RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 ZNF652Q9Y2D9 606 aa19.7■□□□□ 0.74
SEC13-201ENST00000337354 CAMTA2O94983 1202 aa19.69■□□□□ 0.74
SEC13-201ENST00000337354 DDX58O95786 925 aaKnown RBP19.69■□□□□ 0.74
SEC13-201ENST00000337354 PTGER2P43116 358 aa19.69■□□□□ 0.74
SEC13-201ENST00000337354 AIMP1Q12904 312 aaKnown RBP19.69■□□□□ 0.74
SEC13-201ENST00000337354 MSL1Q68DK7 614 aa19.69■□□□□ 0.74
SEC13-201ENST00000337354 TTLL7Q6ZT98 887 aa19.69■□□□□ 0.74
SEC13-201ENST00000337354 SRP68Q9UHB9 627 aaKnown RBP19.69■□□□□ 0.74
SEC13-201ENST00000337354 MAP3K15Q6ZN16 1313 aa19.68■□□□□ 0.74
SEC13-201ENST00000337354 TCERG1O14776 1098 aaKnown RBP19.68■□□□□ 0.74
SEC13-201ENST00000337354 POLD1P28340 1107 aa19.68■□□□□ 0.74
SEC13-201ENST00000337354 ANKRD13DQ6ZTN6 518 aa19.68■□□□□ 0.74
SEC13-201ENST00000337354 PHAXQ9H814 394 aaKnown RBP19.68■□□□□ 0.74
SEC13-201ENST00000337354 LAMB4A4D0S4 1761 aa19.68■□□□□ 0.74
SEC13-201ENST00000337354 PLBD2Q8NHP8 589 aa19.67■□□□□ 0.74
SEC13-201ENST00000337354 SSH1Q8WYL5 1049 aa19.67■□□□□ 0.74
SEC13-201ENST00000337354 BCL2L12Q9HB09 334 aa19.67■□□□□ 0.74
SEC13-201ENST00000337354 RARSP54136 660 aaKnown RBP19.66■□□□□ 0.74
SEC13-201ENST00000337354 BRPF1P55201 1214 aaPredicted RBP19.66■□□□□ 0.74
SEC13-201ENST00000337354 FLIIQ13045 1269 aa19.65■□□□□ 0.74
SEC13-201ENST00000337354 FKBP8Q14318 412 aa19.65■□□□□ 0.74
SEC13-201ENST00000337354 GIGYF2Q6Y7W6 1299 aaKnown RBP19.65■□□□□ 0.74
SEC13-201ENST00000337354 KLHL34Q8N239 644 aa19.65■□□□□ 0.74
SEC13-201ENST00000337354 MRPL50Q8N5N7 158 aaKnown RBP19.65■□□□□ 0.74
SEC13-201ENST00000337354 SGIP1Q9BQI5 828 aa19.65■□□□□ 0.74
SEC13-201ENST00000337354 HSP90AB3PQ58FF7 597 aa19.64■□□□□ 0.73
SEC13-201ENST00000337354 ZBTB3Q9H5J0 574 aa19.64■□□□□ 0.73
SEC13-201ENST00000337354 SMC4Q9NTJ3 1288 aa19.64■□□□□ 0.73
SEC13-201ENST00000337354 TM4SF1P30408 202 aa19.63■□□□□ 0.73
SEC13-201ENST00000337354 HLFQ16534 295 aa19.63■□□□□ 0.73
SEC13-201ENST00000337354 KSR2Q6VAB6 950 aa19.63■□□□□ 0.73
SEC13-201ENST00000337354 G2E3Q7L622 706 aa19.63■□□□□ 0.73
SEC13-201ENST00000337354 RIC3Q7Z5B4 369 aa19.63■□□□□ 0.73
SEC13-201ENST00000337354 SETDB2Q96T68 719 aa19.62■□□□□ 0.73
SEC13-201ENST00000337354 PTPRCP08575 1304 aa19.61■□□□□ 0.73
SEC13-201ENST00000337354 FKBP5Q13451 457 aaPredicted RBP19.61■□□□□ 0.73
SEC13-201ENST00000337354 PI4KAP2A4QPH2 592 aa19.6■□□□□ 0.73
SEC13-201ENST00000337354 TCIRG1Q13488 830 aa19.6■□□□□ 0.73
SEC13-201ENST00000337354 NFIXQ14938 502 aa19.6■□□□□ 0.73
SEC13-201ENST00000337354 TBC1D9BQ66K14 1250 aa19.6■□□□□ 0.73
SEC13-201ENST00000337354 PI4KAP1Q8N8J0 262 aa19.6■□□□□ 0.73
SEC13-201ENST00000337354 BCL2L13Q9BXK5 485 aa19.6■□□□□ 0.73
SEC13-201ENST00000337354 FHDC1Q9C0D6 1143 aaPredicted RBP19.6■□□□□ 0.73
SEC13-201ENST00000337354 PARP3Q9Y6F1 533 aa19.6■□□□□ 0.73
SEC13-201ENST00000337354 MMP10P09238 476 aa19.59■□□□□ 0.73
SEC13-201ENST00000337354 NIP7Q9Y221 180 aaKnown RBP eCLIP19.59■□□□□ 0.73
SEC13-201ENST00000337354 KIF16BQ96L93 1317 aa19.59■□□□□ 0.73
SEC13-201ENST00000337354 TRIM28Q13263 835 aaKnown RBP19.58■□□□□ 0.73
SEC13-201ENST00000337354 PARP10Q53GL7 1025 aa19.58■□□□□ 0.73
SEC13-201ENST00000337354 ZNF34Q8IZ26 560 aa19.58■□□□□ 0.73
SEC13-201ENST00000337354 ARHGAP45Q92619 1136 aa19.58■□□□□ 0.73
SEC13-201ENST00000337354 METTL22Q9BUU2 404 aaPredicted RBP19.58■□□□□ 0.73
SEC13-201ENST00000337354 MAP3K2Q9Y2U5 619 aa19.58■□□□□ 0.73
SEC13-201ENST00000337354 SCN7AQ01118 1682 aa19.58■□□□□ 0.72
SEC13-201ENST00000337354 IPO8O15397 1037 aaKnown RBP19.57■□□□□ 0.72
SEC13-201ENST00000337354 NEXNQ0ZGT2 675 aa19.57■□□□□ 0.72
SEC13-201ENST00000337354 BICDL1Q6ZP65 573 aa19.57■□□□□ 0.72
SEC13-201ENST00000337354 ATP10DQ9P241 1426 aa19.57■□□□□ 0.72
SEC13-201ENST00000337354 POLRMTO00411 1230 aaKnown RBP19.57■□□□□ 0.72
SEC13-201ENST00000337354 DNAAF4Q8WXU2 420 aa19.57■□□□□ 0.72
SEC13-201ENST00000337354 RCAN3Q9UKA8 241 aa19.57■□□□□ 0.72
SEC13-201ENST00000337354 NOB1Q9ULX3 412 aaKnown RBP19.57■□□□□ 0.72
SEC13-201ENST00000337354 BCAR3O75815 825 aa19.56■□□□□ 0.72
SEC13-201ENST00000337354 SERPINB2P05120 415 aa19.56■□□□□ 0.72
SEC13-201ENST00000337354 TPTE2Q6XPS3 522 aa19.56■□□□□ 0.72
SEC13-201ENST00000337354 ISCA1Q9BUE6 129 aa19.56■□□□□ 0.72
SEC13-201ENST00000337354 CARMIL3Q8ND23 1372 aa19.55■□□□□ 0.72
SEC13-201ENST00000337354 BCORQ6W2J9 1755 aa19.55■□□□□ 0.72
SEC13-201ENST00000337354 DDR1Q08345 913 aa19.55■□□□□ 0.72
SEC13-201ENST00000337354 PPP1R42Q7Z4L9 355 aa19.55■□□□□ 0.72
SEC13-201ENST00000337354 API5Q9BZZ5 524 aaKnown RBP19.55■□□□□ 0.72
SEC13-201ENST00000337354 ADCY9O60503 1353 aa19.54■□□□□ 0.72
SEC13-201ENST00000337354 GPTP24298 496 aa19.54■□□□□ 0.72
SEC13-201ENST00000337354 NLRP10Q86W26 655 aa19.54■□□□□ 0.72
SEC13-201ENST00000337354 CCDC191Q8NCU4 936 aa19.54■□□□□ 0.72
SEC13-201ENST00000337354 MYD88Q99836 296 aa19.54■□□□□ 0.72
SEC13-201ENST00000337354 NYXQ9GZU5 481 aa19.54■□□□□ 0.72
SEC13-201ENST00000337354 NBPF5PQ86XG9 351 aaPredicted RBP19.53■□□□□ 0.72
SEC13-201ENST00000337354 LINS1Q8NG48 757 aa19.53■□□□□ 0.72
SEC13-201ENST00000337354 SYT17Q9BSW7 474 aa19.53■□□□□ 0.72
SEC13-201ENST00000337354 F6X3S4 739 aa19.52■□□□□ 0.72
SEC13-201ENST00000337354 ATP5J2-PTCD1G3V325 749 aa19.52■□□□□ 0.72
SEC13-201ENST00000337354 SUSD4Q5VX71 490 aa19.52■□□□□ 0.72
SEC13-201ENST00000337354 RNF123Q5XPI4 1314 aa19.51■□□□□ 0.71
SEC13-201ENST00000337354 UBN2Q6ZU65 1347 aa19.51■□□□□ 0.71
SEC13-201ENST00000337354 DCAF8L1A6NGE4 600 aa19.51■□□□□ 0.71
SEC13-201ENST00000337354 GTF2E1P29083 439 aaPredicted RBP19.51■□□□□ 0.71
SEC13-201ENST00000337354 ZKSCAN2Q63HK3 967 aa19.51■□□□□ 0.71
SEC13-201ENST00000337354 FRAT1Q92837 279 aaPredicted RBP19.51■□□□□ 0.71
SEC13-201ENST00000337354 UTP14AQ9BVJ6 771 aaKnown RBP19.51■□□□□ 0.71
SEC13-201ENST00000337354 KIF13BQ9NQT8 1826 aa19.51■□□□□ 0.71
SEC13-201ENST00000337354 IBTKQ9P2D0 1353 aaPredicted RBP19.5■□□□□ 0.71
SEC13-201ENST00000337354 NPHP1O15259 732 aa19.5■□□□□ 0.71
SEC13-201ENST00000337354 IGKV5-2P06315 115 aa19.5■□□□□ 0.71
SEC13-201ENST00000337354 BEND3Q5T5X7 828 aa19.5■□□□□ 0.71
SEC13-201ENST00000337354 ATF7IPQ6VMQ6 1270 aa19.5■□□□□ 0.71
SEC13-201ENST00000337354 CNBD1Q8NA66 436 aa19.5■□□□□ 0.71
SEC13-201ENST00000337354 CWC25Q9NXE8 425 aaPredicted RBP19.5■□□□□ 0.71
SEC13-201ENST00000337354 PRR5LQ6MZQ0 368 aa19.49■□□□□ 0.71
SEC13-201ENST00000337354 SLC4A10Q6U841 1118 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms