RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 NECTIN2Q92692 538 aa24.24■■□□□ 1.47
RUNX3-202ENST00000338888 CBX8Q9HC52 389 aa24.24■■□□□ 1.47
RUNX3-202ENST00000338888 STK31Q9BXU1 1019 aa24.24■■□□□ 1.47
RUNX3-202ENST00000338888 CRB1P82279 1406 aa24.23■■□□□ 1.47
RUNX3-202ENST00000338888 FOXO3O43524 673 aa24.23■■□□□ 1.47
RUNX3-202ENST00000338888 GTF2E1P29083 439 aaPredicted RBP24.23■■□□□ 1.47
RUNX3-202ENST00000338888 ANO6Q4KMQ2 910 aa24.23■■□□□ 1.47
RUNX3-202ENST00000338888 FAM173BQ6P4H8 233 aa24.23■■□□□ 1.47
RUNX3-202ENST00000338888 AOX1Q06278 1338 aa24.23■■□□□ 1.47
RUNX3-202ENST00000338888 SLFN14P0C7P3 912 aa24.23■■□□□ 1.47
RUNX3-202ENST00000338888 ZNF592Q92610 1267 aa24.23■■□□□ 1.47
RUNX3-202ENST00000338888 TPD52L1Q16890 204 aaPredicted RBP24.22■■□□□ 1.47
RUNX3-202ENST00000338888 FERMT3Q86UX7 667 aa24.22■■□□□ 1.47
RUNX3-202ENST00000338888 FLIIQ13045 1269 aa24.22■■□□□ 1.47
RUNX3-202ENST00000338888 PAXBP1Q9Y5B6 917 aa24.22■■□□□ 1.47
RUNX3-202ENST00000338888 ADAMTS13Q76LX8 1427 aa24.22■■□□□ 1.47
RUNX3-202ENST00000338888 NUTM2FA1L443 756 aa24.21■■□□□ 1.47
RUNX3-202ENST00000338888 PI4K2BQ8TCG2 481 aa24.21■■□□□ 1.47
RUNX3-202ENST00000338888 DDX54Q8TDD1 881 aaKnown RBP24.21■■□□□ 1.47
RUNX3-202ENST00000338888 ZNF75DP51815 510 aa24.21■■□□□ 1.47
RUNX3-202ENST00000338888 NECAB1Q8N987 351 aa24.21■■□□□ 1.47
RUNX3-202ENST00000338888 PDRG1Q9NUG6 133 aa24.21■■□□□ 1.47
RUNX3-202ENST00000338888 MORC2Q9Y6X9 1032 aaPredicted RBP24.21■■□□□ 1.47
RUNX3-202ENST00000338888 CPS1P31327 1500 aa24.21■■□□□ 1.47
RUNX3-202ENST00000338888 KIF18AQ8NI77 898 aa24.2■■□□□ 1.47
RUNX3-202ENST00000338888 TNMDQ9H2S6 317 aa24.2■■□□□ 1.47
RUNX3-202ENST00000338888 ROBO2Q9HCK4 1378 aa24.2■■□□□ 1.46
RUNX3-202ENST00000338888 ZBTB22O15209 634 aa24.2■■□□□ 1.46
RUNX3-202ENST00000338888 SURF6O75683 361 aaKnown RBP24.2■■□□□ 1.46
RUNX3-202ENST00000338888 ADCK5Q3MIX3 580 aa24.2■■□□□ 1.46
RUNX3-202ENST00000338888 JAKMIP1Q96N16 626 aaKnown RBP24.2■■□□□ 1.46
RUNX3-202ENST00000338888 TMEM51Q9NW97 253 aa24.2■■□□□ 1.46
RUNX3-202ENST00000338888 DACT1Q9NYF0 836 aa24.2■■□□□ 1.46
RUNX3-202ENST00000338888 CACTINQ8WUQ7 758 aaKnown RBP24.19■■□□□ 1.46
RUNX3-202ENST00000338888 KRT85P78386 507 aa24.19■■□□□ 1.46
RUNX3-202ENST00000338888 ST3GAL1Q11201 340 aa24.19■■□□□ 1.46
RUNX3-202ENST00000338888 PLEKHG1Q9ULL1 1385 aa24.19■■□□□ 1.46
RUNX3-202ENST00000338888 PLA2G4DQ86XP0 818 aa24.18■■□□□ 1.46
RUNX3-202ENST00000338888 THEMISQ8N1K5 641 aaPredicted RBP24.18■■□□□ 1.46
RUNX3-202ENST00000338888 SOS1Q07889 1333 aaPredicted RBP24.18■■□□□ 1.46
RUNX3-202ENST00000338888 LARP1BQ659C4 914 aaKnown RBP24.18■■□□□ 1.46
RUNX3-202ENST00000338888 CNTROBQ8N137 903 aa24.18■■□□□ 1.46
RUNX3-202ENST00000338888 NUDT16Q96DE0 195 aaKnown RBP24.18■■□□□ 1.46
RUNX3-202ENST00000338888 HSP90AB2PQ58FF8 381 aa24.17■■□□□ 1.46
RUNX3-202ENST00000338888 ME3Q16798 604 aa24.17■■□□□ 1.46
RUNX3-202ENST00000338888 CEP135Q66GS9 1140 aa24.17■■□□□ 1.46
RUNX3-202ENST00000338888 USP44Q9H0E7 712 aa24.17■■□□□ 1.46
RUNX3-202ENST00000338888 CLIP2Q9UDT6 1046 aa24.17■■□□□ 1.46
RUNX3-202ENST00000338888 UBTFL1P0CB47 393 aaPredicted RBP24.16■■□□□ 1.46
RUNX3-202ENST00000338888 CCDC144BQ3MJ40 725 aa24.16■■□□□ 1.46
RUNX3-202ENST00000338888 PRPF40BQ6NWY9 871 aaKnown RBP24.16■■□□□ 1.46
RUNX3-202ENST00000338888 CDC37L1Q7L3B6 337 aa24.16■■□□□ 1.46
RUNX3-202ENST00000338888 CCDC144CPQ8IYA2 1237 aa24.16■■□□□ 1.46
RUNX3-202ENST00000338888 RHPN1Q8TCX5 695 aa24.16■■□□□ 1.46
RUNX3-202ENST00000338888 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.16■■□□□ 1.46
RUNX3-202ENST00000338888 V9GYY5 206 aaPredicted RBP24.16■■□□□ 1.46
RUNX3-202ENST00000338888 VPS53Q5VIR6 699 aa24.16■■□□□ 1.46
RUNX3-202ENST00000338888 ZSCAN31Q96LW9 406 aaPredicted RBP24.16■■□□□ 1.46
RUNX3-202ENST00000338888 PTH1RQ03431 593 aa24.15■■□□□ 1.46
RUNX3-202ENST00000338888 TERF2Q15554 542 aa24.15■■□□□ 1.46
RUNX3-202ENST00000338888 TFIP11Q9UBB9 837 aaKnown RBP24.15■■□□□ 1.46
RUNX3-202ENST00000338888 GOLGA6L4A6NEF3 574 aa24.15■■□□□ 1.46
RUNX3-202ENST00000338888 SH2B1Q9NRF2 756 aaPredicted RBP24.15■■□□□ 1.46
RUNX3-202ENST00000338888 MTHFSDQ2M296 383 aaKnown RBP24.14■■□□□ 1.46
RUNX3-202ENST00000338888 PPP1R42Q7Z4L9 355 aa24.14■■□□□ 1.46
RUNX3-202ENST00000338888 SSH3Q8TE77 659 aa24.14■■□□□ 1.46
RUNX3-202ENST00000338888 CYP46A1Q9Y6A2 500 aa24.14■■□□□ 1.46
RUNX3-202ENST00000338888 KMT5BQ4FZB7 885 aa24.14■■□□□ 1.45
RUNX3-202ENST00000338888 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.14■■□□□ 1.45
RUNX3-202ENST00000338888 ZNF165P49910 485 aa24.14■■□□□ 1.45
RUNX3-202ENST00000338888 KRT222Q8N1A0 295 aa24.14■■□□□ 1.45
RUNX3-202ENST00000338888 DNAJC25Q9H1X3 360 aa24.14■■□□□ 1.45
RUNX3-202ENST00000338888 SOX12O15370 315 aa24.13■■□□□ 1.45
RUNX3-202ENST00000338888 TDRD7Q8NHU6 1098 aaKnown RBP24.13■■□□□ 1.45
RUNX3-202ENST00000338888 DNAJC5Q9H3Z4 198 aa24.13■■□□□ 1.45
RUNX3-202ENST00000338888 AMOTL2Q9Y2J4 779 aa24.13■■□□□ 1.45
RUNX3-202ENST00000338888 RAB11FIP3O75154 756 aa24.13■■□□□ 1.45
RUNX3-202ENST00000338888 SIRT1Q96EB6 747 aa24.13■■□□□ 1.45
RUNX3-202ENST00000338888 ZSWIM6Q9HCJ5 1215 aa24.13■■□□□ 1.45
RUNX3-202ENST00000338888 ZNF215Q9UL58 517 aaPredicted RBP24.13■■□□□ 1.45
RUNX3-202ENST00000338888 CCDC61Q9Y6R9 512 aa24.13■■□□□ 1.45
RUNX3-202ENST00000338888 TECPR2O15040 1411 aa24.12■■□□□ 1.45
RUNX3-202ENST00000338888 USP27XA6NNY8 438 aa24.12■■□□□ 1.45
RUNX3-202ENST00000338888 CCDC30Q5VVM6 783 aa24.12■■□□□ 1.45
RUNX3-202ENST00000338888 ELP1O95163 1332 aa24.12■■□□□ 1.45
RUNX3-202ENST00000338888 ARID5BQ14865 1188 aa24.12■■□□□ 1.45
RUNX3-202ENST00000338888 TPCN1Q9ULQ1 816 aa24.12■■□□□ 1.45
RUNX3-202ENST00000338888 ZNF397Q8NF99 534 aaPredicted RBP24.11■■□□□ 1.45
RUNX3-202ENST00000338888 SPATA32Q96LK8 384 aa24.11■■□□□ 1.45
RUNX3-202ENST00000338888 ARHGEF10O15013 1369 aa24.11■■□□□ 1.45
RUNX3-202ENST00000338888 PTPRUQ92729 1446 aa24.11■■□□□ 1.45
RUNX3-202ENST00000338888 KCNJ4P48050 445 aa24.1■■□□□ 1.45
RUNX3-202ENST00000338888 CLSTN2Q9H4D0 955 aa24.1■■□□□ 1.45
RUNX3-202ENST00000338888 PRR36Q9H6K5 1346 aa24.09■■□□□ 1.45
RUNX3-202ENST00000338888 NR1I2O75469 434 aa24.09■■□□□ 1.45
RUNX3-202ENST00000338888 KIF1BPQ96EK5 621 aa24.09■■□□□ 1.45
RUNX3-202ENST00000338888 DDX19AQ9NUU7 478 aaKnown RBP24.09■■□□□ 1.45
RUNX3-202ENST00000338888 SRGAP3O43295 1099 aa24.09■■□□□ 1.45
RUNX3-202ENST00000338888 LRRC8AQ8IWT6 810 aa24.09■■□□□ 1.45
RUNX3-202ENST00000338888 TTC21AQ8NDW8 1320 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms