RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 NHSL1Q5SYE7 1610 aa14.25□□□□□ -0.13
RTN3-203ENST00000341307 EP400NLQ6ZTU2 488 aa14.25□□□□□ -0.13
RTN3-203ENST00000341307 FAM53CQ9NYF3 392 aa14.25□□□□□ -0.13
RTN3-203ENST00000341307 DDX19BQ9UMR2 479 aa14.25□□□□□ -0.13
RTN3-203ENST00000341307 AHDC1Q5TGY3 1603 aaPredicted RBP14.25□□□□□ -0.13
RTN3-203ENST00000341307 HAP1P54257 671 aaPredicted RBP14.24□□□□□ -0.13
RTN3-203ENST00000341307 CHAF1AQ13111 956 aaPredicted RBP14.24□□□□□ -0.13
RTN3-203ENST00000341307 LTN1O94822 1766 aa14.24□□□□□ -0.13
RTN3-203ENST00000341307 CHL1O00533 1208 aa14.23□□□□□ -0.13
RTN3-203ENST00000341307 DHX16O60231 1041 aaKnown RBP14.23□□□□□ -0.13
RTN3-203ENST00000341307 FAM193AP78312 1265 aa14.23□□□□□ -0.13
RTN3-203ENST00000341307 NAA30Q147X3 362 aaPredicted RBP14.23□□□□□ -0.13
RTN3-203ENST00000341307 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.23□□□□□ -0.13
RTN3-203ENST00000341307 KIAA1524Q8TCG1 905 aa14.23□□□□□ -0.13
RTN3-203ENST00000341307 CRB1P82279 1406 aa14.23□□□□□ -0.13
RTN3-203ENST00000341307 CYP2C19P33261 490 aa14.22□□□□□ -0.13
RTN3-203ENST00000341307 TNNT3P45378 269 aaPredicted RBP14.22□□□□□ -0.13
RTN3-203ENST00000341307 NUCB2P80303 420 aa14.22□□□□□ -0.13
RTN3-203ENST00000341307 RTF1Q92541 710 aaKnown RBP14.22□□□□□ -0.13
RTN3-203ENST00000341307 ZNF428Q96B54 188 aa14.22□□□□□ -0.13
RTN3-203ENST00000341307 TSPY26PQ9H489 355 aa14.22□□□□□ -0.13
RTN3-203ENST00000341307 CHAMP1Q96JM3 812 aa14.22□□□□□ -0.13
RTN3-203ENST00000341307 TMX1Q9H3N1 280 aa14.22□□□□□ -0.13
RTN3-203ENST00000341307 C1orf115Q9H7X2 142 aa14.22□□□□□ -0.13
RTN3-203ENST00000341307 ST7Q9NRC1 585 aa14.22□□□□□ -0.13
RTN3-203ENST00000341307 ZBTB40Q9NUA8 1239 aa14.22□□□□□ -0.13
RTN3-203ENST00000341307 USP54Q70EL1 1684 aa14.22□□□□□ -0.13
RTN3-203ENST00000341307 NFATC2IPQ8NCF5 419 aa14.21□□□□□ -0.13
RTN3-203ENST00000341307 JCADQ9P266 1359 aa14.21□□□□□ -0.13
RTN3-203ENST00000341307 NFAT5O94916 1531 aa14.21□□□□□ -0.13
RTN3-203ENST00000341307 GTF2A1P52655 376 aaPredicted RBP14.21□□□□□ -0.13
RTN3-203ENST00000341307 BRPF1P55201 1214 aaPredicted RBP14.21□□□□□ -0.13
RTN3-203ENST00000341307 NBPF6Q5VWK0 638 aa14.21□□□□□ -0.13
RTN3-203ENST00000341307 NBPF4Q96M43 638 aa14.21□□□□□ -0.13
RTN3-203ENST00000341307 PYCARDQ9ULZ3 195 aa14.21□□□□□ -0.13
RTN3-203ENST00000341307 USP25Q9UHP3 1055 aa14.2□□□□□ -0.14
RTN3-203ENST00000341307 CT47A1Q5JQC4 288 aaPredicted RBP14.2□□□□□ -0.14
RTN3-203ENST00000341307 IP6K1Q92551 441 aa14.2□□□□□ -0.14
RTN3-203ENST00000341307 KCNF1Q9H3M0 494 aa14.2□□□□□ -0.14
RTN3-203ENST00000341307 TSPYL4Q9UJ04 414 aa14.2□□□□□ -0.14
RTN3-203ENST00000341307 KIF1AQ12756 1690 aa14.2□□□□□ -0.14
RTN3-203ENST00000341307 LRP6O75581 1613 aa14.2□□□□□ -0.14
RTN3-203ENST00000341307 TNS3Q68CZ2 1445 aa14.2□□□□□ -0.14
RTN3-203ENST00000341307 GCP02774 474 aa14.19□□□□□ -0.14
RTN3-203ENST00000341307 ZC3H6P61129 1189 aaKnown RBP14.19□□□□□ -0.14
RTN3-203ENST00000341307 CREBRFQ8IUR6 639 aa14.19□□□□□ -0.14
RTN3-203ENST00000341307 ZDHHC9Q9Y397 364 aa14.19□□□□□ -0.14
RTN3-203ENST00000341307 KIF24Q5T7B8 1368 aa14.19□□□□□ -0.14
RTN3-203ENST00000341307 ADCY5O95622 1261 aa14.19□□□□□ -0.14
RTN3-203ENST00000341307 MYCBPQ99417 103 aaPredicted RBP14.19□□□□□ -0.14
RTN3-203ENST00000341307 CARD10Q9BWT7 1032 aa14.19□□□□□ -0.14
RTN3-203ENST00000341307 ZBTB7BO15156 539 aaPredicted RBP14.18□□□□□ -0.14
RTN3-203ENST00000341307 NCAPGQ9BPX3 1015 aa14.18□□□□□ -0.14
RTN3-203ENST00000341307 RASSF4Q9H2L5 321 aa14.18□□□□□ -0.14
RTN3-203ENST00000341307 GNAT3A8MTJ3 354 aa14.18□□□□□ -0.14
RTN3-203ENST00000341307 ARHGAP45Q92619 1136 aa14.18□□□□□ -0.14
RTN3-203ENST00000341307 C8orf37Q96NL8 207 aa14.18□□□□□ -0.14
RTN3-203ENST00000341307 TRPM3Q9HCF6 1732 aaPredicted RBP14.18□□□□□ -0.14
RTN3-203ENST00000341307 ICE2Q659A1 982 aa14.17□□□□□ -0.14
RTN3-203ENST00000341307 KCNH5Q8NCM2 988 aa14.17□□□□□ -0.14
RTN3-203ENST00000341307 IL17REQ8NFR9 667 aa14.17□□□□□ -0.14
RTN3-203ENST00000341307 ZNF446Q9NWS9 450 aa14.17□□□□□ -0.14
RTN3-203ENST00000341307 ABCC4O15439 1325 aa14.17□□□□□ -0.14
RTN3-203ENST00000341307 GYS2P54840 703 aa14.17□□□□□ -0.14
RTN3-203ENST00000341307 CHRNA2Q15822 529 aa14.17□□□□□ -0.14
RTN3-203ENST00000341307 UVSSAQ2YD98 709 aa14.17□□□□□ -0.14
RTN3-203ENST00000341307 KMT5BQ4FZB7 885 aa14.17□□□□□ -0.14
RTN3-203ENST00000341307 RTL1A6NKG5 1358 aa14.17□□□□□ -0.14
RTN3-203ENST00000341307 RGPD2P0DJD1 1756 aa14.17□□□□□ -0.14
RTN3-203ENST00000341307 HDAC1Q13547 482 aaPredicted RBP14.16□□□□□ -0.14
RTN3-203ENST00000341307 RBM6P78332 1123 aaKnown RBP14.16□□□□□ -0.14
RTN3-203ENST00000341307 BANK1Q8NDB2 785 aa14.16□□□□□ -0.14
RTN3-203ENST00000341307 NECTIN2Q92692 538 aa14.16□□□□□ -0.14
RTN3-203ENST00000341307 AXIN2Q9Y2T1 843 aa14.16□□□□□ -0.14
RTN3-203ENST00000341307 MBD3O95983 291 aa14.15□□□□□ -0.14
RTN3-203ENST00000341307 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.15□□□□□ -0.14
RTN3-203ENST00000341307 KIAA0232Q92628 1395 aa14.15□□□□□ -0.14
RTN3-203ENST00000341307 PATL2C9JE40 543 aaKnown RBP14.15□□□□□ -0.14
RTN3-203ENST00000341307 REC8O95072 547 aa14.15□□□□□ -0.14
RTN3-203ENST00000341307 SLC4A2P04920 1241 aa14.15□□□□□ -0.14
RTN3-203ENST00000341307 MEX3CQ5U5Q3 659 aaKnown RBP14.15□□□□□ -0.14
RTN3-203ENST00000341307 ARHGEF25Q86VW2 580 aa14.15□□□□□ -0.14
RTN3-203ENST00000341307 KIF1BPQ96EK5 621 aa14.15□□□□□ -0.14
RTN3-203ENST00000341307 MAP3K5Q99683 1374 aa14.15□□□□□ -0.15
RTN3-203ENST00000341307 SMTNL1A8MU46 457 aa14.14□□□□□ -0.15
RTN3-203ENST00000341307 CNKSR2Q8WXI2 1034 aa14.14□□□□□ -0.15
RTN3-203ENST00000341307 GUCY2CP25092 1073 aa14.14□□□□□ -0.15
RTN3-203ENST00000341307 G2E3Q7L622 706 aa14.14□□□□□ -0.15
RTN3-203ENST00000341307 API5Q9BZZ5 524 aaKnown RBP14.14□□□□□ -0.15
RTN3-203ENST00000341307 MED1Q15648 1581 aaPredicted RBP14.14□□□□□ -0.15
RTN3-203ENST00000341307 TRIM66O15016 1216 aa14.13□□□□□ -0.15
RTN3-203ENST00000341307 CTR9Q6PD62 1173 aa14.13□□□□□ -0.15
RTN3-203ENST00000341307 ZNF397Q8NF99 534 aaPredicted RBP14.13□□□□□ -0.15
RTN3-203ENST00000341307 LGR6Q9HBX8 967 aa14.13□□□□□ -0.15
RTN3-203ENST00000341307 RGS17Q9UGC6 210 aaPredicted RBP14.13□□□□□ -0.15
RTN3-203ENST00000341307 ALS2Q96Q42 1657 aa14.13□□□□□ -0.15
RTN3-203ENST00000341307 NOL10Q9BSC4 688 aaKnown RBP14.13□□□□□ -0.15
RTN3-203ENST00000341307 RGS12O14924 1447 aa14.13□□□□□ -0.15
RTN3-203ENST00000341307 SYT10Q6XYQ8 523 aa14.12□□□□□ -0.15
RTN3-203ENST00000341307 SIRT2Q8IXJ6 389 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms