RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 IBTKQ9P2D0 1353 aaPredicted RBP18.39■□□□□ 0.53
NIPAL3-202ENST00000339255 AFDNP55196 1824 aaKnown RBP18.38■□□□□ 0.53
NIPAL3-202ENST00000339255 SLC4A10Q6U841 1118 aa18.38■□□□□ 0.53
NIPAL3-202ENST00000339255 MAP3K2Q9Y2U5 619 aa18.38■□□□□ 0.53
NIPAL3-202ENST00000339255 ANKRD36CQ5JPF3 1778 aa18.38■□□□□ 0.53
NIPAL3-202ENST00000339255 EIF5P55010 431 aaKnown RBP18.38■□□□□ 0.53
NIPAL3-202ENST00000339255 KIF6Q6ZMV9 814 aa18.38■□□□□ 0.53
NIPAL3-202ENST00000339255 RIC3Q7Z5B4 369 aa18.38■□□□□ 0.53
NIPAL3-202ENST00000339255 UBR3Q6ZT12 1888 aa18.37■□□□□ 0.53
NIPAL3-202ENST00000339255 NUP98P52948 1817 aa18.37■□□□□ 0.53
NIPAL3-202ENST00000339255 NEXNQ0ZGT2 675 aa18.37■□□□□ 0.53
NIPAL3-202ENST00000339255 BCORQ6W2J9 1755 aa18.37■□□□□ 0.53
NIPAL3-202ENST00000339255 TXNRD1Q16881 649 aa18.36■□□□□ 0.53
NIPAL3-202ENST00000339255 ZNF330Q9Y3S2 320 aaPredicted RBP18.36■□□□□ 0.53
NIPAL3-202ENST00000339255 COL15A1P39059 1388 aa18.36■□□□□ 0.53
NIPAL3-202ENST00000339255 SF3B2Q13435 895 aaKnown RBP18.35■□□□□ 0.53
NIPAL3-202ENST00000339255 LINS1Q8NG48 757 aa18.35■□□□□ 0.53
NIPAL3-202ENST00000339255 SRCIN1Q9C0H9 1055 aa18.35■□□□□ 0.53
NIPAL3-202ENST00000339255 LRRC4BQ9NT99 713 aa18.35■□□□□ 0.53
NIPAL3-202ENST00000339255 A0A087WZG4 1122 aa18.34■□□□□ 0.53
NIPAL3-202ENST00000339255 ALDH1L1O75891 902 aa18.34■□□□□ 0.53
NIPAL3-202ENST00000339255 KCNQ4P56696 695 aa18.34■□□□□ 0.53
NIPAL3-202ENST00000339255 TTLL7Q6ZT98 887 aa18.34■□□□□ 0.53
NIPAL3-202ENST00000339255 CCDC125Q86Z20 511 aa18.34■□□□□ 0.53
NIPAL3-202ENST00000339255 METTL22Q9BUU2 404 aaPredicted RBP18.34■□□□□ 0.53
NIPAL3-202ENST00000339255 PPP4R2Q9NY27 417 aa18.34■□□□□ 0.53
NIPAL3-202ENST00000339255 SCN7AQ01118 1682 aa18.34■□□□□ 0.53
NIPAL3-202ENST00000339255 MAP3K15Q6ZN16 1313 aa18.34■□□□□ 0.53
NIPAL3-202ENST00000339255 RPS6KA4O75676 772 aa18.34■□□□□ 0.53
NIPAL3-202ENST00000339255 BEND3Q5T5X7 828 aa18.34■□□□□ 0.53
NIPAL3-202ENST00000339255 C4AP0C0L4 1744 aa18.34■□□□□ 0.53
NIPAL3-202ENST00000339255 ERVV-1B6SEH8 477 aa18.33■□□□□ 0.52
NIPAL3-202ENST00000339255 RGL2O15211 777 aa18.33■□□□□ 0.52
NIPAL3-202ENST00000339255 AK7Q96M32 723 aa18.33■□□□□ 0.52
NIPAL3-202ENST00000339255 ZBTB7BO15156 539 aaPredicted RBP18.32■□□□□ 0.52
NIPAL3-202ENST00000339255 GNPATO15228 680 aa18.32■□□□□ 0.52
NIPAL3-202ENST00000339255 ADRA2BP18089 450 aa18.32■□□□□ 0.52
NIPAL3-202ENST00000339255 DZIP3Q86Y13 1208 aaKnown RBP18.32■□□□□ 0.52
NIPAL3-202ENST00000339255 ZBTB40Q9NUA8 1239 aa18.32■□□□□ 0.52
NIPAL3-202ENST00000339255 RTCBQ9Y3I0 505 aaKnown RBP18.32■□□□□ 0.52
NIPAL3-202ENST00000339255 BAG6P46379 1132 aa18.31■□□□□ 0.52
NIPAL3-202ENST00000339255 ZBTB3Q9H5J0 574 aa18.31■□□□□ 0.52
NIPAL3-202ENST00000339255 GNAI3P08754 354 aa18.31■□□□□ 0.52
NIPAL3-202ENST00000339255 HSP90AB3PQ58FF7 597 aa18.31■□□□□ 0.52
NIPAL3-202ENST00000339255 PROM2Q8N271 834 aa18.31■□□□□ 0.52
NIPAL3-202ENST00000339255 GIGYF2Q6Y7W6 1299 aaKnown RBP18.3■□□□□ 0.52
NIPAL3-202ENST00000339255 ARXQ96QS3 562 aa18.3■□□□□ 0.52
NIPAL3-202ENST00000339255 MYD88Q99836 296 aa18.29■□□□□ 0.52
NIPAL3-202ENST00000339255 HDAC5Q9UQL6 1122 aa18.29■□□□□ 0.52
NIPAL3-202ENST00000339255 ZNF652Q9Y2D9 606 aa18.29■□□□□ 0.52
NIPAL3-202ENST00000339255 CAMKK2Q96RR4 588 aa18.28■□□□□ 0.52
NIPAL3-202ENST00000339255 QSER1Q2KHR3 1735 aa18.28■□□□□ 0.52
NIPAL3-202ENST00000339255 TUBGCP6Q96RT7 1819 aa18.28■□□□□ 0.52
NIPAL3-202ENST00000339255 NEURL1BA8MQ27 555 aa18.28■□□□□ 0.52
NIPAL3-202ENST00000339255 IGKV5-2P06315 115 aa18.28■□□□□ 0.52
NIPAL3-202ENST00000339255 SSFA2P28290 1259 aa18.28■□□□□ 0.52
NIPAL3-202ENST00000339255 TRIM28Q13263 835 aaKnown RBP18.28■□□□□ 0.52
NIPAL3-202ENST00000339255 TCIRG1Q13488 830 aa18.28■□□□□ 0.52
NIPAL3-202ENST00000339255 CCDC191Q8NCU4 936 aa18.28■□□□□ 0.52
NIPAL3-202ENST00000339255 TBC1D2BQ9UPU7 963 aa18.28■□□□□ 0.52
NIPAL3-202ENST00000339255 CAMTA2O94983 1202 aa18.27■□□□□ 0.52
NIPAL3-202ENST00000339255 CLEC4GQ6UXB4 293 aa18.27■□□□□ 0.52
NIPAL3-202ENST00000339255 CCDC136Q96JN2 1154 aa18.27■□□□□ 0.52
NIPAL3-202ENST00000339255 MEIS3Q99687 375 aa18.27■□□□□ 0.52
NIPAL3-202ENST00000339255 USP44Q9H0E7 712 aa18.27■□□□□ 0.52
NIPAL3-202ENST00000339255 UBTFL1P0CB47 393 aaPredicted RBP18.26■□□□□ 0.51
NIPAL3-202ENST00000339255 GCKRQ14397 625 aa18.26■□□□□ 0.51
NIPAL3-202ENST00000339255 CWF19L2Q2TBE0 894 aaKnown RBP18.26■□□□□ 0.51
NIPAL3-202ENST00000339255 C9orf78Q9NZ63 289 aaPredicted RBP18.26■□□□□ 0.51
NIPAL3-202ENST00000339255 UTYO14607 1347 aa18.26■□□□□ 0.51
NIPAL3-202ENST00000339255 GRM8O00222 908 aa18.25■□□□□ 0.51
NIPAL3-202ENST00000339255 TRAPPC3LQ5T215 181 aa18.25■□□□□ 0.51
NIPAL3-202ENST00000339255 ISCA1Q9BUE6 129 aa18.25■□□□□ 0.51
NIPAL3-202ENST00000339255 CWC25Q9NXE8 425 aaPredicted RBP18.25■□□□□ 0.51
NIPAL3-202ENST00000339255 NARFQ9UHQ1 456 aa18.25■□□□□ 0.51
NIPAL3-202ENST00000339255 ZPR1O75312 459 aa18.25■□□□□ 0.51
NIPAL3-202ENST00000339255 EN1Q05925 392 aaPredicted RBP18.25■□□□□ 0.51
NIPAL3-202ENST00000339255 ATP5J2-PTCD1G3V325 749 aa18.24■□□□□ 0.51
NIPAL3-202ENST00000339255 GNAI2P04899 355 aa18.24■□□□□ 0.51
NIPAL3-202ENST00000339255 RFC4P35249 363 aa18.24■□□□□ 0.51
NIPAL3-202ENST00000339255 FLAD1Q8NFF5 587 aa18.24■□□□□ 0.51
NIPAL3-202ENST00000339255 AKT1S1Q96B36 256 aa18.24■□□□□ 0.51
NIPAL3-202ENST00000339255 HLFQ16534 295 aa18.23■□□□□ 0.51
NIPAL3-202ENST00000339255 ARHGEF1Q92888 912 aaKnown RBP18.23■□□□□ 0.51
NIPAL3-202ENST00000339255 TFCP2L1Q9NZI6 479 aa18.23■□□□□ 0.51
NIPAL3-202ENST00000339255 USP42Q9H9J4 1324 aaKnown RBP18.22■□□□□ 0.51
NIPAL3-202ENST00000339255 COL24A1Q17RW2 1714 aa18.22■□□□□ 0.51
NIPAL3-202ENST00000339255 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.22■□□□□ 0.51
NIPAL3-202ENST00000339255 EZH2Q15910 746 aaKnown RBP18.22■□□□□ 0.51
NIPAL3-202ENST00000339255 MYH3P11055 1940 aa18.22■□□□□ 0.51
NIPAL3-202ENST00000339255 PARP10Q53GL7 1025 aa18.22■□□□□ 0.51
NIPAL3-202ENST00000339255 ZNF34Q8IZ26 560 aa18.22■□□□□ 0.51
NIPAL3-202ENST00000339255 PCDHB15Q9Y5E8 787 aa18.22■□□□□ 0.51
NIPAL3-202ENST00000339255 PHF14O94880 888 aa18.21■□□□□ 0.51
NIPAL3-202ENST00000339255 NBPF7P0C2Y1 421 aaPredicted RBP18.21■□□□□ 0.51
NIPAL3-202ENST00000339255 AMIGO3Q86WK7 504 aa18.21■□□□□ 0.51
NIPAL3-202ENST00000339255 RPAP2Q8IXW5 612 aaPredicted RBP18.21■□□□□ 0.51
NIPAL3-202ENST00000339255 HDAC1Q13547 482 aaPredicted RBP18.2■□□□□ 0.5
NIPAL3-202ENST00000339255 ZNF827Q17R98 1081 aa18.2■□□□□ 0.5
NIPAL3-202ENST00000339255 NLRP10Q86W26 655 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms