RNA–Protein interactions for RNA: ENST00000339497.7

CCNY-202, Transcript of cyclin Y, humanhuman

TSL 1 (best) BASIC

Gene CCNY, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-202ENST00000339497 CKAP2LQ8IYA6 745 aa18.82■□□□□ 0.6
CCNY-202ENST00000339497 NECAB1Q8N987 351 aa18.82■□□□□ 0.6
CCNY-202ENST00000339497 ZMYM4Q5VZL5 1548 aa18.82■□□□□ 0.6
CCNY-202ENST00000339497 KDM2BQ8NHM5 1336 aa18.82■□□□□ 0.6
CCNY-202ENST00000339497 HSP90AB3PQ58FF7 597 aa18.82■□□□□ 0.6
CCNY-202ENST00000339497 CCDC183Q5T5S1 534 aa18.82■□□□□ 0.6
CCNY-202ENST00000339497 C8orf76Q96K31 380 aa18.82■□□□□ 0.6
CCNY-202ENST00000339497 GPS2Q13227 327 aa18.82■□□□□ 0.6
CCNY-202ENST00000339497 OTUD7AQ8TE49 926 aaPredicted RBP18.82■□□□□ 0.6
CCNY-202ENST00000339497 ALDH1L1O75891 902 aa18.81■□□□□ 0.6
CCNY-202ENST00000339497 HMGN5P82970 282 aaKnown RBP18.81■□□□□ 0.6
CCNY-202ENST00000339497 MAP3K12Q12852 859 aa18.81■□□□□ 0.6
CCNY-202ENST00000339497 CDK5RAP3Q96JB5 506 aa18.81■□□□□ 0.6
CCNY-202ENST00000339497 ZNF652Q9Y2D9 606 aa18.81■□□□□ 0.6
CCNY-202ENST00000339497 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.81■□□□□ 0.63e-7■■■■□ 20.2
CCNY-202ENST00000339497 HMGB1P09429 215 aaKnown RBP18.81■□□□□ 0.6
CCNY-202ENST00000339497 AEBP2Q6ZN18 517 aaPredicted RBP18.81■□□□□ 0.6
CCNY-202ENST00000339497 LINS1Q8NG48 757 aa18.81■□□□□ 0.6
CCNY-202ENST00000339497 ZCRB1Q8TBF4 217 aaKnown RBP18.81■□□□□ 0.6
CCNY-202ENST00000339497 ZNF771Q7L3S4 317 aaPredicted RBP18.8■□□□□ 0.6
CCNY-202ENST00000339497 RAB11FIP4Q86YS3 637 aa18.8■□□□□ 0.6
CCNY-202ENST00000339497 NPHP3Q7Z494 1330 aa18.8■□□□□ 0.6
CCNY-202ENST00000339497 MAP3K5Q99683 1374 aa18.8■□□□□ 0.6
CCNY-202ENST00000339497 OFD1O75665 1012 aa18.8■□□□□ 0.6
CCNY-202ENST00000339497 NEK1Q96PY6 1258 aa18.8■□□□□ 0.6
CCNY-202ENST00000339497 BLMP54132 1417 aaPredicted RBP18.8■□□□□ 0.6
CCNY-202ENST00000339497 LRRC2Q9BYS8 371 aa18.79■□□□□ 0.6
CCNY-202ENST00000339497 USP25Q9UHP3 1055 aa18.79■□□□□ 0.6
CCNY-202ENST00000339497 GOLGA8BA8MQT2 603 aa18.79■□□□□ 0.6
CCNY-202ENST00000339497 NOL7Q9UMY1 257 aaKnown RBP18.79■□□□□ 0.6
CCNY-202ENST00000339497 KLHL40Q2TBA0 621 aa18.79■□□□□ 0.6
CCNY-202ENST00000339497 CAVIN4Q5BKX8 364 aa18.79■□□□□ 0.6
CCNY-202ENST00000339497 MAGI2Q86UL8 1455 aa18.78■□□□□ 0.6
CCNY-202ENST00000339497 RBM8AQ9Y5S9 174 aaKnown RBP18.78■□□□□ 0.6
CCNY-202ENST00000339497 CHL1O00533 1208 aa18.78■□□□□ 0.6
CCNY-202ENST00000339497 SNX21Q969T3 373 aa18.78■□□□□ 0.6
CCNY-202ENST00000339497 ARGLU1Q9NWB6 273 aaPredicted RBP18.78■□□□□ 0.6
CCNY-202ENST00000339497 TNNT3P45378 269 aaPredicted RBP18.78■□□□□ 0.6
CCNY-202ENST00000339497 IP6K1Q92551 441 aa18.78■□□□□ 0.6
CCNY-202ENST00000339497 BRF1Q92994 677 aa18.78■□□□□ 0.6
CCNY-202ENST00000339497 EDC4Q6P2E9 1401 aaKnown RBP18.78■□□□□ 0.6
CCNY-202ENST00000339497 FAM177A1Q8N128 213 aaPredicted RBP18.78■□□□□ 0.6
CCNY-202ENST00000339497 SLC5A1P13866 664 aa18.77■□□□□ 0.6
CCNY-202ENST00000339497 TEX13AQ9BXU3 409 aaPredicted RBP18.77■□□□□ 0.6
CCNY-202ENST00000339497 C19orf44Q9H6X5 657 aa18.77■□□□□ 0.6
CCNY-202ENST00000339497 MSH6P52701 1360 aa18.77■□□□□ 0.6
CCNY-202ENST00000339497 ZPR1O75312 459 aa18.77■□□□□ 0.6
CCNY-202ENST00000339497 EPS15P42566 896 aa18.77■□□□□ 0.6
CCNY-202ENST00000339497 SOGA3Q5TF21 947 aa18.77■□□□□ 0.59
CCNY-202ENST00000339497 WASF1Q92558 559 aa18.77■□□□□ 0.59
CCNY-202ENST00000339497 RANBP6O60518 1105 aaKnown RBP18.76■□□□□ 0.59
CCNY-202ENST00000339497 IFIT3O14879 490 aaKnown RBP18.76■□□□□ 0.59
CCNY-202ENST00000339497 ORAI2Q96SN7 254 aa18.76■□□□□ 0.59
CCNY-202ENST00000339497 MAGEC2Q9UBF1 373 aaPredicted RBP18.76■□□□□ 0.59
CCNY-202ENST00000339497 RBM5P52756 815 aaKnown RBP eCLIP18.75■□□□□ 0.59
CCNY-202ENST00000339497 USP16Q9Y5T5 823 aa18.75■□□□□ 0.59
CCNY-202ENST00000339497 ATP10AO60312 1499 aa18.75■□□□□ 0.59
CCNY-202ENST00000339497 ZGPATQ8N5A5 531 aaKnown RBP18.75■□□□□ 0.59
CCNY-202ENST00000339497 ARHGEF5Q12774 1597 aa18.75■□□□□ 0.59
CCNY-202ENST00000339497 SOS1Q07889 1333 aaPredicted RBP18.75■□□□□ 0.59
CCNY-202ENST00000339497 CCDC144CPQ8IYA2 1237 aa18.75■□□□□ 0.59
CCNY-202ENST00000339497 NGLY1Q96IV0 654 aa18.75■□□□□ 0.59
CCNY-202ENST00000339497 HSPA2P54652 639 aa18.75■□□□□ 0.59
CCNY-202ENST00000339497 KRT18P05783 430 aaKnown RBP18.74■□□□□ 0.59
CCNY-202ENST00000339497 ANAPC15P60006 121 aa18.74■□□□□ 0.59
CCNY-202ENST00000339497 ZSCAN29Q8IWY8 852 aaPredicted RBP18.74■□□□□ 0.59
CCNY-202ENST00000339497 LGR6Q9HBX8 967 aa18.74■□□□□ 0.59
CCNY-202ENST00000339497 SLC12A7Q9Y666 1083 aa18.74■□□□□ 0.59
CCNY-202ENST00000339497 CCDC112Q8NEF3 446 aa18.74■□□□□ 0.59
CCNY-202ENST00000339497 HMG20BQ9P0W2 317 aa18.74■□□□□ 0.59
CCNY-202ENST00000339497 TRPM2O94759 1503 aa18.74■□□□□ 0.59
CCNY-202ENST00000339497 RNMTO43148 476 aaKnown RBP18.73■□□□□ 0.59
CCNY-202ENST00000339497 PPFIBP1Q86W92 1011 aa18.73■□□□□ 0.59
CCNY-202ENST00000339497 MICU3Q86XE3 530 aa18.73■□□□□ 0.59
CCNY-202ENST00000339497 SMARCE1Q969G3 411 aa18.73■□□□□ 0.59
CCNY-202ENST00000339497 ZHX3Q9H4I2 956 aa18.73■□□□□ 0.59
CCNY-202ENST00000339497 DACH1Q9UI36 760 aa18.73■□□□□ 0.59
CCNY-202ENST00000339497 ABCA8O94911 1581 aa18.73■□□□□ 0.59
CCNY-202ENST00000339497 CHMLP26374 656 aa18.73■□□□□ 0.59
CCNY-202ENST00000339497 CFAP100Q494V2 611 aa18.73■□□□□ 0.59
CCNY-202ENST00000339497 CCAR1Q8IX12 1150 aaKnown RBP18.73■□□□□ 0.59
CCNY-202ENST00000339497 ANKIB1Q9P2G1 1089 aa18.73■□□□□ 0.59
CCNY-202ENST00000339497 POLR3DP05423 398 aaPredicted RBP18.73■□□□□ 0.59
CCNY-202ENST00000339497 USP5P45974 858 aa18.73■□□□□ 0.59
CCNY-202ENST00000339497 PANK2Q9BZ23 570 aa18.73■□□□□ 0.59
CCNY-202ENST00000339497 ORC3Q9UBD5 711 aaPredicted RBP18.73■□□□□ 0.59
CCNY-202ENST00000339497 ADGBQ8N7X0 1667 aa18.72■□□□□ 0.59
CCNY-202ENST00000339497 ZSCAN22P10073 491 aaPredicted RBP18.72■□□□□ 0.59
CCNY-202ENST00000339497 FSIP1Q8NA03 581 aa18.72■□□□□ 0.59
CCNY-202ENST00000339497 USP26Q9BXU7 913 aa18.72■□□□□ 0.59
CCNY-202ENST00000339497 UQCRHLA0A096LP55 91 aa18.72■□□□□ 0.59
CCNY-202ENST00000339497 GOLGA8AA7E2F4 631 aa18.72■□□□□ 0.59
CCNY-202ENST00000339497 UQCRHP07919 91 aa18.72■□□□□ 0.59
CCNY-202ENST00000339497 NMIQ13287 307 aaPredicted RBP18.72■□□□□ 0.59
CCNY-202ENST00000339497 ZSCAN23Q3MJ62 389 aa18.72■□□□□ 0.59
CCNY-202ENST00000339497 MKNK2Q9HBH9 465 aa18.72■□□□□ 0.59
CCNY-202ENST00000339497 SSBP05455 408 aaKnown RBP eCLIP18.72■□□□□ 0.59
CCNY-202ENST00000339497 PPP1R1BQ9UD71 204 aaPredicted RBP18.72■□□□□ 0.59
CCNY-202ENST00000339497 CCDC196A0A1B0GTZ2 297 aa18.71■□□□□ 0.59
CCNY-202ENST00000339497 DZIP1Q86YF9 867 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms