RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 ATP2A1O14983 1001 aa15.9■□□□□ 0.14
PDE4D-203ENST00000340635 NLRP5P59047 1200 aa15.9■□□□□ 0.14
PDE4D-203ENST00000340635 CCDC77Q9BR77 488 aa15.9■□□□□ 0.14
PDE4D-203ENST00000340635 SELENOOQ9BVL4 669 aa15.9■□□□□ 0.14
PDE4D-203ENST00000340635 IQCA1Q86XH1 822 aa15.9■□□□□ 0.14
PDE4D-203ENST00000340635 SEPT10Q9P0V9 454 aa15.9■□□□□ 0.14
PDE4D-203ENST00000340635 BAZ1AQ9NRL2 1556 aaPredicted RBP15.9■□□□□ 0.14
PDE4D-203ENST00000340635 CTAGE5O15320 804 aa15.9■□□□□ 0.14
PDE4D-203ENST00000340635 GSDMDP57764 484 aa15.9■□□□□ 0.14
PDE4D-203ENST00000340635 CCDC110Q8TBZ0 833 aa15.9■□□□□ 0.14
PDE4D-203ENST00000340635 SLC12A7Q9Y666 1083 aa15.9■□□□□ 0.14
PDE4D-203ENST00000340635 METTL24Q5JXM2 366 aa15.9■□□□□ 0.14
PDE4D-203ENST00000340635 TCP11L1Q9NUJ3 509 aa15.9■□□□□ 0.14
PDE4D-203ENST00000340635 IVLP07476 585 aa15.9■□□□□ 0.14
PDE4D-203ENST00000340635 SARNPP82979 210 aaKnown RBP15.89■□□□□ 0.13
PDE4D-203ENST00000340635 ZNF652Q9Y2D9 606 aa15.89■□□□□ 0.13
PDE4D-203ENST00000340635 STIM2Q9P246 746 aa15.89■□□□□ 0.13
PDE4D-203ENST00000340635 RANBP6O60518 1105 aaKnown RBP15.89■□□□□ 0.13
PDE4D-203ENST00000340635 CRCPO75575 148 aa15.89■□□□□ 0.13
PDE4D-203ENST00000340635 CCT6BQ92526 530 aa15.89■□□□□ 0.13
PDE4D-203ENST00000340635 AKAP2Q9Y2D5 859 aa15.89■□□□□ 0.13
PDE4D-203ENST00000340635 VTI1AQ96AJ9 217 aa15.88■□□□□ 0.13
PDE4D-203ENST00000340635 SLF2Q8IX21 1173 aa15.88■□□□□ 0.13
PDE4D-203ENST00000340635 GBP7Q8N8V2 638 aaPredicted RBP15.88■□□□□ 0.13
PDE4D-203ENST00000340635 CCDC12Q8WUD4 166 aaPredicted RBP15.88■□□□□ 0.13
PDE4D-203ENST00000340635 PRKAR2BP31323 418 aa15.88■□□□□ 0.13
PDE4D-203ENST00000340635 TMC6Q7Z403 805 aa15.88■□□□□ 0.13
PDE4D-203ENST00000340635 ZPR1O75312 459 aa15.88■□□□□ 0.13
PDE4D-203ENST00000340635 CATIPQ7Z7H3 387 aa15.88■□□□□ 0.13
PDE4D-203ENST00000340635 USP37Q86T82 979 aa15.88■□□□□ 0.13
PDE4D-203ENST00000340635 CCDC85AQ96PX6 553 aaPredicted RBP15.88■□□□□ 0.13
PDE4D-203ENST00000340635 SCAND2PQ9GZW5 306 aaPredicted RBP15.88■□□□□ 0.13
PDE4D-203ENST00000340635 RAD54L2Q9Y4B4 1467 aa15.87■□□□□ 0.13
PDE4D-203ENST00000340635 KRT13P13646 458 aa15.87■□□□□ 0.13
PDE4D-203ENST00000340635 SNW1Q13573 536 aaKnown RBP15.87■□□□□ 0.13
PDE4D-203ENST00000340635 NAA25Q14CX7 972 aa15.87■□□□□ 0.13
PDE4D-203ENST00000340635 PPP4R3BQ5MIZ7 849 aa15.87■□□□□ 0.13
PDE4D-203ENST00000340635 WDR63Q8IWG1 891 aa15.87■□□□□ 0.13
PDE4D-203ENST00000340635 PHACTR2O75167 634 aa15.87■□□□□ 0.13
PDE4D-203ENST00000340635 GAS8O95995 478 aa15.87■□□□□ 0.13
PDE4D-203ENST00000340635 TACC1O75410 805 aa15.87■□□□□ 0.13
PDE4D-203ENST00000340635 TRIM7Q9C029 511 aa15.87■□□□□ 0.13
PDE4D-203ENST00000340635 BCAR3O75815 825 aa15.87■□□□□ 0.13
PDE4D-203ENST00000340635 SEPT14Q6ZU15 432 aa15.87■□□□□ 0.13
PDE4D-203ENST00000340635 BTBD11A6QL63 1104 aa15.87■□□□□ 0.13
PDE4D-203ENST00000340635 PDE3AQ14432 1141 aa15.87■□□□□ 0.13
PDE4D-203ENST00000340635 GEN1Q17RS7 908 aa15.87■□□□□ 0.13
PDE4D-203ENST00000340635 RSPH3Q86UC2 560 aa15.87■□□□□ 0.13
PDE4D-203ENST00000340635 CEP57Q86XR8 500 aa15.87■□□□□ 0.13
PDE4D-203ENST00000340635 PRPHP41219 470 aa15.86■□□□□ 0.13
PDE4D-203ENST00000340635 RFC1P35251 1148 aaPredicted RBP15.86■□□□□ 0.13
PDE4D-203ENST00000340635 EXOSC9Q06265 439 aaKnown RBP15.86■□□□□ 0.13
PDE4D-203ENST00000340635 GOLIM4O00461 696 aa15.86■□□□□ 0.13
PDE4D-203ENST00000340635 CHD1LQ86WJ1 897 aa15.86■□□□□ 0.13
PDE4D-203ENST00000340635 TBCAO75347 108 aaKnown RBP15.86■□□□□ 0.13
PDE4D-203ENST00000340635 ALDH3A1P30838 453 aa15.86■□□□□ 0.13
PDE4D-203ENST00000340635 KIF5BP33176 963 aa15.86■□□□□ 0.13
PDE4D-203ENST00000340635 CCDC121Q6ZUS5 278 aa15.86■□□□□ 0.13
PDE4D-203ENST00000340635 CKAP2LQ8IYA6 745 aa15.86■□□□□ 0.13
PDE4D-203ENST00000340635 IDEP14735 1019 aa15.86■□□□□ 0.13
PDE4D-203ENST00000340635 PYM1Q9BRP8 204 aaKnown RBP15.86■□□□□ 0.13
PDE4D-203ENST00000340635 CCDC82Q8N4S0 544 aa15.86■□□□□ 0.13
PDE4D-203ENST00000340635 ATRIPQ8WXE1 791 aa15.86■□□□□ 0.13
PDE4D-203ENST00000340635 GOLGA8AA7E2F4 631 aa15.85■□□□□ 0.13
PDE4D-203ENST00000340635 GOLGA8BA8MQT2 603 aa15.85■□□□□ 0.13
PDE4D-203ENST00000340635 FERMT3Q86UX7 667 aa15.85■□□□□ 0.13
PDE4D-203ENST00000340635 SELENOSQ9BQE4 189 aa15.85■□□□□ 0.13
PDE4D-203ENST00000340635 TMCO4Q5TGY1 634 aa15.85■□□□□ 0.13
PDE4D-203ENST00000340635 CCDC117Q8IWD4 279 aaPredicted RBP15.85■□□□□ 0.13
PDE4D-203ENST00000340635 HAUS7Q99871 368 aa15.85■□□□□ 0.13
PDE4D-203ENST00000340635 ZHX1Q9UKY1 873 aaPredicted RBP15.85■□□□□ 0.13
PDE4D-203ENST00000340635 ATP2A2P16615 1042 aaKnown RBP15.85■□□□□ 0.13
PDE4D-203ENST00000340635 LRRC27Q9C0I9 530 aa15.85■□□□□ 0.13
PDE4D-203ENST00000340635 ERCC3P19447 782 aa15.85■□□□□ 0.13
PDE4D-203ENST00000340635 TERF1P54274 439 aa15.85■□□□□ 0.13
PDE4D-203ENST00000340635 TAF12Q16514 161 aa15.85■□□□□ 0.13
PDE4D-203ENST00000340635 EXOC1Q9NV70 894 aa15.85■□□□□ 0.13
PDE4D-203ENST00000340635 IRX3P78415 501 aaPredicted RBP15.84■□□□□ 0.13
PDE4D-203ENST00000340635 ZNF530Q6P9A1 599 aaPredicted RBP15.84■□□□□ 0.13
PDE4D-203ENST00000340635 CCDC50Q8IVM0 306 aa15.84■□□□□ 0.13
PDE4D-203ENST00000340635 CPSF2Q9P2I0 782 aaKnown RBP15.84■□□□□ 0.13
PDE4D-203ENST00000340635 CASQ2O14958 399 aaPredicted RBP15.84■□□□□ 0.13
PDE4D-203ENST00000340635 STARD3NLO95772 234 aa15.84■□□□□ 0.13
PDE4D-203ENST00000340635 STX1AQ16623 288 aa15.84■□□□□ 0.13
PDE4D-203ENST00000340635 GUCY1B3Q02153 619 aa15.84■□□□□ 0.13
PDE4D-203ENST00000340635 MCM5P33992 734 aa15.84■□□□□ 0.13
PDE4D-203ENST00000340635 FAM169AQ9Y6X4 670 aa15.84■□□□□ 0.13
PDE4D-203ENST00000340635 CIB2O75838 187 aa15.84■□□□□ 0.13
PDE4D-203ENST00000340635 RSPH14Q9UHP6 348 aa15.84■□□□□ 0.13
PDE4D-203ENST00000340635 CCDC129Q6ZRS4 1044 aa15.83■□□□□ 0.13
PDE4D-203ENST00000340635 STMN2Q93045 179 aa15.83■□□□□ 0.13
PDE4D-203ENST00000340635 ZSWIM4Q9H7M6 989 aa15.83■□□□□ 0.13
PDE4D-203ENST00000340635 EEF2P13639 858 aaKnown RBP15.83■□□□□ 0.13
PDE4D-203ENST00000340635 TCP11L2Q8N4U5 519 aa15.83■□□□□ 0.13
PDE4D-203ENST00000340635 HMGB1P09429 215 aaKnown RBP15.83■□□□□ 0.12
PDE4D-203ENST00000340635 IFIT1P09914 478 aaKnown RBP15.83■□□□□ 0.12
PDE4D-203ENST00000340635 ATF7IPQ6VMQ6 1270 aa15.83■□□□□ 0.12
PDE4D-203ENST00000340635 BRD4O60885 1362 aaPredicted RBP15.83■□□□□ 0.12
PDE4D-203ENST00000340635 MAP3K12Q12852 859 aa15.83■□□□□ 0.12
PDE4D-203ENST00000340635 BACH2Q9BYV9 841 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms