RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 GSPT1P15170 499 aaKnown RBP13.85□□□□□ -0.19
TRAK1-202ENST00000341421 ZNF592Q92610 1267 aa13.85□□□□□ -0.19
TRAK1-202ENST00000341421 UBE2HP62256 183 aa13.85□□□□□ -0.19
TRAK1-202ENST00000341421 CCDC158Q5M9N0 1113 aa13.85□□□□□ -0.19
TRAK1-202ENST00000341421 HOOK1Q9UJC3 728 aaKnown RBP13.84□□□□□ -0.19
TRAK1-202ENST00000341421 ALKQ9UM73 1620 aa13.84□□□□□ -0.19
TRAK1-202ENST00000341421 APPP05067 770 aa13.84□□□□□ -0.19
TRAK1-202ENST00000341421 MAP3K11Q16584 847 aa13.84□□□□□ -0.19
TRAK1-202ENST00000341421 KSR2Q6VAB6 950 aa13.84□□□□□ -0.19
TRAK1-202ENST00000341421 HMG20BQ9P0W2 317 aa13.84□□□□□ -0.19
TRAK1-202ENST00000341421 IP6K1Q92551 441 aa13.84□□□□□ -0.19
TRAK1-202ENST00000341421 SDF4Q9BRK5 362 aa13.84□□□□□ -0.19
TRAK1-202ENST00000341421 USP25Q9UHP3 1055 aa13.84□□□□□ -0.19
TRAK1-202ENST00000341421 NEXMIFQ5QGS0 1516 aa13.84□□□□□ -0.19
TRAK1-202ENST00000341421 ADGRB1O14514 1584 aa13.83□□□□□ -0.19
TRAK1-202ENST00000341421 BOLA2Q9H3K6 86 aa13.83□□□□□ -0.19
TRAK1-202ENST00000341421 ZSCAN22P10073 491 aaPredicted RBP13.83□□□□□ -0.2
TRAK1-202ENST00000341421 ZGPATQ8N5A5 531 aaKnown RBP13.83□□□□□ -0.2
TRAK1-202ENST00000341421 CTNNA3Q9UI47 895 aa13.83□□□□□ -0.2
TRAK1-202ENST00000341421 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.83□□□□□ -0.2
TRAK1-202ENST00000341421 HMGB1P09429 215 aaKnown RBP13.83□□□□□ -0.2
TRAK1-202ENST00000341421 STK3Q13188 491 aa13.83□□□□□ -0.2
TRAK1-202ENST00000341421 ZC3H6P61129 1189 aaKnown RBP13.83□□□□□ -0.2
TRAK1-202ENST00000341421 U3KPZ7 1027 aaPredicted RBP13.83□□□□□ -0.2
TRAK1-202ENST00000341421 AKAP17AQ02040 695 aaKnown RBP13.82□□□□□ -0.2
TRAK1-202ENST00000341421 LINS1Q8NG48 757 aa13.82□□□□□ -0.2
TRAK1-202ENST00000341421 ANKRD24Q8TF21 1146 aa13.82□□□□□ -0.2
TRAK1-202ENST00000341421 SSH2Q76I76 1423 aa13.82□□□□□ -0.2
TRAK1-202ENST00000341421 DHX8Q14562 1220 aaKnown RBP13.82□□□□□ -0.2
TRAK1-202ENST00000341421 MYD88Q99836 296 aa13.82□□□□□ -0.2
TRAK1-202ENST00000341421 A2ML1A8K2U0 1454 aa13.82□□□□□ -0.2
TRAK1-202ENST00000341421 CCDC112Q8NEF3 446 aa13.82□□□□□ -0.2
TRAK1-202ENST00000341421 CCDC8Q9H0W5 538 aaPredicted RBP13.82□□□□□ -0.2
TRAK1-202ENST00000341421 KIF6Q6ZMV9 814 aa13.81□□□□□ -0.2
TRAK1-202ENST00000341421 SPC24Q8NBT2 197 aa13.81□□□□□ -0.2
TRAK1-202ENST00000341421 CEP126Q9P2H0 1117 aa13.81□□□□□ -0.2
TRAK1-202ENST00000341421 PLEKHG1Q9ULL1 1385 aa13.81□□□□□ -0.2
TRAK1-202ENST00000341421 GJB2P29033 226 aa13.81□□□□□ -0.2
TRAK1-202ENST00000341421 OSBPL3Q9H4L5 887 aa13.81□□□□□ -0.2
TRAK1-202ENST00000341421 GRM8O00222 908 aa13.81□□□□□ -0.2
TRAK1-202ENST00000341421 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.81□□□□□ -0.28e-7■■■■■ 31.6
TRAK1-202ENST00000341421 LMBRD1Q9NUN5 540 aa13.81□□□□□ -0.2
TRAK1-202ENST00000341421 TBC1D2BQ9UPU7 963 aa13.81□□□□□ -0.2
TRAK1-202ENST00000341421 SAFBQ15424 915 aaKnown RBP eCLIP13.81□□□□□ -0.2
TRAK1-202ENST00000341421 TEX35Q5T0J7 233 aa13.81□□□□□ -0.2
TRAK1-202ENST00000341421 FMNL2Q96PY5 1086 aa13.81□□□□□ -0.2
TRAK1-202ENST00000341421 ADCY5O95622 1261 aa13.8□□□□□ -0.2
TRAK1-202ENST00000341421 TTC39AQ5SRH9 613 aa13.8□□□□□ -0.2
TRAK1-202ENST00000341421 NFXL1Q6ZNB6 911 aa13.8□□□□□ -0.2
TRAK1-202ENST00000341421 BCL11BQ9C0K0 894 aaPredicted RBP13.8□□□□□ -0.2
TRAK1-202ENST00000341421 USP6P35125 1406 aa13.8□□□□□ -0.2
TRAK1-202ENST00000341421 CCDC57Q2TAC2 916 aa13.8□□□□□ -0.2
TRAK1-202ENST00000341421 PTPRMP28827 1452 aa13.8□□□□□ -0.2
TRAK1-202ENST00000341421 LRRC7Q96NW7 1537 aa13.8□□□□□ -0.2
TRAK1-202ENST00000341421 FOSBP53539 338 aa13.8□□□□□ -0.2
TRAK1-202ENST00000341421 IFNL2Q8IZJ0 200 aa13.8□□□□□ -0.2
TRAK1-202ENST00000341421 KCNA6P17658 529 aa13.79□□□□□ -0.2
TRAK1-202ENST00000341421 DIP2CQ9Y2E4 1556 aa13.79□□□□□ -0.2
TRAK1-202ENST00000341421 ZC3H13Q5T200 1668 aaKnown RBP13.79□□□□□ -0.2
TRAK1-202ENST00000341421 TPD52L1Q16890 204 aaPredicted RBP13.79□□□□□ -0.2
TRAK1-202ENST00000341421 ZSCAN25Q6NSZ9 544 aa13.79□□□□□ -0.2
TRAK1-202ENST00000341421 SIRT2Q8IXJ6 389 aa13.79□□□□□ -0.2
TRAK1-202ENST00000341421 GDPD2Q9HCC8 539 aa13.79□□□□□ -0.2
TRAK1-202ENST00000341421 DDX19AQ9NUU7 478 aaKnown RBP13.79□□□□□ -0.2
TRAK1-202ENST00000341421 RAD50Q92878 1312 aa13.79□□□□□ -0.2
TRAK1-202ENST00000341421 MYO3AQ8NEV4 1616 aa13.79□□□□□ -0.2
TRAK1-202ENST00000341421 ERICH2A1L162 156 aa13.79□□□□□ -0.2
TRAK1-202ENST00000341421 ANXA1P04083 346 aa13.79□□□□□ -0.2
TRAK1-202ENST00000341421 STK38Q15208 465 aa13.79□□□□□ -0.2
TRAK1-202ENST00000341421 KRT28Q7Z3Y7 464 aa13.79□□□□□ -0.2
TRAK1-202ENST00000341421 ZNF830Q96NB3 372 aaPredicted RBP13.79□□□□□ -0.2
TRAK1-202ENST00000341421 FEZ1Q99689 392 aa13.79□□□□□ -0.2
TRAK1-202ENST00000341421 ARHGEF40Q8TER5 1519 aa13.79□□□□□ -0.2
TRAK1-202ENST00000341421 USP32Q8NFA0 1604 aa13.79□□□□□ -0.2
TRAK1-202ENST00000341421 PIBF1Q8WXW3 757 aa13.79□□□□□ -0.2
TRAK1-202ENST00000341421 DLC1Q96QB1 1528 aa13.79□□□□□ -0.2
TRAK1-202ENST00000341421 PHAXQ9H814 394 aaKnown RBP13.78□□□□□ -0.2
TRAK1-202ENST00000341421 FERMT3Q86UX7 667 aa13.78□□□□□ -0.2
TRAK1-202ENST00000341421 JMYQ8N9B5 988 aa13.78□□□□□ -0.2
TRAK1-202ENST00000341421 PRDM4Q9UKN5 801 aa13.78□□□□□ -0.2
TRAK1-202ENST00000341421 PNMA6EA0A0J9YXQ4 647 aa13.78□□□□□ -0.2
TRAK1-202ENST00000341421 SNRPA1P09661 255 aaKnown RBP13.78□□□□□ -0.2
TRAK1-202ENST00000341421 TOM1L2Q6ZVM7 507 aa13.78□□□□□ -0.2
TRAK1-202ENST00000341421 CCAR2Q8N163 923 aaKnown RBP13.78□□□□□ -0.2
TRAK1-202ENST00000341421 IGSF1Q8N6C5 1336 aa13.78□□□□□ -0.2
TRAK1-202ENST00000341421 VPS53Q5VIR6 699 aa13.78□□□□□ -0.2
TRAK1-202ENST00000341421 USP48Q86UV5 1035 aa13.78□□□□□ -0.2
TRAK1-202ENST00000341421 TTC12Q9H892 705 aaPredicted RBP13.78□□□□□ -0.2
TRAK1-202ENST00000341421 CALCOCO1Q9P1Z2 691 aa13.78□□□□□ -0.2
TRAK1-202ENST00000341421 PRR36Q9H6K5 1346 aa13.77□□□□□ -0.21
TRAK1-202ENST00000341421 F13A1P00488 732 aa13.77□□□□□ -0.21
TRAK1-202ENST00000341421 ME1P48163 572 aa13.77□□□□□ -0.21
TRAK1-202ENST00000341421 SSH3Q8TE77 659 aa13.77□□□□□ -0.21
TRAK1-202ENST00000341421 AKAP2Q9Y2D5 859 aa13.77□□□□□ -0.21
TRAK1-202ENST00000341421 RBM8AQ9Y5S9 174 aaKnown RBP13.77□□□□□ -0.21
TRAK1-202ENST00000341421 ROBO2Q9HCK4 1378 aa13.77□□□□□ -0.21
TRAK1-202ENST00000341421 A0A087WZG4 1122 aa13.77□□□□□ -0.21
TRAK1-202ENST00000341421 FBXW7Q969H0 707 aa13.77□□□□□ -0.21
TRAK1-202ENST00000341421 PRDM11Q9NQV5 511 aa13.77□□□□□ -0.21
TRAK1-202ENST00000341421 SGSM2O43147 1006 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms