RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 AMIGO3Q86WK7 504 aa27.32■■□□□ 1.96
TPM1-204ENST00000334895 MAP3K2Q9Y2U5 619 aa27.32■■□□□ 1.96
TPM1-204ENST00000334895 PXDNLA1KZ92 1463 aa27.32■■□□□ 1.96
TPM1-204ENST00000334895 DDX58O95786 925 aaKnown RBP27.31■■□□□ 1.96
TPM1-204ENST00000334895 HMGB2P26583 209 aaKnown RBP27.31■■□□□ 1.96
TPM1-204ENST00000334895 ANKRD13DQ6ZTN6 518 aa27.31■■□□□ 1.96
TPM1-204ENST00000334895 DNAAF4Q8WXU2 420 aa27.31■■□□□ 1.96
TPM1-204ENST00000334895 UBR3Q6ZT12 1888 aa27.31■■□□□ 1.96
TPM1-204ENST00000334895 SMIM5Q71RC9 77 aa27.3■■□□□ 1.96
TPM1-204ENST00000334895 COL15A1P39059 1388 aa27.3■■□□□ 1.96
TPM1-204ENST00000334895 GNPATO15228 680 aa27.3■■□□□ 1.96
TPM1-204ENST00000334895 RPS6KA4O75676 772 aa27.3■■□□□ 1.96
TPM1-204ENST00000334895 INTS3Q68E01 1043 aaKnown RBP27.3■■□□□ 1.96
TPM1-204ENST00000334895 SLC4A10Q6U841 1118 aa27.3■■□□□ 1.96
TPM1-204ENST00000334895 PLBD2Q8NHP8 589 aa27.3■■□□□ 1.96
TPM1-204ENST00000334895 EXOC6Q8TAG9 804 aa27.3■■□□□ 1.96
TPM1-204ENST00000334895 ANO8Q9HCE9 1232 aaPredicted RBP27.3■■□□□ 1.96
TPM1-204ENST00000334895 MVPQ14764 893 aaKnown RBP27.29■■□□□ 1.96
TPM1-204ENST00000334895 RIC3Q7Z5B4 369 aa27.29■■□□□ 1.96
TPM1-204ENST00000334895 ZBTB3Q9H5J0 574 aa27.27■■□□□ 1.96
TPM1-204ENST00000334895 ATP10DQ9P241 1426 aa27.27■■□□□ 1.96
TPM1-204ENST00000334895 BEND3Q5T5X7 828 aa27.27■■□□□ 1.96
TPM1-204ENST00000334895 ITPRIPQ8IWB1 547 aa27.27■■□□□ 1.96
TPM1-204ENST00000334895 AK7Q96M32 723 aa27.27■■□□□ 1.96
TPM1-204ENST00000334895 TBC1D2BQ9UPU7 963 aa27.27■■□□□ 1.96
TPM1-204ENST00000334895 MAP3K15Q6ZN16 1313 aa27.26■■□□□ 1.95
TPM1-204ENST00000334895 ZNF827Q17R98 1081 aa27.26■■□□□ 1.95
TPM1-204ENST00000334895 KIF6Q6ZMV9 814 aa27.26■■□□□ 1.95
TPM1-204ENST00000334895 DZIP3Q86Y13 1208 aaKnown RBP27.26■■□□□ 1.95
TPM1-204ENST00000334895 C4AP0C0L4 1744 aa27.25■■□□□ 1.95
TPM1-204ENST00000334895 BCORQ6W2J9 1755 aa27.25■■□□□ 1.95
TPM1-204ENST00000334895 AKT1S1Q96B36 256 aa27.25■■□□□ 1.95
TPM1-204ENST00000334895 METTL22Q9BUU2 404 aaPredicted RBP27.25■■□□□ 1.95
TPM1-204ENST00000334895 RTCBQ9Y3I0 505 aaKnown RBP27.25■■□□□ 1.95
TPM1-204ENST00000334895 QSER1Q2KHR3 1735 aa27.25■■□□□ 1.95
TPM1-204ENST00000334895 CCT4P50991 539 aaKnown RBP27.24■■□□□ 1.95
TPM1-204ENST00000334895 ARXQ96QS3 562 aa27.24■■□□□ 1.95
TPM1-204ENST00000334895 NUP98P52948 1817 aa27.23■■□□□ 1.95
TPM1-204ENST00000334895 PSDA5PKW4 1024 aaPredicted RBP27.23■■□□□ 1.95
TPM1-204ENST00000334895 CAMTA2O94983 1202 aa27.23■■□□□ 1.95
TPM1-204ENST00000334895 HLFQ16534 295 aa27.23■■□□□ 1.95
TPM1-204ENST00000334895 NPM2Q86SE8 214 aaKnown RBP27.23■■□□□ 1.95
TPM1-204ENST00000334895 GTF3C3Q9Y5Q9 886 aa27.23■■□□□ 1.95
TPM1-204ENST00000334895 SCN7AQ01118 1682 aa27.22■■□□□ 1.95
TPM1-204ENST00000334895 IGKV5-2P06315 115 aa27.22■■□□□ 1.95
TPM1-204ENST00000334895 R3HDM1Q15032 1099 aaKnown RBP27.22■■□□□ 1.95
TPM1-204ENST00000334895 MYD88Q99836 296 aa27.22■■□□□ 1.95
TPM1-204ENST00000334895 A0A087WZG4 1122 aa27.21■■□□□ 1.95
TPM1-204ENST00000334895 ERVV-1B6SEH8 477 aa27.21■■□□□ 1.95
TPM1-204ENST00000334895 SRCIN1Q9C0H9 1055 aa27.21■■□□□ 1.95
TPM1-204ENST00000334895 DDX19BQ9UMR2 479 aa27.21■■□□□ 1.95
TPM1-204ENST00000334895 CWF19L2Q2TBE0 894 aaKnown RBP27.2■■□□□ 1.95
TPM1-204ENST00000334895 LINS1Q8NG48 757 aa27.2■■□□□ 1.95
TPM1-204ENST00000334895 ARHGEF1Q92888 912 aaKnown RBP27.2■■□□□ 1.95
TPM1-204ENST00000334895 STK32BQ9NY57 414 aa27.2■■□□□ 1.95
TPM1-204ENST00000334895 ANKRD36CQ5JPF3 1778 aa27.2■■□□□ 1.94
TPM1-204ENST00000334895 ZBTB7BO15156 539 aaPredicted RBP27.19■■□□□ 1.94
TPM1-204ENST00000334895 PHF14O94880 888 aa27.19■■□□□ 1.94
TPM1-204ENST00000334895 SLC15A2Q16348 729 aa27.19■■□□□ 1.94
TPM1-204ENST00000334895 GIGYF2Q6Y7W6 1299 aaKnown RBP27.19■■□□□ 1.94
TPM1-204ENST00000334895 AFDNP55196 1824 aaKnown RBP27.19■■□□□ 1.94
TPM1-204ENST00000334895 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.19■■□□□ 1.94
TPM1-204ENST00000334895 CASZ1Q86V15 1759 aa27.18■■□□□ 1.94
TPM1-204ENST00000334895 ATP5J2-PTCD1G3V325 749 aa27.18■■□□□ 1.94
TPM1-204ENST00000334895 TRAPPC3LQ5T215 181 aa27.18■■□□□ 1.94
TPM1-204ENST00000334895 NEURL1BA8MQ27 555 aa27.17■■□□□ 1.94
TPM1-204ENST00000334895 ALDH1L1O75891 902 aa27.17■■□□□ 1.94
TPM1-204ENST00000334895 ADRA2BP18089 450 aa27.17■■□□□ 1.94
TPM1-204ENST00000334895 SSFA2P28290 1259 aa27.17■■□□□ 1.94
TPM1-204ENST00000334895 NEXNQ0ZGT2 675 aa27.17■■□□□ 1.94
TPM1-204ENST00000334895 TCIRG1Q13488 830 aa27.17■■□□□ 1.94
TPM1-204ENST00000334895 SRP68Q9UHB9 627 aaKnown RBP27.17■■□□□ 1.94
TPM1-204ENST00000334895 NARFQ9UHQ1 456 aa27.17■■□□□ 1.94
TPM1-204ENST00000334895 MEIS3Q99687 375 aa27.16■■□□□ 1.94
TPM1-204ENST00000334895 ISCA1Q9BUE6 129 aa27.16■■□□□ 1.94
TPM1-204ENST00000334895 ERICH6BQ5W0A0 696 aa27.16■■□□□ 1.94
TPM1-204ENST00000334895 BCL2L12Q9HB09 334 aa27.16■■□□□ 1.94
TPM1-204ENST00000334895 ZBTB40Q9NUA8 1239 aa27.16■■□□□ 1.94
TPM1-204ENST00000334895 IBTKQ9P2D0 1353 aaPredicted RBP27.15■■□□□ 1.94
TPM1-204ENST00000334895 USP44Q9H0E7 712 aa27.15■■□□□ 1.94
TPM1-204ENST00000334895 TFCP2L1Q9NZI6 479 aa27.15■■□□□ 1.94
TPM1-204ENST00000334895 USP42Q9H9J4 1324 aaKnown RBP27.14■■□□□ 1.94
TPM1-204ENST00000334895 USPL1Q5W0Q7 1092 aa27.13■■□□□ 1.93
TPM1-204ENST00000334895 RFC4P35249 363 aa27.12■■□□□ 1.93
TPM1-204ENST00000334895 GCKRQ14397 625 aa27.12■■□□□ 1.93
TPM1-204ENST00000334895 TRIM28Q13263 835 aaKnown RBP27.12■■□□□ 1.93
TPM1-204ENST00000334895 HSP90AB3PQ58FF7 597 aa27.12■■□□□ 1.93
TPM1-204ENST00000334895 ZNF34Q8IZ26 560 aa27.12■■□□□ 1.93
TPM1-204ENST00000334895 PDGFDQ9GZP0 370 aaPredicted RBP27.12■■□□□ 1.93
TPM1-204ENST00000334895 RGL2O15211 777 aa27.11■■□□□ 1.93
TPM1-204ENST00000334895 GPTP24298 496 aa27.11■■□□□ 1.93
TPM1-204ENST00000334895 UBN2Q6ZU65 1347 aa27.1■■□□□ 1.93
TPM1-204ENST00000334895 PNPLA7Q6ZV29 1317 aa27.1■■□□□ 1.93
TPM1-204ENST00000334895 ZPR1O75312 459 aa27.1■■□□□ 1.93
TPM1-204ENST00000334895 CLEC4GQ6UXB4 293 aa27.1■■□□□ 1.93
TPM1-204ENST00000334895 COL23A1Q86Y22 540 aaPredicted RBP27.1■■□□□ 1.93
TPM1-204ENST00000334895 NBPF7P0C2Y1 421 aaPredicted RBP27.09■■□□□ 1.93
TPM1-204ENST00000334895 CCDC191Q8NCU4 936 aa27.09■■□□□ 1.93
TPM1-204ENST00000334895 UTYO14607 1347 aa27.09■■□□□ 1.93
TPM1-204ENST00000334895 NLRP10Q86W26 655 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms