RNA–Protein interactions for RNA: ENST00000339948.3

ZNF648-201, Transcript of zinc finger protein 648, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF648, Length 3,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF648-201ENST00000339948 COL9A3Q14050 684 aaPredicted RBP13.78□□□□□ -0.2
ZNF648-201ENST00000339948 PIK3R4Q99570 1358 aa13.78□□□□□ -0.2
ZNF648-201ENST00000339948 COL3A1P02461 1466 aaPredicted RBP13.78□□□□□ -0.2
ZNF648-201ENST00000339948 TMX1Q9H3N1 280 aa13.77□□□□□ -0.2
ZNF648-201ENST00000339948 MTMR6Q9Y217 621 aa13.77□□□□□ -0.2
ZNF648-201ENST00000339948 PPRC1Q5VV67 1664 aaKnown RBP13.77□□□□□ -0.2
ZNF648-201ENST00000339948 TTC21BQ7Z4L5 1316 aa13.77□□□□□ -0.2
ZNF648-201ENST00000339948 RAB11FIP4Q86YS3 637 aa13.77□□□□□ -0.21
ZNF648-201ENST00000339948 RBM8AQ9Y5S9 174 aaKnown RBP13.77□□□□□ -0.21
ZNF648-201ENST00000339948 PIP4K2AP48426 406 aaPredicted RBP13.77□□□□□ -0.21
ZNF648-201ENST00000339948 CWF19L2Q2TBE0 894 aaKnown RBP13.77□□□□□ -0.21
ZNF648-201ENST00000339948 LARP1Q6PKG0 1096 aaKnown RBP13.77□□□□□ -0.21
ZNF648-201ENST00000339948 BLOC1S2Q6QNY1 142 aa13.77□□□□□ -0.21
ZNF648-201ENST00000339948 GPATCH3Q96I76 525 aa13.77□□□□□ -0.21
ZNF648-201ENST00000339948 GNAT3A8MTJ3 354 aa13.76□□□□□ -0.21
ZNF648-201ENST00000339948 ZBTB22O15209 634 aa13.76□□□□□ -0.21
ZNF648-201ENST00000339948 ZSCAN20P17040 1043 aaPredicted RBP13.76□□□□□ -0.21
ZNF648-201ENST00000339948 CBX8Q9HC52 389 aa13.76□□□□□ -0.21
ZNF648-201ENST00000339948 KCNQ3O43525 872 aa13.76□□□□□ -0.21
ZNF648-201ENST00000339948 JAK2O60674 1132 aa13.76□□□□□ -0.21
ZNF648-201ENST00000339948 KIAA1524Q8TCG1 905 aa13.76□□□□□ -0.21
ZNF648-201ENST00000339948 FAM200AQ8TCP9 573 aa13.76□□□□□ -0.21
ZNF648-201ENST00000339948 MPRIPQ6WCQ1 1025 aa13.76□□□□□ -0.21
ZNF648-201ENST00000339948 USP16Q9Y5T5 823 aa13.76□□□□□ -0.21
ZNF648-201ENST00000339948 RAD50Q92878 1312 aa13.75□□□□□ -0.21
ZNF648-201ENST00000339948 BIN1O00499 593 aa13.75□□□□□ -0.21
ZNF648-201ENST00000339948 CCT2P78371 535 aaKnown RBP13.75□□□□□ -0.21
ZNF648-201ENST00000339948 DMTNQ08495 405 aa13.75□□□□□ -0.21
ZNF648-201ENST00000339948 G3BP1Q13283 466 aaKnown RBP eCLIP13.75□□□□□ -0.21
ZNF648-201ENST00000339948 FTOQ9C0B1 505 aaKnown RBP eCLIP13.75□□□□□ -0.21
ZNF648-201ENST00000339948 OSBPL3Q9H4L5 887 aa13.75□□□□□ -0.21
ZNF648-201ENST00000339948 TPCN1Q9ULQ1 816 aa13.75□□□□□ -0.21
ZNF648-201ENST00000339948 ADGRB2O60241 1585 aa13.75□□□□□ -0.21
ZNF648-201ENST00000339948 VGLL3A8MV65 326 aa13.75□□□□□ -0.21
ZNF648-201ENST00000339948 ABCC3O15438 1527 aa13.74□□□□□ -0.21
ZNF648-201ENST00000339948 RPAP1Q9BWH6 1393 aaPredicted RBP13.74□□□□□ -0.21
ZNF648-201ENST00000339948 RGS12O14924 1447 aa13.74□□□□□ -0.21
ZNF648-201ENST00000339948 ADGRB3O60242 1522 aa13.74□□□□□ -0.21
ZNF648-201ENST00000339948 NR1I2O75469 434 aa13.74□□□□□ -0.21
ZNF648-201ENST00000339948 MYL6BP14649 208 aa13.74□□□□□ -0.21
ZNF648-201ENST00000339948 NMIQ13287 307 aaPredicted RBP13.74□□□□□ -0.21
ZNF648-201ENST00000339948 CHST3Q7LGC8 479 aa13.74□□□□□ -0.21
ZNF648-201ENST00000339948 HOMER1Q86YM7 354 aa13.74□□□□□ -0.21
ZNF648-201ENST00000339948 LSG1Q9H089 658 aaKnown RBP13.74□□□□□ -0.21
ZNF648-201ENST00000339948 CAMSAP1Q5T5Y3 1602 aa13.74□□□□□ -0.21
ZNF648-201ENST00000339948 GLRX3O76003 335 aaKnown RBP13.73□□□□□ -0.21
ZNF648-201ENST00000339948 SMC2O95347 1197 aa13.73□□□□□ -0.21
ZNF648-201ENST00000339948 SF3A1Q15459 793 aaKnown RBP13.73□□□□□ -0.21
ZNF648-201ENST00000339948 CCAR2Q8N163 923 aaKnown RBP13.73□□□□□ -0.21
ZNF648-201ENST00000339948 ABTB2Q8N961 1025 aa13.73□□□□□ -0.21
ZNF648-201ENST00000339948 SDF4Q9BRK5 362 aa13.73□□□□□ -0.21
ZNF648-201ENST00000339948 PTPN21Q16825 1174 aa13.73□□□□□ -0.21
ZNF648-201ENST00000339948 HYPKQ9NX55 129 aa13.73□□□□□ -0.21
ZNF648-201ENST00000339948 TAF6LQ9Y6J9 622 aa13.73□□□□□ -0.21
ZNF648-201ENST00000339948 CHGBP05060 677 aa13.73□□□□□ -0.21
ZNF648-201ENST00000339948 CCDC129Q6ZRS4 1044 aa13.73□□□□□ -0.21
ZNF648-201ENST00000339948 PRR36Q9H6K5 1346 aa13.73□□□□□ -0.21
ZNF648-201ENST00000339948 ME1P48163 572 aa13.72□□□□□ -0.21
ZNF648-201ENST00000339948 HSP90AA4PQ58FG1 418 aa13.72□□□□□ -0.21
ZNF648-201ENST00000339948 DNAAF4Q8WXU2 420 aa13.72□□□□□ -0.21
ZNF648-201ENST00000339948 ZFP91Q96JP5 570 aaPredicted RBP13.72□□□□□ -0.21
ZNF648-201ENST00000339948 CD163L1Q9NR16 1453 aa13.72□□□□□ -0.21
ZNF648-201ENST00000339948 ARHGEF40Q8TER5 1519 aa13.72□□□□□ -0.21
ZNF648-201ENST00000339948 CREB3L3Q68CJ9 461 aa13.72□□□□□ -0.21
ZNF648-201ENST00000339948 ZNF330Q9Y3S2 320 aaPredicted RBP13.72□□□□□ -0.21
ZNF648-201ENST00000339948 MRVI1Q9Y6F6 885 aa13.72□□□□□ -0.21
ZNF648-201ENST00000339948 LGR6Q9HBX8 967 aa13.72□□□□□ -0.21
ZNF648-201ENST00000339948 CEP135Q66GS9 1140 aa13.71□□□□□ -0.21
ZNF648-201ENST00000339948 IL17REQ8NFR9 667 aa13.71□□□□□ -0.21
ZNF648-201ENST00000339948 ECHDC1Q9NTX5 307 aa13.71□□□□□ -0.21
ZNF648-201ENST00000339948 CACTINQ8WUQ7 758 aaKnown RBP13.71□□□□□ -0.21
ZNF648-201ENST00000339948 BRF1Q92994 677 aa13.71□□□□□ -0.21
ZNF648-201ENST00000339948 NRXN1Q9ULB1 1477 aa13.71□□□□□ -0.21
ZNF648-201ENST00000339948 FAM69CQ0P6D2 419 aa13.71□□□□□ -0.22
ZNF648-201ENST00000339948 PTPN14Q15678 1187 aa13.71□□□□□ -0.22
ZNF648-201ENST00000339948 PI4K2BQ8TCG2 481 aa13.71□□□□□ -0.22
ZNF648-201ENST00000339948 NEUROD6Q96NK8 337 aa13.71□□□□□ -0.22
ZNF648-201ENST00000339948 MAP3K2Q9Y2U5 619 aa13.71□□□□□ -0.22
ZNF648-201ENST00000339948 YEATS2Q9ULM3 1422 aa13.71□□□□□ -0.22
ZNF648-201ENST00000339948 SKILP12757 684 aa13.7□□□□□ -0.22
ZNF648-201ENST00000339948 BBXQ8WY36 941 aaPredicted RBP13.7□□□□□ -0.22
ZNF648-201ENST00000339948 TLR7Q9NYK1 1049 aaKnown RBP13.7□□□□□ -0.22
ZNF648-201ENST00000339948 METP08581 1390 aa13.7□□□□□ -0.22
ZNF648-201ENST00000339948 USP27XA6NNY8 438 aa13.7□□□□□ -0.22
ZNF648-201ENST00000339948 GNL2Q13823 731 aaKnown RBP13.7□□□□□ -0.22
ZNF648-201ENST00000339948 CCDC73Q6ZRK6 1079 aa13.7□□□□□ -0.22
ZNF648-201ENST00000339948 ELF2Q15723 593 aa13.7□□□□□ -0.22
ZNF648-201ENST00000339948 RNF20Q5VTR2 975 aa13.7□□□□□ -0.22
ZNF648-201ENST00000339948 ZSCAN25Q6NSZ9 544 aa13.7□□□□□ -0.22
ZNF648-201ENST00000339948 ST7Q9NRC1 585 aa13.7□□□□□ -0.22
ZNF648-201ENST00000339948 POLR3GO15318 223 aaPredicted RBP13.69□□□□□ -0.22
ZNF648-201ENST00000339948 NCBP1Q09161 790 aaKnown RBP13.69□□□□□ -0.22
ZNF648-201ENST00000339948 GTF3C6Q969F1 213 aa13.69□□□□□ -0.22
ZNF648-201ENST00000339948 KINO60870 393 aaKnown RBP13.69□□□□□ -0.22
ZNF648-201ENST00000339948 PDCP20941 246 aa13.69□□□□□ -0.22
ZNF648-201ENST00000339948 CCDC144BQ3MJ40 725 aa13.69□□□□□ -0.22
ZNF648-201ENST00000339948 CCDC144CPQ8IYA2 1237 aa13.69□□□□□ -0.22
ZNF648-201ENST00000339948 ZNF215Q9UL58 517 aaPredicted RBP13.69□□□□□ -0.22
ZNF648-201ENST00000339948 TCHHQ07283 1943 aa13.69□□□□□ -0.22
ZNF648-201ENST00000339948 A0A0D9SFI3 127 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms