RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 IL17REQ8NFR9 667 aa22.92■■□□□ 1.26
TRA2B-202ENST00000342294 A1BGP04217 495 aa22.91■■□□□ 1.26
TRA2B-202ENST00000342294 AIDAQ96BJ3 306 aa22.91■■□□□ 1.26
TRA2B-202ENST00000342294 ZNF330Q9Y3S2 320 aaPredicted RBP22.91■■□□□ 1.26
TRA2B-202ENST00000342294 ST5P78524 1137 aa22.9■■□□□ 1.26
TRA2B-202ENST00000342294 DIAPH1O60610 1272 aaKnown RBP22.89■■□□□ 1.25
TRA2B-202ENST00000342294 SLC34A2O95436 690 aa22.89■■□□□ 1.25
TRA2B-202ENST00000342294 SCN4AP35499 1836 aa22.89■■□□□ 1.25
TRA2B-202ENST00000342294 LBX1P52954 281 aa22.88■■□□□ 1.25
TRA2B-202ENST00000342294 TEFQ10587 303 aa22.88■■□□□ 1.25
TRA2B-202ENST00000342294 CCDC93Q567U6 631 aa22.88■■□□□ 1.25
TRA2B-202ENST00000342294 ZNF541Q9H0D2 1346 aa22.87■■□□□ 1.25
TRA2B-202ENST00000342294 KLRG2A4D1S0 409 aaPredicted RBP22.87■■□□□ 1.25
TRA2B-202ENST00000342294 RASSF10A6NK89 507 aa22.87■■□□□ 1.25
TRA2B-202ENST00000342294 FMNL2Q96PY5 1086 aa22.87■■□□□ 1.25
TRA2B-202ENST00000342294 ARFGEF2Q9Y6D5 1785 aa22.86■■□□□ 1.25
TRA2B-202ENST00000342294 NPHP1O15259 732 aa22.86■■□□□ 1.25
TRA2B-202ENST00000342294 FKBP4Q02790 459 aaKnown RBP eCLIP22.86■■□□□ 1.25
TRA2B-202ENST00000342294 HACL1Q9UJ83 578 aa22.86■■□□□ 1.25
TRA2B-202ENST00000342294 CLSPNQ9HAW4 1339 aa22.85■■□□□ 1.25
TRA2B-202ENST00000342294 GNAT3A8MTJ3 354 aa22.85■■□□□ 1.25
TRA2B-202ENST00000342294 HSPA8P11142 646 aaKnown RBP22.85■■□□□ 1.25
TRA2B-202ENST00000342294 NPR1P16066 1061 aa22.85■■□□□ 1.25
TRA2B-202ENST00000342294 EAPPQ56P03 285 aaPredicted RBP22.85■■□□□ 1.25
TRA2B-202ENST00000342294 DZIP3Q86Y13 1208 aaKnown RBP22.85■■□□□ 1.25
TRA2B-202ENST00000342294 ADAMTSL1Q8N6G6 1762 aa22.85■■□□□ 1.25
TRA2B-202ENST00000342294 EPHX2P34913 555 aa22.84■■□□□ 1.25
TRA2B-202ENST00000342294 CLEC4GQ6UXB4 293 aa22.84■■□□□ 1.25
TRA2B-202ENST00000342294 NPM2Q86SE8 214 aaKnown RBP22.84■■□□□ 1.25
TRA2B-202ENST00000342294 ZNF277Q9NRM2 450 aaPredicted RBP22.84■■□□□ 1.25
TRA2B-202ENST00000342294 DEFB115Q30KQ5 88 aa22.83■■□□□ 1.25
TRA2B-202ENST00000342294 NBPF5PQ86XG9 351 aaPredicted RBP22.83■■□□□ 1.25
TRA2B-202ENST00000342294 CNTROBQ8N137 903 aa22.83■■□□□ 1.25
TRA2B-202ENST00000342294 ABHD8Q96I13 439 aa22.83■■□□□ 1.25
TRA2B-202ENST00000342294 CEMIPQ8WUJ3 1361 aa22.83■■□□□ 1.25
TRA2B-202ENST00000342294 FZD9O00144 591 aa22.82■■□□□ 1.24
TRA2B-202ENST00000342294 KCNQ3O43525 872 aa22.82■■□□□ 1.24
TRA2B-202ENST00000342294 TRIM26Q12899 539 aaPredicted RBP22.82■■□□□ 1.24
TRA2B-202ENST00000342294 OLFM4Q6UX06 510 aa22.82■■□□□ 1.24
TRA2B-202ENST00000342294 PNMA8AQ86V59 439 aaPredicted RBP22.82■■□□□ 1.24
TRA2B-202ENST00000342294 GAS2L2Q8NHY3 880 aa22.82■■□□□ 1.24
TRA2B-202ENST00000342294 CLEC11AQ9Y240 323 aa22.82■■□□□ 1.24
TRA2B-202ENST00000342294 SIPA1L3O60292 1781 aaPredicted RBP22.81■■□□□ 1.24
TRA2B-202ENST00000342294 MAP1SQ66K74 1059 aaPredicted RBP22.81■■□□□ 1.24
TRA2B-202ENST00000342294 USP16Q9Y5T5 823 aa22.81■■□□□ 1.24
TRA2B-202ENST00000342294 CACNA1SQ13698 1873 aa22.81■■□□□ 1.24
TRA2B-202ENST00000342294 BCORQ6W2J9 1755 aa22.81■■□□□ 1.24
TRA2B-202ENST00000342294 PER1O15534 1290 aaPredicted RBP22.8■■□□□ 1.24
TRA2B-202ENST00000342294 RTKN2Q8IZC4 609 aa22.8■■□□□ 1.24
TRA2B-202ENST00000342294 RNF123Q5XPI4 1314 aa22.8■■□□□ 1.24
TRA2B-202ENST00000342294 WDR33Q9C0J8 1336 aaKnown RBP22.8■■□□□ 1.24
TRA2B-202ENST00000342294 PIP4K2AP48426 406 aaPredicted RBP22.79■■□□□ 1.24
TRA2B-202ENST00000342294 MAP2K1Q02750 393 aaPredicted RBP22.79■■□□□ 1.24
TRA2B-202ENST00000342294 COL3A1P02461 1466 aaPredicted RBP22.79■■□□□ 1.24
TRA2B-202ENST00000342294 RGL2O15211 777 aa22.78■■□□□ 1.24
TRA2B-202ENST00000342294 IARSP41252 1262 aaKnown RBP22.78■■□□□ 1.24
TRA2B-202ENST00000342294 GPC2Q8N158 579 aa22.78■■□□□ 1.24
TRA2B-202ENST00000342294 SNED1Q8TER0 1413 aa22.77■■□□□ 1.24
TRA2B-202ENST00000342294 BTBD11A6QL63 1104 aa22.77■■□□□ 1.24
TRA2B-202ENST00000342294 FAM161AQ3B820 660 aa22.77■■□□□ 1.24
TRA2B-202ENST00000342294 TPTE2Q6XPS3 522 aa22.77■■□□□ 1.24
TRA2B-202ENST00000342294 SYNE4Q8N205 404 aa22.77■■□□□ 1.24
TRA2B-202ENST00000342294 ZNF652Q9Y2D9 606 aa22.77■■□□□ 1.24
TRA2B-202ENST00000342294 PRAMEF22A3QJZ6 481 aa22.76■■□□□ 1.23
TRA2B-202ENST00000342294 U2SURPO15042 1029 aaKnown RBP22.75■■□□□ 1.23
TRA2B-202ENST00000342294 DDX21Q9NR30 783 aaKnown RBP eCLIP22.75■■□□□ 1.23
TRA2B-202ENST00000342294 CC2D1BQ5T0F9 858 aaKnown RBP22.74■■□□□ 1.23
TRA2B-202ENST00000342294 PSMD1Q99460 953 aa22.74■■□□□ 1.23
TRA2B-202ENST00000342294 ABT1Q9ULW3 272 aaKnown RBP22.74■■□□□ 1.23
TRA2B-202ENST00000342294 NIP7Q9Y221 180 aaKnown RBP eCLIP22.74■■□□□ 1.23
TRA2B-202ENST00000342294 NBPF26B4DH59 902 aa22.73■■□□□ 1.23
TRA2B-202ENST00000342294 ALDH1B1P30837 517 aa22.73■■□□□ 1.23
TRA2B-202ENST00000342294 NBPF10Q6P3W6 841 aaKnown RBP22.73■■□□□ 1.23
TRA2B-202ENST00000342294 NBPF15Q8N660 670 aa22.73■■□□□ 1.23
TRA2B-202ENST00000342294 PHACTR3Q96KR7 559 aa22.73■■□□□ 1.23
TRA2B-202ENST00000342294 KIF7Q2M1P5 1343 aa22.73■■□□□ 1.23
TRA2B-202ENST00000342294 SNRPA1P09661 255 aaKnown RBP22.72■■□□□ 1.23
TRA2B-202ENST00000342294 RGS19P49795 217 aa22.72■■□□□ 1.23
TRA2B-202ENST00000342294 FMR1Q06787 632 aaKnown RBP eCLIP22.7■■□□□ 1.22
TRA2B-202ENST00000342294 CRY2Q49AN0 593 aa22.7■■□□□ 1.22
TRA2B-202ENST00000342294 JDP2Q8WYK2 163 aa22.7■■□□□ 1.22
TRA2B-202ENST00000342294 CAPNS2Q96L46 248 aa22.7■■□□□ 1.22
TRA2B-202ENST00000342294 THSD7BQ9C0I4 1608 aa22.7■■□□□ 1.22
TRA2B-202ENST00000342294 COL4A5P29400 1685 aa22.7■■□□□ 1.22
TRA2B-202ENST00000342294 FAM177BA6PVY3 158 aa22.69■■□□□ 1.22
TRA2B-202ENST00000342294 SCNN1DP51172 638 aa22.68■■□□□ 1.22
TRA2B-202ENST00000342294 HLFQ16534 295 aa22.68■■□□□ 1.22
TRA2B-202ENST00000342294 CST9Q5W186 159 aa22.68■■□□□ 1.22
TRA2B-202ENST00000342294 CC2D2BQ6DHV5 1058 aa22.68■■□□□ 1.22
TRA2B-202ENST00000342294 LTBP1Q14766 1721 aa22.68■■□□□ 1.22
TRA2B-202ENST00000342294 NPC1L1Q9UHC9 1359 aa22.67■■□□□ 1.22
TRA2B-202ENST00000342294 PRKAR2BP31323 418 aa22.67■■□□□ 1.22
TRA2B-202ENST00000342294 EPS15P42566 896 aa22.67■■□□□ 1.22
TRA2B-202ENST00000342294 ECE1P42892 770 aa22.67■■□□□ 1.22
TRA2B-202ENST00000342294 EIF6P56537 245 aaKnown RBP22.67■■□□□ 1.22
TRA2B-202ENST00000342294 MLLT1Q03111 559 aaPredicted RBP22.67■■□□□ 1.22
TRA2B-202ENST00000342294 GPR101Q96P66 508 aaPredicted RBP22.67■■□□□ 1.22
TRA2B-202ENST00000342294 RSPH6AQ9H0K4 717 aa22.67■■□□□ 1.22
TRA2B-202ENST00000342294 GJA3Q9Y6H8 435 aa22.67■■□□□ 1.22
TRA2B-202ENST00000342294 CYP4F22Q6NT55 531 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms