RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 CBFA2T2O43439 604 aa15.44■□□□□ 0.06
COL2A1-201ENST00000337299 SMARCC1Q92922 1105 aaPredicted RBP15.44■□□□□ 0.06
COL2A1-201ENST00000337299 CHMP4CQ96CF2 233 aa15.44■□□□□ 0.06
COL2A1-201ENST00000337299 RTEL1-TNFRSF6BF6WH68 1400 aa15.44■□□□□ 0.06
COL2A1-201ENST00000337299 WDR62O43379 1518 aa15.44■□□□□ 0.06
COL2A1-201ENST00000337299 SYCP2Q9BX26 1530 aa15.44■□□□□ 0.06
COL2A1-201ENST00000337299 EIF4G3O43432 1585 aaKnown RBP15.44■□□□□ 0.06
COL2A1-201ENST00000337299 CCT2P78371 535 aaKnown RBP15.44■□□□□ 0.06
COL2A1-201ENST00000337299 NME9Q86XW9 330 aa15.44■□□□□ 0.06
COL2A1-201ENST00000337299 CBX8Q9HC52 389 aa15.44■□□□□ 0.06
COL2A1-201ENST00000337299 LMOD1P29536 600 aaPredicted RBP15.44■□□□□ 0.06
COL2A1-201ENST00000337299 TRDNQ13061 729 aa15.43■□□□□ 0.06
COL2A1-201ENST00000337299 TRMT2AQ8IZ69 625 aaKnown RBP15.43■□□□□ 0.06
COL2A1-201ENST00000337299 INTS4Q96HW7 963 aaKnown RBP15.43■□□□□ 0.06
COL2A1-201ENST00000337299 BOLA2Q9H3K6 86 aa15.43■□□□□ 0.06
COL2A1-201ENST00000337299 C14orf93Q9H972 538 aaKnown RBP15.43■□□□□ 0.06
COL2A1-201ENST00000337299 PIK3C2GO75747 1445 aa15.43■□□□□ 0.06
COL2A1-201ENST00000337299 VAMP4O75379 141 aa15.43■□□□□ 0.06
COL2A1-201ENST00000337299 ATF3P18847 181 aa15.43■□□□□ 0.06
COL2A1-201ENST00000337299 NEXNQ0ZGT2 675 aa15.43■□□□□ 0.06
COL2A1-201ENST00000337299 RAI14Q9P0K7 980 aa15.43■□□□□ 0.06
COL2A1-201ENST00000337299 EVA1CP58658 441 aa15.42■□□□□ 0.06
COL2A1-201ENST00000337299 NUP160Q12769 1436 aa15.42■□□□□ 0.06
COL2A1-201ENST00000337299 KLHL10Q6JEL2 608 aa15.42■□□□□ 0.06
COL2A1-201ENST00000337299 LRRC2Q9BYS8 371 aa15.42■□□□□ 0.06
COL2A1-201ENST00000337299 ZNF75DP51815 510 aa15.42■□□□□ 0.06
COL2A1-201ENST00000337299 EVCP57679 992 aa15.42■□□□□ 0.06
COL2A1-201ENST00000337299 FILIP1LQ4L180 1135 aa15.42■□□□□ 0.06
COL2A1-201ENST00000337299 KIAA1524Q8TCG1 905 aa15.42■□□□□ 0.06
COL2A1-201ENST00000337299 PDLIM2Q96JY6 352 aa15.41■□□□□ 0.06
COL2A1-201ENST00000337299 ZSCAN25Q6NSZ9 544 aa15.41■□□□□ 0.06
COL2A1-201ENST00000337299 SMARCE1Q969G3 411 aa15.41■□□□□ 0.06
COL2A1-201ENST00000337299 CARD6Q9BX69 1037 aa15.41■□□□□ 0.06
COL2A1-201ENST00000337299 MAGI3Q5TCQ9 1506 aa15.41■□□□□ 0.06
COL2A1-201ENST00000337299 PZPP20742 1482 aa15.41■□□□□ 0.06
COL2A1-201ENST00000337299 EPB41L2O43491 1005 aaKnown RBP15.41■□□□□ 0.06
COL2A1-201ENST00000337299 RNF187Q5TA31 235 aaPredicted RBP15.41■□□□□ 0.06
COL2A1-201ENST00000337299 POLR3AO14802 1390 aaPredicted RBP15.41■□□□□ 0.06
COL2A1-201ENST00000337299 GLRX3O76003 335 aaKnown RBP15.4■□□□□ 0.06
COL2A1-201ENST00000337299 SLC3A2P08195 630 aaKnown RBP15.4■□□□□ 0.06
COL2A1-201ENST00000337299 CALRP27797 417 aaKnown RBP15.4■□□□□ 0.06
COL2A1-201ENST00000337299 CEP85Q6P2H3 762 aa15.4■□□□□ 0.06
COL2A1-201ENST00000337299 KIF1BPQ96EK5 621 aa15.4■□□□□ 0.06
COL2A1-201ENST00000337299 IFNKQ9P0W0 207 aa15.4■□□□□ 0.06
COL2A1-201ENST00000337299 PALD1Q9ULE6 856 aa15.4■□□□□ 0.06
COL2A1-201ENST00000337299 CTTNBP2Q8WZ74 1663 aa15.4■□□□□ 0.06
COL2A1-201ENST00000337299 KIF5CO60282 957 aa15.4■□□□□ 0.06
COL2A1-201ENST00000337299 ANAPC15P60006 121 aa15.4■□□□□ 0.06
COL2A1-201ENST00000337299 SAFBQ15424 915 aaKnown RBP eCLIP15.4■□□□□ 0.06
COL2A1-201ENST00000337299 CCDC8Q9H0W5 538 aaPredicted RBP15.4■□□□□ 0.06
COL2A1-201ENST00000337299 RABEP2Q9H5N1 569 aa15.4■□□□□ 0.06
COL2A1-201ENST00000337299 PUF60Q9UHX1 559 aaKnown RBP15.4■□□□□ 0.06
COL2A1-201ENST00000337299 SCAF11Q99590 1463 aaKnown RBP15.4■□□□□ 0.06
COL2A1-201ENST00000337299 IBTKQ9P2D0 1353 aaPredicted RBP15.4■□□□□ 0.06
COL2A1-201ENST00000337299 SHTN1A0MZ66 631 aa15.4■□□□□ 0.06
COL2A1-201ENST00000337299 POLR3DP05423 398 aaPredicted RBP15.4■□□□□ 0.06
COL2A1-201ENST00000337299 ZSCAN26Q16670 478 aa15.4■□□□□ 0.06
COL2A1-201ENST00000337299 ZNF692Q9BU19 519 aaPredicted RBP15.4■□□□□ 0.06
COL2A1-201ENST00000337299 CTAGE5O15320 804 aa15.4■□□□□ 0.06
COL2A1-201ENST00000337299 DHX8Q14562 1220 aaKnown RBP15.4■□□□□ 0.06
COL2A1-201ENST00000337299 FAM107BQ9H098 131 aa15.4■□□□□ 0.06
COL2A1-201ENST00000337299 COL17A1Q9UMD9 1497 aaPredicted RBP15.39■□□□□ 0.05
COL2A1-201ENST00000337299 HIP1O00291 1037 aa15.39■□□□□ 0.05
COL2A1-201ENST00000337299 CHMLP26374 656 aa15.39■□□□□ 0.05
COL2A1-201ENST00000337299 KARSQ15046 597 aaKnown RBP15.39■□□□□ 0.05
COL2A1-201ENST00000337299 ARHGAP45Q92619 1136 aa15.39■□□□□ 0.05
COL2A1-201ENST00000337299 DENND4BO75064 1496 aaPredicted RBP15.39■□□□□ 0.05
COL2A1-201ENST00000337299 OAS2P29728 719 aaKnown RBP15.39■□□□□ 0.05
COL2A1-201ENST00000337299 GBP3Q9H0R5 595 aa15.39■□□□□ 0.05
COL2A1-201ENST00000337299 CCDC150Q8NCX0 1101 aa15.38■□□□□ 0.05
COL2A1-201ENST00000337299 NPHP3Q7Z494 1330 aa15.38■□□□□ 0.05
COL2A1-201ENST00000337299 CT47A1Q5JQC4 288 aaPredicted RBP15.38■□□□□ 0.05
COL2A1-201ENST00000337299 RAB11FIP4Q86YS3 637 aa15.38■□□□□ 0.05
COL2A1-201ENST00000337299 IVLP07476 585 aa15.38■□□□□ 0.05
COL2A1-201ENST00000337299 RIC3Q7Z5B4 369 aa15.38■□□□□ 0.05
COL2A1-201ENST00000337299 ANKLE2Q86XL3 938 aa15.38■□□□□ 0.05
COL2A1-201ENST00000337299 TICAM2Q86XR7 235 aa15.38■□□□□ 0.05
COL2A1-201ENST00000337299 TCOF1Q13428 1488 aaKnown RBP15.38■□□□□ 0.05
COL2A1-201ENST00000337299 NCBP1Q09161 790 aaKnown RBP15.37■□□□□ 0.05
COL2A1-201ENST00000337299 UTP14AQ9BVJ6 771 aaKnown RBP15.37■□□□□ 0.05
COL2A1-201ENST00000337299 AMOTL2Q9Y2J4 779 aa15.37■□□□□ 0.05
COL2A1-201ENST00000337299 IL16Q14005 1332 aa15.37■□□□□ 0.05
COL2A1-201ENST00000337299 RHOXF2BP0C7M4 288 aa15.37■□□□□ 0.05
COL2A1-201ENST00000337299 UBASH3AP57075 661 aa15.37■□□□□ 0.05
COL2A1-201ENST00000337299 RHOXF2Q9BQY4 288 aa15.37■□□□□ 0.05
COL2A1-201ENST00000337299 RAPGEF4Q8WZA2 1011 aa15.37■□□□□ 0.05
COL2A1-201ENST00000337299 TERF2Q15554 542 aa15.37■□□□□ 0.05
COL2A1-201ENST00000337299 JMYQ8N9B5 988 aa15.37■□□□□ 0.05
COL2A1-201ENST00000337299 BRF1Q92994 677 aa15.37■□□□□ 0.05
COL2A1-201ENST00000337299 PHACTR3Q96KR7 559 aa15.37■□□□□ 0.05
COL2A1-201ENST00000337299 GTF2E1P29083 439 aaPredicted RBP15.36■□□□□ 0.05
COL2A1-201ENST00000337299 HNRNPH2P55795 449 aaKnown RBP15.36■□□□□ 0.05
COL2A1-201ENST00000337299 CTR9Q6PD62 1173 aa15.36■□□□□ 0.05
COL2A1-201ENST00000337299 KDM5BQ9UGL1 1544 aa15.36■□□□□ 0.05
COL2A1-201ENST00000337299 A0A1B0GUL7 405 aa15.36■□□□□ 0.05
COL2A1-201ENST00000337299 ZC3H6P61129 1189 aaKnown RBP15.36■□□□□ 0.05
COL2A1-201ENST00000337299 ABCA5Q8WWZ7 1642 aa15.36■□□□□ 0.05
COL2A1-201ENST00000337299 FOXO3O43524 673 aa15.36■□□□□ 0.05
COL2A1-201ENST00000337299 CAVIN2O95810 425 aa15.36■□□□□ 0.05
COL2A1-201ENST00000337299 DNAJC21Q5F1R6 531 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms