RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 A1BGP04217 495 aa22.28■■□□□ 1.16
NECTIN1-202ENST00000340882 EAPPQ56P03 285 aaPredicted RBP22.28■■□□□ 1.16
NECTIN1-202ENST00000340882 OLFM4Q6UX06 510 aa22.28■■□□□ 1.16
NECTIN1-202ENST00000340882 TTC5Q8N0Z6 440 aa22.28■■□□□ 1.16
NECTIN1-202ENST00000340882 HSPA8P11142 646 aaKnown RBP22.27■■□□□ 1.16
NECTIN1-202ENST00000340882 IL6STP40189 918 aaPredicted RBP22.27■■□□□ 1.16
NECTIN1-202ENST00000340882 MASTLQ96GX5 879 aa22.27■■□□□ 1.16
NECTIN1-202ENST00000340882 SETDB2Q96T68 719 aa22.27■■□□□ 1.16
NECTIN1-202ENST00000340882 FAM161AQ3B820 660 aa22.26■■□□□ 1.15
NECTIN1-202ENST00000340882 ZNF790Q6PG37 636 aa22.26■■□□□ 1.15
NECTIN1-202ENST00000340882 IL17REQ8NFR9 667 aa22.26■■□□□ 1.15
NECTIN1-202ENST00000340882 ABHD8Q96I13 439 aa22.26■■□□□ 1.15
NECTIN1-202ENST00000340882 AMER1Q5JTC6 1135 aaPredicted RBP22.25■■□□□ 1.15
NECTIN1-202ENST00000340882 ZNF277Q9NRM2 450 aaPredicted RBP22.25■■□□□ 1.15
NECTIN1-202ENST00000340882 CLEC11AQ9Y240 323 aa22.25■■□□□ 1.15
NECTIN1-202ENST00000340882 RASSF10A6NK89 507 aa22.24■■□□□ 1.15
NECTIN1-202ENST00000340882 PIP4K2AP48426 406 aaPredicted RBP22.24■■□□□ 1.15
NECTIN1-202ENST00000340882 ST5P78524 1137 aa22.24■■□□□ 1.15
NECTIN1-202ENST00000340882 SOGA3Q5TF21 947 aa22.24■■□□□ 1.15
NECTIN1-202ENST00000340882 MAP1SQ66K74 1059 aaPredicted RBP22.24■■□□□ 1.15
NECTIN1-202ENST00000340882 KNSTRNQ9Y448 316 aa22.24■■□□□ 1.15
NECTIN1-202ENST00000340882 NPHP1O15259 732 aa22.23■■□□□ 1.15
NECTIN1-202ENST00000340882 KCNQ3O43525 872 aa22.23■■□□□ 1.15
NECTIN1-202ENST00000340882 EPHX2P34913 555 aa22.23■■□□□ 1.15
NECTIN1-202ENST00000340882 DEFB115Q30KQ5 88 aa22.23■■□□□ 1.15
NECTIN1-202ENST00000340882 HACL1Q9UJ83 578 aa22.23■■□□□ 1.15
NECTIN1-202ENST00000340882 EIF4G2P78344 907 aaKnown RBP eCLIP22.22■■□□□ 1.15
NECTIN1-202ENST00000340882 CCDC93Q567U6 631 aa22.22■■□□□ 1.15
NECTIN1-202ENST00000340882 TEX13AQ9BXU3 409 aaPredicted RBP22.22■■□□□ 1.15
NECTIN1-202ENST00000340882 TIMELESSQ9UNS1 1208 aa22.22■■□□□ 1.15
NECTIN1-202ENST00000340882 RNF123Q5XPI4 1314 aa22.22■■□□□ 1.15
NECTIN1-202ENST00000340882 FKBP4Q02790 459 aaKnown RBP eCLIP22.21■■□□□ 1.15
NECTIN1-202ENST00000340882 DZIP3Q86Y13 1208 aaKnown RBP22.21■■□□□ 1.15
NECTIN1-202ENST00000340882 CNTROBQ8N137 903 aa22.21■■□□□ 1.15
NECTIN1-202ENST00000340882 WDR33Q9C0J8 1336 aaKnown RBP22.21■■□□□ 1.15
NECTIN1-202ENST00000340882 LTBP1Q14766 1721 aa22.2■■□□□ 1.14
NECTIN1-202ENST00000340882 FMR1Q06787 632 aaKnown RBP eCLIP22.2■■□□□ 1.14
NECTIN1-202ENST00000340882 DIAPH1O60610 1272 aaKnown RBP22.19■■□□□ 1.14
NECTIN1-202ENST00000340882 TEFQ10587 303 aa22.19■■□□□ 1.14
NECTIN1-202ENST00000340882 THSD7BQ9C0I4 1608 aa22.19■■□□□ 1.14
NECTIN1-202ENST00000340882 COL4A5P29400 1685 aa22.18■■□□□ 1.14
NECTIN1-202ENST00000340882 PRAMEF22A3QJZ6 481 aa22.18■■□□□ 1.14
NECTIN1-202ENST00000340882 NPR1P16066 1061 aa22.18■■□□□ 1.14
NECTIN1-202ENST00000340882 NBPF5PQ86XG9 351 aaPredicted RBP22.18■■□□□ 1.14
NECTIN1-202ENST00000340882 FMNL2Q96PY5 1086 aa22.18■■□□□ 1.14
NECTIN1-202ENST00000340882 USP16Q9Y5T5 823 aa22.18■■□□□ 1.14
NECTIN1-202ENST00000340882 KLRG2A4D1S0 409 aaPredicted RBP22.17■■□□□ 1.14
NECTIN1-202ENST00000340882 FZD9O00144 591 aa22.17■■□□□ 1.14
NECTIN1-202ENST00000340882 COL3A1P02461 1466 aaPredicted RBP22.16■■□□□ 1.14
NECTIN1-202ENST00000340882 TRPM7Q96QT4 1865 aa22.16■■□□□ 1.14
NECTIN1-202ENST00000340882 GNAT3A8MTJ3 354 aa22.16■■□□□ 1.14
NECTIN1-202ENST00000340882 ABT1Q9ULW3 272 aaKnown RBP22.16■■□□□ 1.14
NECTIN1-202ENST00000340882 SNED1Q8TER0 1413 aa22.15■■□□□ 1.14
NECTIN1-202ENST00000340882 IARSP41252 1262 aaKnown RBP22.15■■□□□ 1.14
NECTIN1-202ENST00000340882 MAP2K1Q02750 393 aaPredicted RBP22.15■■□□□ 1.14
NECTIN1-202ENST00000340882 PNMA8AQ86V59 439 aaPredicted RBP22.15■■□□□ 1.14
NECTIN1-202ENST00000340882 SYNE4Q8N205 404 aa22.15■■□□□ 1.14
NECTIN1-202ENST00000340882 NPM2Q86SE8 214 aaKnown RBP22.14■■□□□ 1.13
NECTIN1-202ENST00000340882 DDX21Q9NR30 783 aaKnown RBP eCLIP22.14■■□□□ 1.13
NECTIN1-202ENST00000340882 CEMIPQ8WUJ3 1361 aa22.13■■□□□ 1.13
NECTIN1-202ENST00000340882 FAM177BA6PVY3 158 aa22.13■■□□□ 1.13
NECTIN1-202ENST00000340882 CCDC85CA6NKD9 419 aa22.12■■□□□ 1.13
NECTIN1-202ENST00000340882 CLEC4GQ6UXB4 293 aa22.12■■□□□ 1.13
NECTIN1-202ENST00000340882 RTKN2Q8IZC4 609 aa22.12■■□□□ 1.13
NECTIN1-202ENST00000340882 GPC2Q8N158 579 aa22.12■■□□□ 1.13
NECTIN1-202ENST00000340882 BTBD11A6QL63 1104 aa22.11■■□□□ 1.13
NECTIN1-202ENST00000340882 CYP4F22Q6NT55 531 aa22.11■■□□□ 1.13
NECTIN1-202ENST00000340882 SLC51AQ86UW1 340 aa22.11■■□□□ 1.13
NECTIN1-202ENST00000340882 TSKSQ9UJT2 592 aa22.11■■□□□ 1.13
NECTIN1-202ENST00000340882 RGS19P49795 217 aa22.1■■□□□ 1.13
NECTIN1-202ENST00000340882 CC2D1BQ5T0F9 858 aaKnown RBP22.1■■□□□ 1.13
NECTIN1-202ENST00000340882 GAS2L2Q8NHY3 880 aa22.1■■□□□ 1.13
NECTIN1-202ENST00000340882 CAPNS2Q96L46 248 aa22.1■■□□□ 1.13
NECTIN1-202ENST00000340882 NIP7Q9Y221 180 aaKnown RBP eCLIP22.1■■□□□ 1.13
NECTIN1-202ENST00000340882 CASP8AP2Q9UKL3 1982 aa22.1■■□□□ 1.13
NECTIN1-202ENST00000340882 NBPF26B4DH59 902 aa22.09■■□□□ 1.13
NECTIN1-202ENST00000340882 U2SURPO15042 1029 aaKnown RBP22.09■■□□□ 1.13
NECTIN1-202ENST00000340882 MLLT1Q03111 559 aaPredicted RBP22.09■■□□□ 1.13
NECTIN1-202ENST00000340882 GRM1Q13255 1194 aa22.09■■□□□ 1.13
NECTIN1-202ENST00000340882 CST9Q5W186 159 aa22.09■■□□□ 1.13
NECTIN1-202ENST00000340882 NBPF10Q6P3W6 841 aaKnown RBP22.09■■□□□ 1.13
NECTIN1-202ENST00000340882 TPTE2Q6XPS3 522 aa22.09■■□□□ 1.13
NECTIN1-202ENST00000340882 NBPF15Q8N660 670 aa22.09■■□□□ 1.13
NECTIN1-202ENST00000340882 PHACTR3Q96KR7 559 aa22.09■■□□□ 1.13
NECTIN1-202ENST00000340882 GJA3Q9Y6H8 435 aa22.09■■□□□ 1.13
NECTIN1-202ENST00000340882 TRAF5O00463 557 aa22.08■■□□□ 1.13
NECTIN1-202ENST00000340882 TNRC18O15417 2968 aaPredicted RBP22.08■■□□□ 1.13
NECTIN1-202ENST00000340882 PER1O15534 1290 aaPredicted RBP22.08■■□□□ 1.13
NECTIN1-202ENST00000340882 EPS15P42566 896 aa22.08■■□□□ 1.13
NECTIN1-202ENST00000340882 HLFQ16534 295 aa22.08■■□□□ 1.13
NECTIN1-202ENST00000340882 SCNN1DP51172 638 aa22.07■■□□□ 1.12
NECTIN1-202ENST00000340882 PAXIP1Q6ZW49 1069 aaPredicted RBP22.07■■□□□ 1.12
NECTIN1-202ENST00000340882 GPR101Q96P66 508 aaPredicted RBP22.07■■□□□ 1.12
NECTIN1-202ENST00000340882 ZNF652Q9Y2D9 606 aa22.07■■□□□ 1.12
NECTIN1-202ENST00000340882 NUP98P52948 1817 aa22.06■■□□□ 1.12
NECTIN1-202ENST00000340882 AOC2O75106 756 aa22.06■■□□□ 1.12
NECTIN1-202ENST00000340882 ALDH1B1P30837 517 aa22.06■■□□□ 1.12
NECTIN1-202ENST00000340882 PSMD1Q99460 953 aa22.06■■□□□ 1.12
NECTIN1-202ENST00000340882 ABCC12Q96J65 1359 aa22.06■■□□□ 1.12
NECTIN1-202ENST00000340882 JDP2Q8WYK2 163 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms