RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 COL14A1Q05707 1796 aaKnown RBP18.41■□□□□ 0.54
PERM1-201ENST00000341290 NWD2Q9ULI1 1742 aa18.41■□□□□ 0.54
PERM1-201ENST00000341290 CPDO75976 1380 aa18.4■□□□□ 0.54
PERM1-201ENST00000341290 FLT4P35916 1363 aa18.4■□□□□ 0.54
PERM1-201ENST00000341290 HS1BP3Q53T59 392 aa18.4■□□□□ 0.54
PERM1-201ENST00000341290 ZNF500O60304 480 aaPredicted RBP18.4■□□□□ 0.54
PERM1-201ENST00000341290 CCDC39Q9UFE4 941 aa18.39■□□□□ 0.54
PERM1-201ENST00000341290 STAP2Q9UGK3 403 aa18.39■□□□□ 0.54
PERM1-201ENST00000341290 USP25Q9UHP3 1055 aa18.39■□□□□ 0.54
PERM1-201ENST00000341290 FIBPO43427 364 aa18.39■□□□□ 0.53
PERM1-201ENST00000341290 ANAPC15P60006 121 aa18.39■□□□□ 0.53
PERM1-201ENST00000341290 INTS4Q96HW7 963 aaKnown RBP18.39■□□□□ 0.53
PERM1-201ENST00000341290 SOS1Q07889 1333 aaPredicted RBP18.39■□□□□ 0.53
PERM1-201ENST00000341290 NRAPQ86VF7 1730 aa18.39■□□□□ 0.53
PERM1-201ENST00000341290 HSPA4P34932 840 aa18.39■□□□□ 0.53
PERM1-201ENST00000341290 RHPN1Q8TCX5 695 aa18.39■□□□□ 0.53
PERM1-201ENST00000341290 JARID2Q92833 1246 aaPredicted RBP18.39■□□□□ 0.53
PERM1-201ENST00000341290 IGSF1Q8N6C5 1336 aa18.39■□□□□ 0.53
PERM1-201ENST00000341290 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.38■□□□□ 0.53
PERM1-201ENST00000341290 AK2P54819 239 aa18.38■□□□□ 0.53
PERM1-201ENST00000341290 C17orf53Q8N3J3 647 aaPredicted RBP18.38■□□□□ 0.53
PERM1-201ENST00000341290 SNX14Q9Y5W7 946 aa18.38■□□□□ 0.53
PERM1-201ENST00000341290 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.38■□□□□ 0.53
PERM1-201ENST00000341290 RGPD5Q99666 1765 aa18.37■□□□□ 0.53
PERM1-201ENST00000341290 OS9Q13438 667 aaPredicted RBP18.37■□□□□ 0.53
PERM1-201ENST00000341290 TAF7Q15545 349 aaPredicted RBP18.37■□□□□ 0.53
PERM1-201ENST00000341290 WDR33Q9C0J8 1336 aaKnown RBP18.37■□□□□ 0.53
PERM1-201ENST00000341290 DNTTIP2Q5QJE6 756 aaKnown RBP18.37■□□□□ 0.53
PERM1-201ENST00000341290 SYAP1Q96A49 352 aaPredicted RBP18.37■□□□□ 0.53
PERM1-201ENST00000341290 KDRP35968 1356 aa18.37■□□□□ 0.53
PERM1-201ENST00000341290 PLCH1Q4KWH8 1693 aa18.36■□□□□ 0.53
PERM1-201ENST00000341290 HCLS1P14317 486 aaPredicted RBP18.36■□□□□ 0.53
PERM1-201ENST00000341290 PI4K2BQ8TCG2 481 aa18.36■□□□□ 0.53
PERM1-201ENST00000341290 TCHHQ07283 1943 aa18.36■□□□□ 0.53
PERM1-201ENST00000341290 KCNQ3O43525 872 aa18.36■□□□□ 0.53
PERM1-201ENST00000341290 LARGE1O95461 756 aa18.36■□□□□ 0.53
PERM1-201ENST00000341290 HOXC9P31274 260 aa18.36■□□□□ 0.53
PERM1-201ENST00000341290 SSH3Q8TE77 659 aa18.36■□□□□ 0.53
PERM1-201ENST00000341290 NCAPD2Q15021 1401 aa18.35■□□□□ 0.53
PERM1-201ENST00000341290 PI4KAP2A4QPH2 592 aa18.35■□□□□ 0.53
PERM1-201ENST00000341290 CASTP20810 708 aaKnown RBP18.35■□□□□ 0.53
PERM1-201ENST00000341290 RUFY3Q7L099 469 aa18.35■□□□□ 0.53
PERM1-201ENST00000341290 PI4KAP1Q8N8J0 262 aa18.35■□□□□ 0.53
PERM1-201ENST00000341290 CHPF2Q9P2E5 772 aa18.35■□□□□ 0.53
PERM1-201ENST00000341290 RPAP1Q9BWH6 1393 aaPredicted RBP18.35■□□□□ 0.53
PERM1-201ENST00000341290 WNK3Q9BYP7 1800 aa18.35■□□□□ 0.53
PERM1-201ENST00000341290 SGSM2O43147 1006 aa18.35■□□□□ 0.53
PERM1-201ENST00000341290 PDE4CQ08493 712 aa18.35■□□□□ 0.53
PERM1-201ENST00000341290 LGR6Q9HBX8 967 aa18.35■□□□□ 0.53
PERM1-201ENST00000341290 CHMP3Q9Y3E7 222 aa18.35■□□□□ 0.53
PERM1-201ENST00000341290 UBAP1LF5GYI3 381 aa18.34■□□□□ 0.53
PERM1-201ENST00000341290 SYT1P21579 422 aa18.34■□□□□ 0.53
PERM1-201ENST00000341290 ABTB2Q8N961 1025 aa18.34■□□□□ 0.53
PERM1-201ENST00000341290 TTC12Q9H892 705 aaPredicted RBP18.34■□□□□ 0.53
PERM1-201ENST00000341290 CCDC83Q8IWF9 413 aa18.34■□□□□ 0.53
PERM1-201ENST00000341290 KCNH5Q8NCM2 988 aa18.34■□□□□ 0.53
PERM1-201ENST00000341290 TSC1Q92574 1164 aa18.34■□□□□ 0.53
PERM1-201ENST00000341290 LRRC59Q96AG4 307 aaKnown RBP18.33■□□□□ 0.53
PERM1-201ENST00000341290 GIMAP6Q6P9H5 292 aa18.33■□□□□ 0.52
PERM1-201ENST00000341290 LSG1Q9H089 658 aaKnown RBP18.33■□□□□ 0.52
PERM1-201ENST00000341290 SMC3Q9UQE7 1217 aa18.33■□□□□ 0.52
PERM1-201ENST00000341290 RAD50Q92878 1312 aa18.32■□□□□ 0.52
PERM1-201ENST00000341290 STX6O43752 255 aa18.32■□□□□ 0.52
PERM1-201ENST00000341290 ZSCAN22P10073 491 aaPredicted RBP18.32■□□□□ 0.52
PERM1-201ENST00000341290 ADCK5Q3MIX3 580 aa18.32■□□□□ 0.52
PERM1-201ENST00000341290 PA2G4Q9UQ80 394 aaKnown RBP18.32■□□□□ 0.52
PERM1-201ENST00000341290 MAP3K5Q99683 1374 aa18.32■□□□□ 0.52
PERM1-201ENST00000341290 PLEKHG2Q9H7P9 1386 aa18.32■□□□□ 0.52
PERM1-201ENST00000341290 PTH1RQ03431 593 aa18.32■□□□□ 0.52
PERM1-201ENST00000341290 PRPF40BQ6NWY9 871 aaKnown RBP18.32■□□□□ 0.52
PERM1-201ENST00000341290 CNTROBQ8N137 903 aa18.32■□□□□ 0.52
PERM1-201ENST00000341290 FAM177BA6PVY3 158 aa18.31■□□□□ 0.52
PERM1-201ENST00000341290 ADCY5O95622 1261 aa18.31■□□□□ 0.52
PERM1-201ENST00000341290 DNM1Q05193 864 aaKnown RBP18.31■□□□□ 0.52
PERM1-201ENST00000341290 KIF1BPQ96EK5 621 aa18.31■□□□□ 0.52
PERM1-201ENST00000341290 LRRC37A3O60309 1634 aa18.31■□□□□ 0.52
PERM1-201ENST00000341290 PHF14O94880 888 aa18.31■□□□□ 0.52
PERM1-201ENST00000341290 COL9A3Q14050 684 aaPredicted RBP18.31■□□□□ 0.52
PERM1-201ENST00000341290 NECAB1Q8N987 351 aa18.31■□□□□ 0.52
PERM1-201ENST00000341290 JAKMIP1Q96N16 626 aaKnown RBP18.31■□□□□ 0.52
PERM1-201ENST00000341290 LIMCH1Q9UPQ0 1083 aa18.31■□□□□ 0.52
PERM1-201ENST00000341290 VPS37CA5D8V6 355 aaPredicted RBP18.3■□□□□ 0.52
PERM1-201ENST00000341290 KIAA2012Q0VF49 1180 aa18.3■□□□□ 0.52
PERM1-201ENST00000341290 TTC14Q96N46 770 aa18.3■□□□□ 0.52
PERM1-201ENST00000341290 DIAPH3Q9NSV4 1193 aa18.3■□□□□ 0.52
PERM1-201ENST00000341290 CSPP1Q1MSJ5 1256 aa18.3■□□□□ 0.52
PERM1-201ENST00000341290 DDX17Q92841 729 aaKnown RBP18.3■□□□□ 0.52
PERM1-201ENST00000341290 TCEANC2Q96MN5 208 aa18.3■□□□□ 0.52
PERM1-201ENST00000341290 MAP7D2Q96T17 732 aa18.3■□□□□ 0.52
PERM1-201ENST00000341290 JCADQ9P266 1359 aa18.29■□□□□ 0.52
PERM1-201ENST00000341290 CCDC183Q5T5S1 534 aa18.29■□□□□ 0.52
PERM1-201ENST00000341290 SMAP1Q8IYB5 467 aaPredicted RBP18.29■□□□□ 0.52
PERM1-201ENST00000341290 RAB11FIP3O75154 756 aa18.29■□□□□ 0.52
PERM1-201ENST00000341290 GJB2P29033 226 aa18.29■□□□□ 0.52
PERM1-201ENST00000341290 POLA2Q14181 598 aa18.29■□□□□ 0.52
PERM1-201ENST00000341290 HTATSF1O43719 755 aaKnown RBP18.28■□□□□ 0.52
PERM1-201ENST00000341290 FERMT3Q86UX7 667 aa18.28■□□□□ 0.52
PERM1-201ENST00000341290 DNAAF4Q8WXU2 420 aa18.28■□□□□ 0.52
PERM1-201ENST00000341290 RGPD2P0DJD1 1756 aa18.28■□□□□ 0.52
PERM1-201ENST00000341290 F13A1P00488 732 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms