RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 BMP15O95972 392 aa15.07■□□□□ 0
HLCS-201ENST00000336648 TIGD1Q96MW7 591 aa15.07■□□□□ 0
HLCS-201ENST00000336648 RARSP54136 660 aaKnown RBP15.07■□□□□ 0
HLCS-201ENST00000336648 LDHCP07864 332 aa15.07■□□□□ 0
HLCS-201ENST00000336648 TMOD3Q9NYL9 352 aa15.07■□□□□ 0
HLCS-201ENST00000336648 NSD2O96028 1365 aa15.06■□□□□ 0
HLCS-201ENST00000336648 KLHL10Q6JEL2 608 aa15.06■□□□□ 0
HLCS-201ENST00000336648 TDRD12Q587J7 1177 aaKnown RBP15.06■□□□□ 0
HLCS-201ENST00000336648 MINDY4BA8MYZ0 360 aa15.06■□□□□ 0
HLCS-201ENST00000336648 NLRP5P59047 1200 aa15.06■□□□□ 0
HLCS-201ENST00000336648 TRAF1Q13077 416 aa15.06■□□□□ 0
HLCS-201ENST00000336648 PAXBP1Q9Y5B6 917 aa15.06■□□□□ 0
HLCS-201ENST00000336648 RRS1Q15050 365 aaKnown RBP15.06■□□□□ 0
HLCS-201ENST00000336648 TEX13AQ9BXU3 409 aaPredicted RBP15.06■□□□□ 0
HLCS-201ENST00000336648 GOPCQ9HD26 462 aa15.06■□□□□ 0
HLCS-201ENST00000336648 IRX3P78415 501 aaPredicted RBP15.05■□□□□ 0
HLCS-201ENST00000336648 FSIP1Q8NA03 581 aa15.05■□□□□ 0
HLCS-201ENST00000336648 RMND1Q9NWS8 449 aa15.05■□□□□ 0
HLCS-201ENST00000336648 MTIF2P46199 727 aaKnown RBP15.05■□□□□ 0
HLCS-201ENST00000336648 SPECC1Q5M775 1068 aa15.05■□□□□ 0
HLCS-201ENST00000336648 WDR66Q8TBY9 1149 aa15.05■□□□□ 0
HLCS-201ENST00000336648 PLVAPQ9BX97 442 aa15.05■□□□□ 0
HLCS-201ENST00000336648 PPP4R3BQ5MIZ7 849 aa15.05■□□□□ -0
HLCS-201ENST00000336648 ZPR1O75312 459 aa15.05■□□□□ -0
HLCS-201ENST00000336648 SCLT1Q96NL6 688 aa15.05■□□□□ -0
HLCS-201ENST00000336648 ZSCAN16Q9H4T2 348 aaPredicted RBP15.05■□□□□ -0
HLCS-201ENST00000336648 DBF4Q9UBU7 674 aaPredicted RBP15.05■□□□□ -0
HLCS-201ENST00000336648 FSD2A1L4K1 749 aa15.05■□□□□ -0
HLCS-201ENST00000336648 PRIMPOLQ96LW4 560 aa15.05■□□□□ -0
HLCS-201ENST00000336648 IFIT3O14879 490 aaKnown RBP15.04■□□□□ -0
HLCS-201ENST00000336648 GRIPAP1Q4V328 841 aa15.04■□□□□ -0
HLCS-201ENST00000336648 BOLA2Q9H3K6 86 aa15.04■□□□□ -0
HLCS-201ENST00000336648 CTNNA2P26232 953 aa15.04■□□□□ -0
HLCS-201ENST00000336648 CKAP4Q07065 602 aaKnown RBP15.04■□□□□ -0
HLCS-201ENST00000336648 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.04■□□□□ -0
HLCS-201ENST00000336648 V9GYY5 206 aaPredicted RBP15.04■□□□□ -0
HLCS-201ENST00000336648 ARAP1Q96P48 1450 aa15.03■□□□□ -0
HLCS-201ENST00000336648 CCDC171Q6TFL3 1326 aa15.03■□□□□ -0
HLCS-201ENST00000336648 CCDC96Q2M329 555 aa15.03■□□□□ -0
HLCS-201ENST00000336648 FERMT2Q96AC1 680 aa15.03■□□□□ -0
HLCS-201ENST00000336648 ECHDC1Q9NTX5 307 aa15.03■□□□□ -0
HLCS-201ENST00000336648 PIBF1Q8WXW3 757 aa15.03■□□□□ -0
HLCS-201ENST00000336648 MYD88Q99836 296 aa15.03■□□□□ -0
HLCS-201ENST00000336648 CCDC40Q4G0X9 1142 aa15.03■□□□□ -0
HLCS-201ENST00000336648 BMP2KLQ5H9B9 411 aa15.03■□□□□ -0
HLCS-201ENST00000336648 CTR9Q6PD62 1173 aa15.03■□□□□ -0
HLCS-201ENST00000336648 UBA5Q9GZZ9 404 aa15.03■□□□□ -0
HLCS-201ENST00000336648 IFT140Q96RY7 1462 aa15.03■□□□□ -0
HLCS-201ENST00000336648 LRPPRCP42704 1394 aaKnown RBP15.03■□□□□ -0
HLCS-201ENST00000336648 RANBP6O60518 1105 aaKnown RBP15.03■□□□□ -0
HLCS-201ENST00000336648 CTNNBL1Q8WYA6 563 aaPredicted RBP15.03■□□□□ -0
HLCS-201ENST00000336648 SSH1Q8WYL5 1049 aa15.03■□□□□ -0
HLCS-201ENST00000336648 GTPBP4Q9BZE4 634 aaKnown RBP15.03■□□□□ -0
HLCS-201ENST00000336648 IARSP41252 1262 aaKnown RBP15.02■□□□□ -0
HLCS-201ENST00000336648 UBE2HP62256 183 aa15.02■□□□□ -0
HLCS-201ENST00000336648 TUBB4BP68371 445 aa15.02■□□□□ -0
HLCS-201ENST00000336648 CTAGE1Q96RT6 745 aa15.02■□□□□ -0
HLCS-201ENST00000336648 ZHX1Q9UKY1 873 aaPredicted RBP15.02■□□□□ -0
HLCS-201ENST00000336648 TTC21BQ7Z4L5 1316 aa15.02■□□□□ -0
HLCS-201ENST00000336648 SPTY2D1Q68D10 685 aaPredicted RBP15.02■□□□□ -0
HLCS-201ENST00000336648 CCDC102BQ68D86 513 aa15.02■□□□□ -0
HLCS-201ENST00000336648 USP37Q86T82 979 aa15.02■□□□□ -0
HLCS-201ENST00000336648 HSPA4P34932 840 aa15.02■□□□□ -0
HLCS-201ENST00000336648 SPAG1Q07617 926 aa15.02■□□□□ -0
HLCS-201ENST00000336648 CEP112Q8N8E3 955 aa15.02■□□□□ -0
HLCS-201ENST00000336648 SUPT6HQ7KZ85 1726 aaKnown RBP15.02□□□□□ -0.01
HLCS-201ENST00000336648 STX6O43752 255 aa15.02□□□□□ -0.01
HLCS-201ENST00000336648 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.02□□□□□ -0.01
HLCS-201ENST00000336648 PPP1R1BQ9UD71 204 aaPredicted RBP15.02□□□□□ -0.01
HLCS-201ENST00000336648 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.02□□□□□ -0.011e-7■□□□□ 11.2
HLCS-201ENST00000336648 PDE4BQ07343 736 aa15.02□□□□□ -0.01
HLCS-201ENST00000336648 SNW1Q13573 536 aaKnown RBP15.02□□□□□ -0.01
HLCS-201ENST00000336648 TSNARE1Q96NA8 513 aa15.02□□□□□ -0.01
HLCS-201ENST00000336648 SREK1Q8WXA9 508 aaKnown RBP15.01□□□□□ -0.01
HLCS-201ENST00000336648 FERP16591 822 aa15.01□□□□□ -0.01
HLCS-201ENST00000336648 HLTFQ14527 1009 aaKnown RBP eCLIP15.01□□□□□ -0.01
HLCS-201ENST00000336648 UBE2Q2Q8WVN8 375 aa15.01□□□□□ -0.01
HLCS-201ENST00000336648 IL16Q14005 1332 aa15.01□□□□□ -0.01
HLCS-201ENST00000336648 NAP1L3Q99457 506 aaPredicted RBP15.01□□□□□ -0.01
HLCS-201ENST00000336648 PRPHP41219 470 aa15.01□□□□□ -0.01
HLCS-201ENST00000336648 FBF1Q8TES7 1133 aa15.01□□□□□ -0.01
HLCS-201ENST00000336648 LRRC45Q96CN5 670 aa15.01□□□□□ -0.01
HLCS-201ENST00000336648 ACTN2P35609 894 aa15.01□□□□□ -0.01
HLCS-201ENST00000336648 LMAN1P49257 510 aa15.01□□□□□ -0.01
HLCS-201ENST00000336648 TNPO1Q92973 898 aaKnown RBP15.01□□□□□ -0.01
HLCS-201ENST00000336648 BAG3O95817 575 aa15□□□□□ -0.01
HLCS-201ENST00000336648 MPHOSPH6Q99547 160 aaKnown RBP15□□□□□ -0.01
HLCS-201ENST00000336648 DYNC1I1O14576 645 aa15□□□□□ -0.01
HLCS-201ENST00000336648 TMC6Q7Z403 805 aa15□□□□□ -0.01
HLCS-201ENST00000336648 NBPF7P0C2Y1 421 aaPredicted RBP15□□□□□ -0.01
HLCS-201ENST00000336648 UBA7P41226 1012 aa15□□□□□ -0.01
HLCS-201ENST00000336648 HOMER2Q9NSB8 354 aa15□□□□□ -0.01
HLCS-201ENST00000336648 CDC5LQ99459 802 aaKnown RBP15□□□□□ -0.01
HLCS-201ENST00000336648 ANKIB1Q9P2G1 1089 aa15□□□□□ -0.01
HLCS-201ENST00000336648 UQCRFS1P1P0C7P4 283 aa14.99□□□□□ -0.01
HLCS-201ENST00000336648 KLHL40Q2TBA0 621 aa14.99□□□□□ -0.01
HLCS-201ENST00000336648 DDX46Q7L014 1031 aaKnown RBP14.99□□□□□ -0.01
HLCS-201ENST00000336648 CCDC155Q8N6L0 562 aa14.99□□□□□ -0.01
HLCS-201ENST00000336648 NCOA7Q8NI08 942 aa14.99□□□□□ -0.01
HLCS-201ENST00000336648 ERMNQ8TAM6 284 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms