RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 CAPN15O75808 1086 aa20.92■□□□□ 0.94
LINC01116-202ENST00000339037 CAMTA2O94983 1202 aa20.92■□□□□ 0.94
LINC01116-202ENST00000339037 CCDC24Q8N4L8 307 aa20.92■□□□□ 0.94
LINC01116-202ENST00000339037 SETDB2Q96T68 719 aa20.92■□□□□ 0.94
LINC01116-202ENST00000339037 TIAM2Q8IVF5 1701 aa20.92■□□□□ 0.94
LINC01116-202ENST00000339037 KCNQ3O43525 872 aa20.91■□□□□ 0.94
LINC01116-202ENST00000339037 C21orf2O43822 256 aa20.91■□□□□ 0.94
LINC01116-202ENST00000339037 ANKRD31Q8N7Z5 1873 aa20.91■□□□□ 0.94
LINC01116-202ENST00000339037 NUDCQ9Y266 331 aa20.91■□□□□ 0.94
LINC01116-202ENST00000339037 DZIP3Q86Y13 1208 aaKnown RBP20.9■□□□□ 0.94
LINC01116-202ENST00000339037 ST5P78524 1137 aa20.89■□□□□ 0.93
LINC01116-202ENST00000339037 JMYQ8N9B5 988 aa20.89■□□□□ 0.93
LINC01116-202ENST00000339037 COL11A2P13942 1736 aaPredicted RBP20.89■□□□□ 0.93
LINC01116-202ENST00000339037 U2AF1L5P0DN76 240 aaPredicted RBP20.88■□□□□ 0.93
LINC01116-202ENST00000339037 U2AF1Q01081 240 aaKnown RBP eCLIP20.88■□□□□ 0.93
LINC01116-202ENST00000339037 DPY19L2Q6NUT2 758 aa20.88■□□□□ 0.93
LINC01116-202ENST00000339037 RTF1Q92541 710 aaKnown RBP20.88■□□□□ 0.93
LINC01116-202ENST00000339037 ERFEQ4G0M1 354 aa20.87■□□□□ 0.93
LINC01116-202ENST00000339037 CNKSR1Q969H4 720 aa20.87■□□□□ 0.93
LINC01116-202ENST00000339037 TAOK3Q9H2K8 898 aa20.87■□□□□ 0.93
LINC01116-202ENST00000339037 USP16Q9Y5T5 823 aa20.87■□□□□ 0.93
LINC01116-202ENST00000339037 PIP4K2AP48426 406 aaPredicted RBP20.86■□□□□ 0.93
LINC01116-202ENST00000339037 STYK1Q6J9G0 422 aa20.86■□□□□ 0.93
LINC01116-202ENST00000339037 MCM10Q7L590 875 aa20.86■□□□□ 0.93
LINC01116-202ENST00000339037 BCORQ6W2J9 1755 aa20.85■□□□□ 0.93
LINC01116-202ENST00000339037 LTBP3Q9NS15 1303 aa20.85■□□□□ 0.93
LINC01116-202ENST00000339037 PRAMEF22A3QJZ6 481 aa20.85■□□□□ 0.93
LINC01116-202ENST00000339037 SNRPA1P09661 255 aaKnown RBP20.85■□□□□ 0.93
LINC01116-202ENST00000339037 SRGNP10124 158 aa20.85■□□□□ 0.93
LINC01116-202ENST00000339037 PRPF40BQ6NWY9 871 aaKnown RBP20.85■□□□□ 0.93
LINC01116-202ENST00000339037 ZNF652Q9Y2D9 606 aa20.85■□□□□ 0.93
LINC01116-202ENST00000339037 CCDC88AQ3V6T2 1871 aa20.84■□□□□ 0.93
LINC01116-202ENST00000339037 PPP2R1AP30153 589 aa20.84■□□□□ 0.93
LINC01116-202ENST00000339037 SOGA3Q5TF21 947 aa20.84■□□□□ 0.93
LINC01116-202ENST00000339037 CLEC4GQ6UXB4 293 aa20.84■□□□□ 0.93
LINC01116-202ENST00000339037 NBPF5PQ86XG9 351 aaPredicted RBP20.84■□□□□ 0.93
LINC01116-202ENST00000339037 MASTLQ96GX5 879 aa20.84■□□□□ 0.93
LINC01116-202ENST00000339037 FER1L6Q2WGJ9 1857 aa20.84■□□□□ 0.93
LINC01116-202ENST00000339037 POTECB2RU33 542 aa20.83■□□□□ 0.93
LINC01116-202ENST00000339037 DCTN1Q14203 1278 aa20.81■□□□□ 0.92
LINC01116-202ENST00000339037 SLX4Q8IY92 1834 aa20.81■□□□□ 0.92
LINC01116-202ENST00000339037 HTATSF1O43719 755 aaKnown RBP20.8■□□□□ 0.92
LINC01116-202ENST00000339037 DICER1Q9UPY3 1922 aaKnown RBP20.79■□□□□ 0.92
LINC01116-202ENST00000339037 NBPF26B4DH59 902 aa20.79■□□□□ 0.92
LINC01116-202ENST00000339037 NBPF10Q6P3W6 841 aaKnown RBP20.79■□□□□ 0.92
LINC01116-202ENST00000339037 NBPF15Q8N660 670 aa20.79■□□□□ 0.92
LINC01116-202ENST00000339037 RGL2O15211 777 aa20.78■□□□□ 0.92
LINC01116-202ENST00000339037 NPR1P16066 1061 aa20.78■□□□□ 0.92
LINC01116-202ENST00000339037 MKRN4PQ13434 485 aaPredicted RBP20.78■□□□□ 0.92
LINC01116-202ENST00000339037 COL13A1Q5TAT6 717 aaPredicted RBP20.78■□□□□ 0.92
LINC01116-202ENST00000339037 TPTE2Q6XPS3 522 aa20.78■□□□□ 0.92
LINC01116-202ENST00000339037 NIP7Q9Y221 180 aaKnown RBP eCLIP20.78■□□□□ 0.92
LINC01116-202ENST00000339037 DDNO94850 711 aaPredicted RBP20.77■□□□□ 0.92
LINC01116-202ENST00000339037 POLA2Q14181 598 aa20.77■□□□□ 0.92
LINC01116-202ENST00000339037 TAF7Q15545 349 aaPredicted RBP20.77■□□□□ 0.92
LINC01116-202ENST00000339037 CCDC93Q567U6 631 aa20.77■□□□□ 0.92
LINC01116-202ENST00000339037 ARFGEF2Q9Y6D5 1785 aa20.77■□□□□ 0.91
LINC01116-202ENST00000339037 CACNA1SQ13698 1873 aa20.76■□□□□ 0.91
LINC01116-202ENST00000339037 KLRG2A4D1S0 409 aaPredicted RBP20.76■□□□□ 0.91
LINC01116-202ENST00000339037 C7orf43Q8WVR3 580 aa20.76■□□□□ 0.91
LINC01116-202ENST00000339037 CHADLQ6NUI6 762 aa20.75■□□□□ 0.91
LINC01116-202ENST00000339037 IQCA1LA6NCM1 817 aa20.74■□□□□ 0.91
LINC01116-202ENST00000339037 FAM177BA6PVY3 158 aa20.74■□□□□ 0.91
LINC01116-202ENST00000339037 NEFMP07197 916 aa20.74■□□□□ 0.91
LINC01116-202ENST00000339037 MIS18AQ9NYP9 233 aa20.74■□□□□ 0.91
LINC01116-202ENST00000339037 POTEIP0CG38 1075 aa20.73■□□□□ 0.91
LINC01116-202ENST00000339037 POTEJP0CG39 1038 aa20.73■□□□□ 0.91
LINC01116-202ENST00000339037 FKBP4Q02790 459 aaKnown RBP eCLIP20.73■□□□□ 0.91
LINC01116-202ENST00000339037 HSPA1AP0DMV8 641 aaKnown RBP20.72■□□□□ 0.91
LINC01116-202ENST00000339037 HSPA1BP0DMV9 641 aaKnown RBP20.72■□□□□ 0.91
LINC01116-202ENST00000339037 GTF2E1P29083 439 aaPredicted RBP20.72■□□□□ 0.91
LINC01116-202ENST00000339037 HLFQ16534 295 aa20.72■□□□□ 0.91
LINC01116-202ENST00000339037 L3MBTL3Q96JM7 780 aaPredicted RBP20.72■□□□□ 0.91
LINC01116-202ENST00000339037 OLFM4Q6UX06 510 aa20.71■□□□□ 0.91
LINC01116-202ENST00000339037 RTKN2Q8IZC4 609 aa20.71■□□□□ 0.91
LINC01116-202ENST00000339037 PNISRQ8TF01 805 aaKnown RBP20.71■□□□□ 0.91
LINC01116-202ENST00000339037 ZNF277Q9NRM2 450 aaPredicted RBP20.71■□□□□ 0.91
LINC01116-202ENST00000339037 CREBZFQ9NS37 354 aa20.71■□□□□ 0.91
LINC01116-202ENST00000339037 LAMB4A4D0S4 1761 aa20.7■□□□□ 0.9
LINC01116-202ENST00000339037 ALDH1B1P30837 517 aa20.7■□□□□ 0.9
LINC01116-202ENST00000339037 TNS4Q8IZW8 715 aa20.7■□□□□ 0.9
LINC01116-202ENST00000339037 LDHDQ86WU2 507 aa20.69■□□□□ 0.9
LINC01116-202ENST00000339037 NGEFQ8N5V2 710 aa20.69■□□□□ 0.9
LINC01116-202ENST00000339037 NYXQ9GZU5 481 aa20.69■□□□□ 0.9
LINC01116-202ENST00000339037 TAF1DQ9H5J8 278 aaPredicted RBP20.69■□□□□ 0.9
LINC01116-202ENST00000339037 ERVV-1B6SEH8 477 aa20.68■□□□□ 0.9
LINC01116-202ENST00000339037 ZNF541Q9H0D2 1346 aa20.68■□□□□ 0.9
LINC01116-202ENST00000339037 ABCC12Q96J65 1359 aa20.68■□□□□ 0.9
LINC01116-202ENST00000339037 CRY2Q49AN0 593 aa20.67■□□□□ 0.9
LINC01116-202ENST00000339037 KIF6Q6ZMV9 814 aa20.67■□□□□ 0.9
LINC01116-202ENST00000339037 MKRN1Q9UHC7 482 aaKnown RBP20.67■□□□□ 0.9
LINC01116-202ENST00000339037 MAP3K15Q6ZN16 1313 aa20.67■□□□□ 0.9
LINC01116-202ENST00000339037 EIF4A1P60842 406 aaKnown RBP20.66■□□□□ 0.9
LINC01116-202ENST00000339037 NFE2L2Q16236 605 aa20.66■□□□□ 0.9
LINC01116-202ENST00000339037 NUTM1Q86Y26 1132 aa20.66■□□□□ 0.9
LINC01116-202ENST00000339037 PLEKHF1Q96S99 279 aa20.66■□□□□ 0.9
LINC01116-202ENST00000339037 RRP7AQ9Y3A4 280 aaKnown RBP20.66■□□□□ 0.9
LINC01116-202ENST00000339037 KDM3BQ7LBC6 1761 aa20.66■□□□□ 0.9
LINC01116-202ENST00000339037 SCN4AP35499 1836 aa20.66■□□□□ 0.9
LINC01116-202ENST00000339037 DLG5Q8TDM6 1919 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms