RNA–Protein interactions for RNA: ENST00000340630.9

IFT27-201, Transcript of intraflagellar transport 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFT27, Length 1,113 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT27-201ENST00000340630 MASTLQ96GX5 879 aa24.15■■□□□ 1.46
IFT27-201ENST00000340630 USP16Q9Y5T5 823 aa24.15■■□□□ 1.46
IFT27-201ENST00000340630 PRKAR2BP31323 418 aa24.14■■□□□ 1.45
IFT27-201ENST00000340630 CEMIPQ8WUJ3 1361 aa24.14■■□□□ 1.45
IFT27-201ENST00000340630 NPC1L1Q9UHC9 1359 aa24.14■■□□□ 1.45
IFT27-201ENST00000340630 CHADLQ6NUI6 762 aa24.13■■□□□ 1.45
IFT27-201ENST00000340630 SCN7AQ01118 1682 aa24.13■■□□□ 1.45
IFT27-201ENST00000340630 PRAMEF22A3QJZ6 481 aa24.12■■□□□ 1.45
IFT27-201ENST00000340630 POTEIP0CG38 1075 aa24.12■■□□□ 1.45
IFT27-201ENST00000340630 POTEJP0CG39 1038 aa24.12■■□□□ 1.45
IFT27-201ENST00000340630 ZEB1P37275 1124 aaPredicted RBP24.12■■□□□ 1.45
IFT27-201ENST00000340630 SOGA3Q5TF21 947 aa24.12■■□□□ 1.45
IFT27-201ENST00000340630 COL11A2P13942 1736 aaPredicted RBP24.11■■□□□ 1.45
IFT27-201ENST00000340630 NBPF5PQ86XG9 351 aaPredicted RBP24.11■■□□□ 1.45
IFT27-201ENST00000340630 RSPH6AQ9H0K4 717 aa24.11■■□□□ 1.45
IFT27-201ENST00000340630 CFAP53Q96M91 514 aa24.1■■□□□ 1.45
IFT27-201ENST00000340630 FER1L6Q2WGJ9 1857 aa24.09■■□□□ 1.45
IFT27-201ENST00000340630 CLEC4GQ6UXB4 293 aa24.09■■□□□ 1.45
IFT27-201ENST00000340630 CREBZFQ9NS37 354 aa24.09■■□□□ 1.45
IFT27-201ENST00000340630 MKRN1Q9UHC7 482 aaKnown RBP24.09■■□□□ 1.45
IFT27-201ENST00000340630 SIPA1L3O60292 1781 aaPredicted RBP24.08■■□□□ 1.45
IFT27-201ENST00000340630 SNRPA1P09661 255 aaKnown RBP24.08■■□□□ 1.45
IFT27-201ENST00000340630 MCM10Q7L590 875 aa24.08■■□□□ 1.45
IFT27-201ENST00000340630 RTF1Q92541 710 aaKnown RBP24.08■■□□□ 1.45
IFT27-201ENST00000340630 ZNF652Q9Y2D9 606 aa24.08■■□□□ 1.45
IFT27-201ENST00000340630 SLX4Q8IY92 1834 aa24.07■■□□□ 1.44
IFT27-201ENST00000340630 C7orf43Q8WVR3 580 aa24.07■■□□□ 1.44
IFT27-201ENST00000340630 NUDCQ9Y266 331 aa24.07■■□□□ 1.44
IFT27-201ENST00000340630 NPR1P16066 1061 aa24.06■■□□□ 1.44
IFT27-201ENST00000340630 CCDC93Q567U6 631 aa24.06■■□□□ 1.44
IFT27-201ENST00000340630 IQCA1LA6NCM1 817 aa24.05■■□□□ 1.44
IFT27-201ENST00000340630 FAM177BA6PVY3 158 aa24.05■■□□□ 1.44
IFT27-201ENST00000340630 U2AF1L5P0DN76 240 aaPredicted RBP24.05■■□□□ 1.44
IFT27-201ENST00000340630 U2AF1Q01081 240 aaKnown RBP eCLIP24.05■■□□□ 1.44
IFT27-201ENST00000340630 TPTE2Q6XPS3 522 aa24.05■■□□□ 1.44
IFT27-201ENST00000340630 NIP7Q9Y221 180 aaKnown RBP eCLIP24.05■■□□□ 1.44
IFT27-201ENST00000340630 DICER1Q9UPY3 1922 aaKnown RBP24.05■■□□□ 1.44
IFT27-201ENST00000340630 DCTN1Q14203 1278 aa24.04■■□□□ 1.44
IFT27-201ENST00000340630 NBPF26B4DH59 902 aa24.03■■□□□ 1.44
IFT27-201ENST00000340630 NBPF10Q6P3W6 841 aaKnown RBP24.03■■□□□ 1.44
IFT27-201ENST00000340630 LDHDQ86WU2 507 aa24.03■■□□□ 1.44
IFT27-201ENST00000340630 NBPF15Q8N660 670 aa24.03■■□□□ 1.44
IFT27-201ENST00000340630 TAF1DQ9H5J8 278 aaPredicted RBP24.03■■□□□ 1.44
IFT27-201ENST00000340630 ZNF277Q9NRM2 450 aaPredicted RBP24.03■■□□□ 1.44
IFT27-201ENST00000340630 KLRG2A4D1S0 409 aaPredicted RBP24.02■■□□□ 1.44
IFT27-201ENST00000340630 FKBP4Q02790 459 aaKnown RBP eCLIP24.02■■□□□ 1.44
IFT27-201ENST00000340630 OLFM4Q6UX06 510 aa24.02■■□□□ 1.44
IFT27-201ENST00000340630 L3MBTL3Q96JM7 780 aaPredicted RBP24.02■■□□□ 1.44
IFT27-201ENST00000340630 BCORQ6W2J9 1755 aa24.01■■□□□ 1.43
IFT27-201ENST00000340630 EAPPQ56P03 285 aaPredicted RBP24■■□□□ 1.43
IFT27-201ENST00000340630 CACNA1SQ13698 1873 aa23.99■■□□□ 1.43
IFT27-201ENST00000340630 GTF2E1P29083 439 aaPredicted RBP23.99■■□□□ 1.43
IFT27-201ENST00000340630 HLFQ16534 295 aa23.99■■□□□ 1.43
IFT27-201ENST00000340630 RTKN2Q8IZC4 609 aa23.99■■□□□ 1.43
IFT27-201ENST00000340630 CLEC11AQ9Y240 323 aa23.99■■□□□ 1.43
IFT27-201ENST00000340630 PASKQ96RG2 1323 aa23.99■■□□□ 1.43
IFT27-201ENST00000340630 ZNF541Q9H0D2 1346 aa23.99■■□□□ 1.43
IFT27-201ENST00000340630 MIS18AQ9NYP9 233 aa23.98■■□□□ 1.43
IFT27-201ENST00000340630 CNTNAP1P78357 1384 aa23.98■■□□□ 1.43
IFT27-201ENST00000340630 RGL2O15211 777 aa23.97■■□□□ 1.43
IFT27-201ENST00000340630 PPP2R1AP30153 589 aa23.97■■□□□ 1.43
IFT27-201ENST00000340630 ALDH1B1P30837 517 aa23.97■■□□□ 1.43
IFT27-201ENST00000340630 TAF7Q15545 349 aaPredicted RBP23.97■■□□□ 1.43
IFT27-201ENST00000340630 SYNE4Q8N205 404 aa23.97■■□□□ 1.43
IFT27-201ENST00000340630 HACL1Q9UJ83 578 aa23.97■■□□□ 1.43
IFT27-201ENST00000340630 HTATSF1O43719 755 aaKnown RBP23.96■■□□□ 1.43
IFT27-201ENST00000340630 NGEFQ8N5V2 710 aa23.96■■□□□ 1.43
IFT27-201ENST00000340630 ARFGEF2Q9Y6D5 1785 aa23.96■■□□□ 1.43
IFT27-201ENST00000340630 TMEM88BA6NKF7 163 aa23.95■■□□□ 1.42
IFT27-201ENST00000340630 FOXN1O15353 648 aa23.95■■□□□ 1.42
IFT27-201ENST00000340630 ITGBL1O95965 494 aaPredicted RBP23.95■■□□□ 1.42
IFT27-201ENST00000340630 EPHX2P34913 555 aa23.95■■□□□ 1.42
IFT27-201ENST00000340630 IARSP41252 1262 aaKnown RBP23.95■■□□□ 1.42
IFT27-201ENST00000340630 VEGFBP49765 207 aa23.94■■□□□ 1.42
IFT27-201ENST00000340630 RNF123Q5XPI4 1314 aa23.92■■□□□ 1.42
IFT27-201ENST00000340630 FZD9O00144 591 aa23.92■■□□□ 1.42
IFT27-201ENST00000340630 NUTM1Q86Y26 1132 aa23.92■■□□□ 1.42
IFT27-201ENST00000340630 MAP1SQ66K74 1059 aaPredicted RBP23.91■■□□□ 1.42
IFT27-201ENST00000340630 PNMA8AQ86V59 439 aaPredicted RBP23.91■■□□□ 1.42
IFT27-201ENST00000340630 AIDAQ96BJ3 306 aa23.91■■□□□ 1.42
IFT27-201ENST00000340630 NYXQ9GZU5 481 aa23.91■■□□□ 1.42
IFT27-201ENST00000340630 SCN4AP35499 1836 aa23.91■■□□□ 1.42
IFT27-201ENST00000340630 CNTROBQ8N137 903 aa23.9■■□□□ 1.42
IFT27-201ENST00000340630 JDP2Q8WYK2 163 aa23.9■■□□□ 1.42
IFT27-201ENST00000340630 RRP7AQ9Y3A4 280 aaKnown RBP23.9■■□□□ 1.42
IFT27-201ENST00000340630 GPC2Q8N158 579 aa23.89■■□□□ 1.41
IFT27-201ENST00000340630 PSMD1Q99460 953 aa23.89■■□□□ 1.41
IFT27-201ENST00000340630 ERVV-1B6SEH8 477 aa23.88■■□□□ 1.41
IFT27-201ENST00000340630 CTCFP49711 727 aaPredicted RBP23.88■■□□□ 1.41
IFT27-201ENST00000340630 CRY2Q49AN0 593 aa23.88■■□□□ 1.41
IFT27-201ENST00000340630 PRDM10Q9NQV6 1147 aa23.88■■□□□ 1.41
IFT27-201ENST00000340630 GJA3Q9Y6H8 435 aa23.88■■□□□ 1.41
IFT27-201ENST00000340630 ABCC12Q96J65 1359 aa23.88■■□□□ 1.41
IFT27-201ENST00000340630 NEFMP07197 916 aa23.87■■□□□ 1.41
IFT27-201ENST00000340630 KIF6Q6ZMV9 814 aa23.87■■□□□ 1.41
IFT27-201ENST00000340630 TTLL7Q6ZT98 887 aa23.87■■□□□ 1.41
IFT27-201ENST00000340630 PNISRQ8TF01 805 aaKnown RBP23.87■■□□□ 1.41
IFT27-201ENST00000340630 RPGRQ92834 1020 aaKnown RBP23.87■■□□□ 1.41
IFT27-201ENST00000340630 MAP3K15Q6ZN16 1313 aa23.86■■□□□ 1.41
IFT27-201ENST00000340630 MYL6BP14649 208 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms