RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 PNISRQ8TF01 805 aaKnown RBP17.32■□□□□ 0.36
NECTIN1-203ENST00000341398 ZNF219Q9P2Y4 722 aaPredicted RBP17.32■□□□□ 0.36
NECTIN1-203ENST00000341398 RGL2O15211 777 aa17.31■□□□□ 0.36
NECTIN1-203ENST00000341398 DCTN1Q14203 1278 aa17.31■□□□□ 0.36
NECTIN1-203ENST00000341398 TPTE2Q6XPS3 522 aa17.31■□□□□ 0.36
NECTIN1-203ENST00000341398 DNAJC5GQ8N7S2 189 aa17.31■□□□□ 0.36
NECTIN1-203ENST00000341398 MASTLQ96GX5 879 aa17.31■□□□□ 0.36
NECTIN1-203ENST00000341398 DICER1Q9UPY3 1922 aaKnown RBP17.31■□□□□ 0.36
NECTIN1-203ENST00000341398 BCORQ6W2J9 1755 aa17.3■□□□□ 0.36
NECTIN1-203ENST00000341398 NFKBIEO00221 500 aa17.3■□□□□ 0.36
NECTIN1-203ENST00000341398 WDR90Q96KV7 1748 aa17.3■□□□□ 0.36
NECTIN1-203ENST00000341398 PRAMEF22A3QJZ6 481 aa17.29■□□□□ 0.36
NECTIN1-203ENST00000341398 SRGNP10124 158 aa17.29■□□□□ 0.36
NECTIN1-203ENST00000341398 PIP4K2AP48426 406 aaPredicted RBP17.29■□□□□ 0.36
NECTIN1-203ENST00000341398 ERFEQ4G0M1 354 aa17.29■□□□□ 0.36
NECTIN1-203ENST00000341398 FER1L6Q2WGJ9 1857 aa17.29■□□□□ 0.36
NECTIN1-203ENST00000341398 TAOK3Q9H2K8 898 aa17.28■□□□□ 0.36
NECTIN1-203ENST00000341398 NIP7Q9Y221 180 aaKnown RBP eCLIP17.28■□□□□ 0.36
NECTIN1-203ENST00000341398 CACNA1SQ13698 1873 aa17.28■□□□□ 0.36
NECTIN1-203ENST00000341398 TIAM2Q8IVF5 1701 aa17.28■□□□□ 0.36
NECTIN1-203ENST00000341398 GTF2E1P29083 439 aaPredicted RBP17.28■□□□□ 0.36
NECTIN1-203ENST00000341398 PRELPP51888 382 aa17.28■□□□□ 0.36
NECTIN1-203ENST00000341398 LTBP3Q9NS15 1303 aa17.27■□□□□ 0.36
NECTIN1-203ENST00000341398 SLX4Q8IY92 1834 aa17.27■□□□□ 0.36
NECTIN1-203ENST00000341398 DLG5Q8TDM6 1919 aa17.27■□□□□ 0.36
NECTIN1-203ENST00000341398 NPR1P16066 1061 aa17.27■□□□□ 0.35
NECTIN1-203ENST00000341398 PRPF40BQ6NWY9 871 aaKnown RBP17.27■□□□□ 0.35
NECTIN1-203ENST00000341398 KLRG1Q96E93 195 aa17.27■□□□□ 0.35
NECTIN1-203ENST00000341398 MIS18AQ9NYP9 233 aa17.27■□□□□ 0.35
NECTIN1-203ENST00000341398 COL11A2P13942 1736 aaPredicted RBP17.26■□□□□ 0.35
NECTIN1-203ENST00000341398 MAPK8IP3Q9UPT6 1336 aa17.26■□□□□ 0.35
NECTIN1-203ENST00000341398 NBPF26B4DH59 902 aa17.26■□□□□ 0.35
NECTIN1-203ENST00000341398 CAPN15O75808 1086 aa17.26■□□□□ 0.35
NECTIN1-203ENST00000341398 NBPF10Q6P3W6 841 aaKnown RBP17.26■□□□□ 0.35
NECTIN1-203ENST00000341398 NBPF15Q8N660 670 aa17.26■□□□□ 0.35
NECTIN1-203ENST00000341398 PCNTO95613 3336 aa17.25■□□□□ 0.35
NECTIN1-203ENST00000341398 ALDH1B1P30837 517 aa17.25■□□□□ 0.35
NECTIN1-203ENST00000341398 NFE2L2Q16236 605 aa17.25■□□□□ 0.35
NECTIN1-203ENST00000341398 COL13A1Q5TAT6 717 aaPredicted RBP17.25■□□□□ 0.35
NECTIN1-203ENST00000341398 ARFGEF2Q9Y6D5 1785 aa17.24■□□□□ 0.35
NECTIN1-203ENST00000341398 CCDC93Q567U6 631 aa17.24■□□□□ 0.35
NECTIN1-203ENST00000341398 NYXQ9GZU5 481 aa17.24■□□□□ 0.35
NECTIN1-203ENST00000341398 KLRG2A4D1S0 409 aaPredicted RBP17.23■□□□□ 0.35
NECTIN1-203ENST00000341398 FAM177BA6PVY3 158 aa17.23■□□□□ 0.35
NECTIN1-203ENST00000341398 ERVV-1B6SEH8 477 aa17.23■□□□□ 0.35
NECTIN1-203ENST00000341398 KIF6Q6ZMV9 814 aa17.23■□□□□ 0.35
NECTIN1-203ENST00000341398 NGEFQ8N5V2 710 aa17.23■□□□□ 0.35
NECTIN1-203ENST00000341398 HTRA3P83110 453 aa17.22■□□□□ 0.35
NECTIN1-203ENST00000341398 RTKN2Q8IZC4 609 aa17.22■□□□□ 0.35
NECTIN1-203ENST00000341398 PLEKHF1Q96S99 279 aa17.22■□□□□ 0.35
NECTIN1-203ENST00000341398 RRP7AQ9Y3A4 280 aaKnown RBP17.22■□□□□ 0.35
NECTIN1-203ENST00000341398 LAMB4A4D0S4 1761 aa17.22■□□□□ 0.35
NECTIN1-203ENST00000341398 EIF4A1P60842 406 aaKnown RBP17.21■□□□□ 0.35
NECTIN1-203ENST00000341398 HLFQ16534 295 aa17.21■□□□□ 0.35
NECTIN1-203ENST00000341398 NUP98P52948 1817 aa17.21■□□□□ 0.34
NECTIN1-203ENST00000341398 POTECB2RU33 542 aa17.2■□□□□ 0.34
NECTIN1-203ENST00000341398 JMYQ8N9B5 988 aa17.2■□□□□ 0.34
NECTIN1-203ENST00000341398 C7orf43Q8WVR3 580 aa17.2■□□□□ 0.34
NECTIN1-203ENST00000341398 MAP3K15Q6ZN16 1313 aa17.19■□□□□ 0.34
NECTIN1-203ENST00000341398 IQCA1LA6NCM1 817 aa17.19■□□□□ 0.34
NECTIN1-203ENST00000341398 FKBP4Q02790 459 aaKnown RBP eCLIP17.19■□□□□ 0.34
NECTIN1-203ENST00000341398 RALBP1Q15311 655 aa17.19■□□□□ 0.34
NECTIN1-203ENST00000341398 KDM3BQ7LBC6 1761 aa17.19■□□□□ 0.34
NECTIN1-203ENST00000341398 DDNO94850 711 aaPredicted RBP17.18■□□□□ 0.34
NECTIN1-203ENST00000341398 MYL6BP14649 208 aa17.18■□□□□ 0.34
NECTIN1-203ENST00000341398 CHADLQ6NUI6 762 aa17.17■□□□□ 0.34
NECTIN1-203ENST00000341398 TSPYL4Q9UJ04 414 aa17.17■□□□□ 0.34
NECTIN1-203ENST00000341398 ERBB4Q15303 1308 aa17.17■□□□□ 0.34
NECTIN1-203ENST00000341398 RIPK4P57078 832 aa17.16■□□□□ 0.34
NECTIN1-203ENST00000341398 LMOD3Q0VAK6 560 aa17.16■□□□□ 0.34
NECTIN1-203ENST00000341398 CC2D2BQ6DHV5 1058 aa17.16■□□□□ 0.34
NECTIN1-203ENST00000341398 RPGRQ92834 1020 aaKnown RBP17.16■□□□□ 0.34
NECTIN1-203ENST00000341398 THUMPD2Q9BTF0 503 aaKnown RBP17.16■□□□□ 0.34
NECTIN1-203ENST00000341398 BABAM1Q9NWV8 329 aa17.16■□□□□ 0.34
NECTIN1-203ENST00000341398 SCN4AP35499 1836 aa17.16■□□□□ 0.34
NECTIN1-203ENST00000341398 GRIPAP1Q4V328 841 aa17.15■□□□□ 0.34
NECTIN1-203ENST00000341398 TTLL7Q6ZT98 887 aa17.15■□□□□ 0.34
NECTIN1-203ENST00000341398 PPP1R42Q7Z4L9 355 aa17.15■□□□□ 0.34
NECTIN1-203ENST00000341398 NUTM1Q86Y26 1132 aa17.15■□□□□ 0.34
NECTIN1-203ENST00000341398 TNS4Q8IZW8 715 aa17.15■□□□□ 0.34
NECTIN1-203ENST00000341398 SYNE4Q8N205 404 aa17.15■□□□□ 0.34
NECTIN1-203ENST00000341398 JDP2Q8WYK2 163 aa17.15■□□□□ 0.34
NECTIN1-203ENST00000341398 TMX4Q9H1E5 349 aaPredicted RBP17.15■□□□□ 0.34
NECTIN1-203ENST00000341398 ZBTB3Q9H5J0 574 aa17.15■□□□□ 0.34
NECTIN1-203ENST00000341398 ZNF277Q9NRM2 450 aaPredicted RBP17.15■□□□□ 0.34
NECTIN1-203ENST00000341398 GPTP24298 496 aa17.14■□□□□ 0.33
NECTIN1-203ENST00000341398 IARSP41252 1262 aaKnown RBP17.14■□□□□ 0.33
NECTIN1-203ENST00000341398 CRY2Q49AN0 593 aa17.14■□□□□ 0.33
NECTIN1-203ENST00000341398 GIGYF2Q6Y7W6 1299 aaKnown RBP17.14■□□□□ 0.33
NECTIN1-203ENST00000341398 RBM17Q96I25 401 aaKnown RBP17.14■□□□□ 0.33
NECTIN1-203ENST00000341398 L3MBTL3Q96JM7 780 aaPredicted RBP17.14■□□□□ 0.33
NECTIN1-203ENST00000341398 IBTKQ9P2D0 1353 aaPredicted RBP17.13■□□□□ 0.33
NECTIN1-203ENST00000341398 EIF2S2P20042 333 aaKnown RBP17.13■□□□□ 0.33
NECTIN1-203ENST00000341398 PARP10Q53GL7 1025 aa17.13■□□□□ 0.33
NECTIN1-203ENST00000341398 LDHDQ86WU2 507 aa17.13■□□□□ 0.33
NECTIN1-203ENST00000341398 PSMD1Q99460 953 aa17.13■□□□□ 0.33
NECTIN1-203ENST00000341398 ZNF34Q8IZ26 560 aa17.12■□□□□ 0.33
NECTIN1-203ENST00000341398 CREBZFQ9NS37 354 aa17.12■□□□□ 0.33
NECTIN1-203ENST00000341398 HACL1Q9UJ83 578 aa17.12■□□□□ 0.33
NECTIN1-203ENST00000341398 HOXA10P31260 410 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms