RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 ARHGAP31Q2M1Z3 1444 aa11□□□□□ -0.65
RPGR-202ENST00000339363 MYO1CO00159 1063 aa10.99□□□□□ -0.65
RPGR-202ENST00000339363 SLC4A2P04920 1241 aa10.99□□□□□ -0.65
RPGR-202ENST00000339363 SART3Q15020 963 aaKnown RBP10.99□□□□□ -0.65
RPGR-202ENST00000339363 ZSCAN26Q16670 478 aa10.99□□□□□ -0.65
RPGR-202ENST00000339363 HDGFL2Q7Z4V5 671 aaPredicted RBP10.99□□□□□ -0.65
RPGR-202ENST00000339363 FILIP1Q7Z7B0 1213 aa10.99□□□□□ -0.65
RPGR-202ENST00000339363 DDX54Q8TDD1 881 aaKnown RBP10.99□□□□□ -0.65
RPGR-202ENST00000339363 RIMS1Q86UR5 1692 aaKnown RBP10.99□□□□□ -0.65
RPGR-202ENST00000339363 GOLGA6L19H0YKK7 550 aa10.99□□□□□ -0.65
RPGR-202ENST00000339363 E2F4Q16254 413 aa10.99□□□□□ -0.65
RPGR-202ENST00000339363 TTLL5Q6EMB2 1281 aa10.99□□□□□ -0.65
RPGR-202ENST00000339363 FBXO38Q6PIJ6 1188 aa10.99□□□□□ -0.65
RPGR-202ENST00000339363 NRDCO43847 1150 aa10.99□□□□□ -0.65
RPGR-202ENST00000339363 PDE1AP54750 535 aa10.99□□□□□ -0.65
RPGR-202ENST00000339363 CAMK4Q16566 473 aa10.99□□□□□ -0.65
RPGR-202ENST00000339363 PUS7Q96PZ0 661 aaKnown RBP10.99□□□□□ -0.65
RPGR-202ENST00000339363 CDC42BPGQ6DT37 1551 aa10.98□□□□□ -0.65
RPGR-202ENST00000339363 MX1P20591 662 aa10.98□□□□□ -0.65
RPGR-202ENST00000339363 EIF4A2Q14240 407 aaKnown RBP10.98□□□□□ -0.65
RPGR-202ENST00000339363 KIF20BQ96Q89 1820 aa10.98□□□□□ -0.65
RPGR-202ENST00000339363 TDO2P48775 406 aa10.98□□□□□ -0.65
RPGR-202ENST00000339363 UBXN4Q92575 508 aa10.98□□□□□ -0.65
RPGR-202ENST00000339363 WDR33Q9C0J8 1336 aaKnown RBP10.98□□□□□ -0.65
RPGR-202ENST00000339363 PRR36Q9H6K5 1346 aa10.98□□□□□ -0.65
RPGR-202ENST00000339363 TMEM131LA2VDJ0 1609 aa10.98□□□□□ -0.65
RPGR-202ENST00000339363 ALKQ9UM73 1620 aa10.98□□□□□ -0.65
RPGR-202ENST00000339363 TULP2O00295 520 aa10.97□□□□□ -0.65
RPGR-202ENST00000339363 SLU7O95391 586 aaKnown RBP10.97□□□□□ -0.65
RPGR-202ENST00000339363 PRR29P0C7W0 189 aa10.97□□□□□ -0.65
RPGR-202ENST00000339363 CREBRFQ8IUR6 639 aa10.97□□□□□ -0.65
RPGR-202ENST00000339363 CNPY2Q9Y2B0 182 aa10.97□□□□□ -0.65
RPGR-202ENST00000339363 JRKLQ9Y4A0 524 aa10.97□□□□□ -0.65
RPGR-202ENST00000339363 A0A1B0GUL7 405 aa10.97□□□□□ -0.65
RPGR-202ENST00000339363 CYP2C19P33261 490 aa10.97□□□□□ -0.65
RPGR-202ENST00000339363 IL1RAPL2Q9NP60 686 aa10.97□□□□□ -0.65
RPGR-202ENST00000339363 ANO2Q9NQ90 1003 aa10.97□□□□□ -0.65
RPGR-202ENST00000339363 METP08581 1390 aa10.97□□□□□ -0.65
RPGR-202ENST00000339363 CHRM1P11229 460 aaPredicted RBP10.97□□□□□ -0.65
RPGR-202ENST00000339363 KCNF1Q9H3M0 494 aa10.97□□□□□ -0.65
RPGR-202ENST00000339363 CLIP2Q9UDT6 1046 aa10.97□□□□□ -0.65
RPGR-202ENST00000339363 ATP6V1DQ9Y5K8 247 aa10.97□□□□□ -0.65
RPGR-202ENST00000339363 TSPOAP1O95153 1857 aa10.97□□□□□ -0.65
RPGR-202ENST00000339363 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.96□□□□□ -0.65
RPGR-202ENST00000339363 ZNF526Q8TF50 670 aaPredicted RBP10.96□□□□□ -0.65
RPGR-202ENST00000339363 NCAPGQ9BPX3 1015 aa10.96□□□□□ -0.65
RPGR-202ENST00000339363 YY1AP1Q9H869 796 aa10.96□□□□□ -0.65
RPGR-202ENST00000339363 RNF216Q9NWF9 866 aaPredicted RBP10.96□□□□□ -0.65
RPGR-202ENST00000339363 SALL3Q9BXA9 1300 aa10.96□□□□□ -0.65
RPGR-202ENST00000339363 VPS37CA5D8V6 355 aaPredicted RBP10.96□□□□□ -0.65
RPGR-202ENST00000339363 BECN2A8MW95 431 aa10.96□□□□□ -0.65
RPGR-202ENST00000339363 LARGE1O95461 756 aa10.96□□□□□ -0.66
RPGR-202ENST00000339363 SYCP1Q15431 976 aa10.96□□□□□ -0.66
RPGR-202ENST00000339363 ARHGAP29Q52LW3 1261 aa10.96□□□□□ -0.66
RPGR-202ENST00000339363 CKAP2LQ8IYA6 745 aa10.96□□□□□ -0.66
RPGR-202ENST00000339363 ERO1AQ96HE7 468 aa10.96□□□□□ -0.66
RPGR-202ENST00000339363 CCDC34Q96HJ3 373 aa10.96□□□□□ -0.66
RPGR-202ENST00000339363 SLC52A1Q9NWF4 448 aa10.96□□□□□ -0.66
RPGR-202ENST00000339363 BCCIPQ9P287 314 aaKnown RBP eCLIP10.96□□□□□ -0.66
RPGR-202ENST00000339363 CHL1O00533 1208 aa10.95□□□□□ -0.66
RPGR-202ENST00000339363 BRD1O95696 1058 aa10.95□□□□□ -0.66
RPGR-202ENST00000339363 ERCC6LQ2NKX8 1250 aa10.95□□□□□ -0.66
RPGR-202ENST00000339363 RNF20Q5VTR2 975 aa10.95□□□□□ -0.66
RPGR-202ENST00000339363 LUZP1Q86V48 1076 aa10.95□□□□□ -0.66
RPGR-202ENST00000339363 RILPL2Q969X0 211 aa10.95□□□□□ -0.66
RPGR-202ENST00000339363 MLH3Q9UHC1 1453 aa10.95□□□□□ -0.66
RPGR-202ENST00000339363 NUTM1Q86Y26 1132 aa10.95□□□□□ -0.66
RPGR-202ENST00000339363 RASEFQ8IZ41 740 aa10.95□□□□□ -0.66
RPGR-202ENST00000339363 FBXW7Q969H0 707 aa10.95□□□□□ -0.66
RPGR-202ENST00000339363 API5Q9BZZ5 524 aaKnown RBP10.95□□□□□ -0.66
RPGR-202ENST00000339363 NRBP1Q9UHY1 535 aa10.95□□□□□ -0.66
RPGR-202ENST00000339363 CLTCQ00610 1675 aaKnown RBP10.94□□□□□ -0.66
RPGR-202ENST00000339363 ERC2O15083 957 aa10.94□□□□□ -0.66
RPGR-202ENST00000339363 FAM69CQ0P6D2 419 aa10.94□□□□□ -0.66
RPGR-202ENST00000339363 SYTL4Q96C24 671 aaPredicted RBP10.94□□□□□ -0.66
RPGR-202ENST00000339363 CPSF1Q10570 1443 aaKnown RBP10.94□□□□□ -0.66
RPGR-202ENST00000339363 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.94□□□□□ -0.66
RPGR-202ENST00000339363 NEO1Q92859 1461 aa10.94□□□□□ -0.66
RPGR-202ENST00000339363 MCM2P49736 904 aa10.94□□□□□ -0.66
RPGR-202ENST00000339363 MNAT1P51948 309 aa10.94□□□□□ -0.66
RPGR-202ENST00000339363 ZRSR1Q15695 479 aaKnown RBP10.94□□□□□ -0.66
RPGR-202ENST00000339363 CCDC91Q7Z6B0 441 aa10.94□□□□□ -0.66
RPGR-202ENST00000339363 ESYT1Q9BSJ8 1104 aa10.94□□□□□ -0.66
RPGR-202ENST00000339363 RRP15Q9Y3B9 282 aaKnown RBP10.94□□□□□ -0.66
RPGR-202ENST00000339363 DIP2CQ9Y2E4 1556 aa10.93□□□□□ -0.66
RPGR-202ENST00000339363 ZFYVE9O95405 1425 aa10.93□□□□□ -0.66
RPGR-202ENST00000339363 NUDT16Q96DE0 195 aaKnown RBP10.93□□□□□ -0.66
RPGR-202ENST00000339363 RPAP1Q9BWH6 1393 aaPredicted RBP10.93□□□□□ -0.66
RPGR-202ENST00000339363 ADAMTSL3P82987 1691 aa10.93□□□□□ -0.66
RPGR-202ENST00000339363 UBE2HP62256 183 aa10.93□□□□□ -0.66
RPGR-202ENST00000339363 SMC3Q9UQE7 1217 aa10.93□□□□□ -0.66
RPGR-202ENST00000339363 SKILP12757 684 aa10.93□□□□□ -0.66
RPGR-202ENST00000339363 CHMLP26374 656 aa10.93□□□□□ -0.66
RPGR-202ENST00000339363 MAP3K11Q16584 847 aa10.93□□□□□ -0.66
RPGR-202ENST00000339363 MTHFSDQ2M296 383 aaKnown RBP10.93□□□□□ -0.66
RPGR-202ENST00000339363 SRCIN1Q9C0H9 1055 aa10.93□□□□□ -0.66
RPGR-202ENST00000339363 KCNG1Q9UIX4 513 aa10.93□□□□□ -0.66
RPGR-202ENST00000339363 SETQ01105 290 aaPredicted RBP10.92□□□□□ -0.66
RPGR-202ENST00000339363 FAM173BQ6P4H8 233 aa10.92□□□□□ -0.66
RPGR-202ENST00000339363 NUP62CLQ9H1M0 184 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms