16.13■□□□□ 0.17
SYDE1-201ENST00000342784 FAM135BQ49AJ0 1406 aa16.12■□□□□ 0.17
SYDE1-201ENST00000342784 MSH6P52701 1360 aa16.12■□□□□ 0.17
SYDE1-201ENST00000342784 BECN2A8MW95 431 aa16.12■□□□□ 0.17
SYDE1-201ENST00000342784 FYB1O15117 783 aa16.12■□□□□ 0.17
SYDE1-201ENST00000342784 NOP2P46087 812 aaKnown RBP16.12■□□□□ 0.17
SYDE1-201ENST00000342784 OS9Q13438 667 aaPredicted RBP16.12■□□□□ 0.17
SYDE1-201ENST00000342784 LRRFIP2Q9Y608 721 aaKnown RBP16.12■□□□□ 0.17
SYDE1-201ENST00000342784 ATP10DQ9P241 1426 aa16.12■□□□□ 0.17
SYDE1-201ENST00000342784 GORABQ5T7V8 394 aa16.12■□□□□ 0.17
SYDE1-201ENST00000342784 ZNF446Q9NWS9 450 aa16.12■□□□□ 0.17
SYDE1-201ENST00000342784 FAM53CQ9NYF3 392 aa16.12■□□□□ 0.17
SYDE1-201ENST00000342784 FER1L4A9Z1Z3 1794 aa16.12■□□□□ 0.17
SYDE1-201ENST00000342784 FAM83GA6ND36 823 aa16.11■□□□□ 0.17
SYDE1-201ENST00000342784 ARHGAP29Q52LW3 1261 aa16.11■□□□□ 0.17
SYDE1-201ENST00000342784 THEMISQ8N1K5 641 aaPredicted RBP16.11■□□□□ 0.17
SYDE1-201ENST00000342784 RBM33Q96EV2 1170 aaKnown RBP16.11■□□□□ 0.17
SYDE1-201ENST00000342784 MTMR6Q9Y217 621 aa16.11■□□□□ 0.17
SYDE1-201ENST00000342784 CCDC69A6NI79 296 aa16.11■□□□□ 0.17
SYDE1-201ENST00000342784 ARID5BQ14865 1188 aa16.11■□□□□ 0.17
SYDE1-201ENST00000342784 TDRD7Q8NHU6 1098 aaKnown RBP16.11■□□□□ 0.17
SYDE1-201ENST00000342784 TOMM22Q9NS69 142 aa16.11■□□□□ 0.17
SYDE1-201ENST00000342784 PNMA6AP0CW24 399 aaPredicted RBP16.11■□□□□ 0.17
SYDE1-201ENST00000342784 HSPA4P34932 840 aa16.11■□□□□ 0.17
SYDE1-201ENST00000342784 CLCN6P51797 869 aa16.11■□□□□ 0.17
SYDE1-201ENST00000342784 SYT10Q6XYQ8 523 aa16.11■□□□□ 0.17
SYDE1-201ENST00000342784 GOLGA6L1Q8N7Z2 621 aa16.11■□□□□ 0.17
SYDE1-201ENST00000342784 CCDC191Q8NCU4 936 aa16.11■□□□□ 0.17
SYDE1-201ENST00000342784 DDX19AQ9NUU7 478 aaKnown RBP16.11■□□□□ 0.17
SYDE1-201ENST00000342784 NEXMIFQ5QGS0 1516 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms