RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 NBPF15Q8N660 670 aa15.43■□□□□ 0.06
LIMK1-201ENST00000336180 STRCQ7RTU9 1775 aa15.43■□□□□ 0.06
LIMK1-201ENST00000336180 CHAMP1Q96JM3 812 aa15.43■□□□□ 0.06
LIMK1-201ENST00000336180 ASAP1Q9ULH1 1129 aa15.43■□□□□ 0.06
LIMK1-201ENST00000336180 DDX58O95786 925 aaKnown RBP15.42■□□□□ 0.06
LIMK1-201ENST00000336180 XIRP1Q702N8 1843 aaKnown RBP15.42■□□□□ 0.06
LIMK1-201ENST00000336180 CASC1Q6TDU7 716 aa15.42■□□□□ 0.06
LIMK1-201ENST00000336180 EDC3Q96F86 508 aaKnown RBP15.42■□□□□ 0.06
LIMK1-201ENST00000336180 UPF3BQ9BZI7 483 aaKnown RBP15.42■□□□□ 0.06
LIMK1-201ENST00000336180 POLA2Q14181 598 aa15.41■□□□□ 0.06
LIMK1-201ENST00000336180 AACSQ86V21 672 aa15.41■□□□□ 0.06
LIMK1-201ENST00000336180 LINS1Q8NG48 757 aa15.41■□□□□ 0.06
LIMK1-201ENST00000336180 LMO7Q8WWI1 1683 aa15.41■□□□□ 0.06
LIMK1-201ENST00000336180 DCCP43146 1447 aa15.41■□□□□ 0.06
LIMK1-201ENST00000336180 NEURL1BA8MQ27 555 aa15.41■□□□□ 0.06
LIMK1-201ENST00000336180 NEXNQ0ZGT2 675 aa15.41■□□□□ 0.06
LIMK1-201ENST00000336180 CWC27Q6UX04 472 aaKnown RBP15.41■□□□□ 0.06
LIMK1-201ENST00000336180 NCAPD2Q15021 1401 aa15.41■□□□□ 0.06
LIMK1-201ENST00000336180 PHRF1Q9P1Y6 1649 aaKnown RBP15.41■□□□□ 0.06
LIMK1-201ENST00000336180 CHGBP05060 677 aa15.41■□□□□ 0.06
LIMK1-201ENST00000336180 SALL3Q9BXA9 1300 aa15.4■□□□□ 0.06
LIMK1-201ENST00000336180 A0A087WZG4 1122 aa15.4■□□□□ 0.06
LIMK1-201ENST00000336180 ERC2O15083 957 aa15.4■□□□□ 0.06
LIMK1-201ENST00000336180 KDM3BQ7LBC6 1761 aa15.4■□□□□ 0.06
LIMK1-201ENST00000336180 HEG1Q9ULI3 1381 aa15.4■□□□□ 0.06
LIMK1-201ENST00000336180 CHMLP26374 656 aa15.39■□□□□ 0.06
LIMK1-201ENST00000336180 KIF1BPQ96EK5 621 aa15.39■□□□□ 0.06
LIMK1-201ENST00000336180 GCKRQ14397 625 aa15.39■□□□□ 0.05
LIMK1-201ENST00000336180 TPRNQ4KMQ1 711 aa15.39■□□□□ 0.05
LIMK1-201ENST00000336180 BOLA2Q9H3K6 86 aa15.39■□□□□ 0.05
LIMK1-201ENST00000336180 SASH1O94885 1247 aa15.38■□□□□ 0.05
LIMK1-201ENST00000336180 CPA1P15085 419 aa15.38■□□□□ 0.05
LIMK1-201ENST00000336180 FOXD4L6Q3SYB3 417 aaPredicted RBP15.38■□□□□ 0.05
LIMK1-201ENST00000336180 FOXD4L3Q6VB84 417 aaPredicted RBP15.38■□□□□ 0.05
LIMK1-201ENST00000336180 ACSBG1Q96GR2 724 aa15.38■□□□□ 0.05
LIMK1-201ENST00000336180 ESYT1Q9BSJ8 1104 aa15.38■□□□□ 0.05
LIMK1-201ENST00000336180 IFIT2P09913 472 aaKnown RBP15.38■□□□□ 0.05
LIMK1-201ENST00000336180 PKP1Q13835 747 aa15.38■□□□□ 0.05
LIMK1-201ENST00000336180 ZGPATQ8N5A5 531 aaKnown RBP15.38■□□□□ 0.05
LIMK1-201ENST00000336180 PI4K2BQ8TCG2 481 aa15.38■□□□□ 0.05
LIMK1-201ENST00000336180 COL5A2P05997 1499 aaPredicted RBP15.38■□□□□ 0.05
LIMK1-201ENST00000336180 COL18A1P39060 1754 aa15.38■□□□□ 0.05
LIMK1-201ENST00000336180 PCDH11XQ9BZA7 1347 aa15.38■□□□□ 0.05
LIMK1-201ENST00000336180 PCDH11YQ9BZA8 1340 aa15.38■□□□□ 0.05
LIMK1-201ENST00000336180 DNAJC10Q8IXB1 793 aa15.38■□□□□ 0.05
LIMK1-201ENST00000336180 SYNE4Q8N205 404 aa15.38■□□□□ 0.05
LIMK1-201ENST00000336180 EAF2Q96CJ1 260 aaPredicted RBP15.38■□□□□ 0.05
LIMK1-201ENST00000336180 FAM177BA6PVY3 158 aa15.37■□□□□ 0.05
LIMK1-201ENST00000336180 K7ELQ4 463 aaPredicted RBP15.37■□□□□ 0.05
LIMK1-201ENST00000336180 NEK4P51957 841 aa15.37■□□□□ 0.05
LIMK1-201ENST00000336180 G3BP1Q13283 466 aaKnown RBP eCLIP15.37■□□□□ 0.05
LIMK1-201ENST00000336180 CLASRPQ8N2M8 674 aaKnown RBP15.37■□□□□ 0.05
LIMK1-201ENST00000336180 ZNF594Q96JF6 807 aaPredicted RBP15.37■□□□□ 0.05
LIMK1-201ENST00000336180 METTL22Q9BUU2 404 aaPredicted RBP15.37■□□□□ 0.05
LIMK1-201ENST00000336180 LRP10Q7Z4F1 713 aa15.37■□□□□ 0.05
LIMK1-201ENST00000336180 CPDO75976 1380 aa15.36■□□□□ 0.05
LIMK1-201ENST00000336180 ALDH1L1O75891 902 aa15.36■□□□□ 0.05
LIMK1-201ENST00000336180 GPTP24298 496 aa15.36■□□□□ 0.05
LIMK1-201ENST00000336180 GLIPR1L2Q4G1C9 344 aa15.36■□□□□ 0.05
LIMK1-201ENST00000336180 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.36■□□□□ 0.05
LIMK1-201ENST00000336180 TMOD3Q9NYL9 352 aa15.36■□□□□ 0.05
LIMK1-201ENST00000336180 SSFA2P28290 1259 aa15.36■□□□□ 0.05
LIMK1-201ENST00000336180 PIGBQ92521 554 aa15.36■□□□□ 0.05
LIMK1-201ENST00000336180 CARD10Q9BWT7 1032 aa15.36■□□□□ 0.05
LIMK1-201ENST00000336180 OSBPL3Q9H4L5 887 aa15.36■□□□□ 0.05
LIMK1-201ENST00000336180 C5P01031 1676 aa15.35■□□□□ 0.05
LIMK1-201ENST00000336180 SLFNL1Q499Z3 407 aa15.35■□□□□ 0.05
LIMK1-201ENST00000336180 LMBR1LQ6UX01 489 aa15.35■□□□□ 0.05
LIMK1-201ENST00000336180 CHMP5Q9NZZ3 219 aa15.35■□□□□ 0.05
LIMK1-201ENST00000336180 OVOS2A0A0G2JMS6 1433 aa15.35■□□□□ 0.05
LIMK1-201ENST00000336180 REC8O95072 547 aa15.35■□□□□ 0.05
LIMK1-201ENST00000336180 KCNQ4P56696 695 aa15.34■□□□□ 0.05
LIMK1-201ENST00000336180 GSE1Q14687 1217 aa15.34■□□□□ 0.05
LIMK1-201ENST00000336180 RAB11FIP3O75154 756 aa15.34■□□□□ 0.05
LIMK1-201ENST00000336180 TFCP2Q12800 502 aa15.33■□□□□ 0.04
LIMK1-201ENST00000336180 SMIM5Q71RC9 77 aa15.33■□□□□ 0.04
LIMK1-201ENST00000336180 TNPO1Q92973 898 aaKnown RBP15.33■□□□□ 0.04
LIMK1-201ENST00000336180 FAM227BQ96M60 508 aa15.33■□□□□ 0.04
LIMK1-201ENST00000336180 PXDNLA1KZ92 1463 aa15.32■□□□□ 0.04
LIMK1-201ENST00000336180 STAP2Q9UGK3 403 aa15.32■□□□□ 0.04
LIMK1-201ENST00000336180 NCOA3Q9Y6Q9 1424 aa15.32■□□□□ 0.04
LIMK1-201ENST00000336180 COL9A3Q14050 684 aaPredicted RBP15.32■□□□□ 0.04
LIMK1-201ENST00000336180 SNX21Q969T3 373 aa15.32■□□□□ 0.04
LIMK1-201ENST00000336180 FAM89AQ96GI7 184 aa15.32■□□□□ 0.04
LIMK1-201ENST00000336180 NEUROD6Q96NK8 337 aa15.32■□□□□ 0.04
LIMK1-201ENST00000336180 DNAJC2Q99543 621 aaKnown RBP15.32■□□□□ 0.04
LIMK1-201ENST00000336180 MCM4P33991 863 aa15.31■□□□□ 0.04
LIMK1-201ENST00000336180 PRIM1P49642 420 aaKnown RBP15.31■□□□□ 0.04
LIMK1-201ENST00000336180 CHMP4AQ9BY43 222 aa15.31■□□□□ 0.04
LIMK1-201ENST00000336180 RABEP1Q15276 862 aa15.31■□□□□ 0.04
LIMK1-201ENST00000336180 PTH1RQ03431 593 aa15.3■□□□□ 0.04
LIMK1-201ENST00000336180 FAM182BQ5T319 152 aa15.3■□□□□ 0.04
LIMK1-201ENST00000336180 DIAPH3Q9NSV4 1193 aa15.3■□□□□ 0.04
LIMK1-201ENST00000336180 RASEFQ8IZ41 740 aa15.3■□□□□ 0.04
LIMK1-201ENST00000336180 TCEANC2Q96MN5 208 aa15.3■□□□□ 0.04
LIMK1-201ENST00000336180 ECHDC1Q9NTX5 307 aa15.3■□□□□ 0.04
LIMK1-201ENST00000336180 BRPF3Q9ULD4 1205 aa15.3■□□□□ 0.04
LIMK1-201ENST00000336180 TBC1D2BQ9UPU7 963 aa15.3■□□□□ 0.04
LIMK1-201ENST00000336180 TIMM10P62072 90 aa15.3■□□□□ 0.04
LIMK1-201ENST00000336180 CNTROBQ8N137 903 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms