RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 TTC22Q5TAA0 569 aa11.09□□□□□ -0.63
TREM1-202ENST00000334475 SLC4A10Q6U841 1118 aa11.09□□□□□ -0.63
TREM1-202ENST00000334475 PLEKHM2Q8IWE5 1019 aa11.09□□□□□ -0.63
TREM1-202ENST00000334475 OSBPL3Q9H4L5 887 aa11.09□□□□□ -0.63
TREM1-202ENST00000334475 CASZ1Q86V15 1759 aa11.08□□□□□ -0.64
TREM1-202ENST00000334475 F6X3S4 739 aa11.08□□□□□ -0.64
TREM1-202ENST00000334475 TATP17735 454 aaPredicted RBP11.08□□□□□ -0.64
TREM1-202ENST00000334475 ATP8B2P98198 1209 aa11.08□□□□□ -0.64
TREM1-202ENST00000334475 NBR1Q14596 966 aa11.08□□□□□ -0.64
TREM1-202ENST00000334475 RAPGEF4Q8WZA2 1011 aa11.08□□□□□ -0.64
TREM1-202ENST00000334475 LGR6Q9HBX8 967 aa11.08□□□□□ -0.64
TREM1-202ENST00000334475 SPG7Q9UQ90 795 aa11.08□□□□□ -0.64
TREM1-202ENST00000334475 HDAC5Q9UQL6 1122 aa11.08□□□□□ -0.64
TREM1-202ENST00000334475 BARGINQ6ZT62 677 aa11.07□□□□□ -0.64
TREM1-202ENST00000334475 SNX21Q969T3 373 aa11.07□□□□□ -0.64
TREM1-202ENST00000334475 SRCIN1Q9C0H9 1055 aa11.07□□□□□ -0.64
TREM1-202ENST00000334475 DBF4Q9UBU7 674 aaPredicted RBP11.07□□□□□ -0.64
TREM1-202ENST00000334475 AXIN2Q9Y2T1 843 aa11.07□□□□□ -0.64
TREM1-202ENST00000334475 C5P01031 1676 aa11.07□□□□□ -0.64
TREM1-202ENST00000334475 SBF2Q86WG5 1849 aa11.07□□□□□ -0.64
TREM1-202ENST00000334475 HSP90AB1P08238 724 aaKnown RBP11.06□□□□□ -0.64
TREM1-202ENST00000334475 UBTFL1P0CB47 393 aaPredicted RBP11.06□□□□□ -0.64
TREM1-202ENST00000334475 CASC1Q6TDU7 716 aa11.06□□□□□ -0.64
TREM1-202ENST00000334475 MPRIPQ6WCQ1 1025 aa11.06□□□□□ -0.64
TREM1-202ENST00000334475 AOX1Q06278 1338 aa11.06□□□□□ -0.64
TREM1-202ENST00000334475 MEGF6O75095 1541 aa11.05□□□□□ -0.64
TREM1-202ENST00000334475 KDM6AO15550 1401 aaPredicted RBP11.05□□□□□ -0.64
TREM1-202ENST00000334475 KCNQ2O43526 872 aa11.05□□□□□ -0.64
TREM1-202ENST00000334475 ALDH1L1O75891 902 aa11.05□□□□□ -0.64
TREM1-202ENST00000334475 GSPT1P15170 499 aaKnown RBP11.05□□□□□ -0.64
TREM1-202ENST00000334475 SLC4A3P48751 1232 aa11.05□□□□□ -0.64
TREM1-202ENST00000334475 TBC1D9Q6ZT07 1266 aa11.05□□□□□ -0.64
TREM1-202ENST00000334475 HSCBQ8IWL3 235 aa11.05□□□□□ -0.64
TREM1-202ENST00000334475 IFNL2Q8IZJ0 200 aa11.05□□□□□ -0.64
TREM1-202ENST00000334475 DNAAF4Q8WXU2 420 aa11.05□□□□□ -0.64
TREM1-202ENST00000334475 TBC1D2Q9BYX2 928 aa11.05□□□□□ -0.64
TREM1-202ENST00000334475 AK9Q5TCS8 1911 aa11.05□□□□□ -0.64
TREM1-202ENST00000334475 RAB11FIP3O75154 756 aa11.04□□□□□ -0.64
TREM1-202ENST00000334475 GIGYF1O75420 1035 aaPredicted RBP11.04□□□□□ -0.64
TREM1-202ENST00000334475 PTGER2P43116 358 aa11.04□□□□□ -0.64
TREM1-202ENST00000334475 NFKBIBQ15653 356 aa11.04□□□□□ -0.64
TREM1-202ENST00000334475 SSH3Q8TE77 659 aa11.04□□□□□ -0.64
TREM1-202ENST00000334475 LRRCC1Q9C099 1032 aa11.04□□□□□ -0.64
TREM1-202ENST00000334475 USP44Q9H0E7 712 aa11.04□□□□□ -0.64
TREM1-202ENST00000334475 HYPKQ9NX55 129 aa11.04□□□□□ -0.64
TREM1-202ENST00000334475 CHPF2Q9P2E5 772 aa11.04□□□□□ -0.64
TREM1-202ENST00000334475 COL5A2P05997 1499 aaPredicted RBP11.04□□□□□ -0.64
TREM1-202ENST00000334475 SALL3Q9BXA9 1300 aa11.04□□□□□ -0.64
TREM1-202ENST00000334475 UBR2Q8IWV8 1755 aa11.03□□□□□ -0.64
TREM1-202ENST00000334475 PAPPAQ13219 1627 aa11.03□□□□□ -0.64
TREM1-202ENST00000334475 DDX58O95786 925 aaKnown RBP11.03□□□□□ -0.64
TREM1-202ENST00000334475 PHKG2P15735 406 aa11.03□□□□□ -0.64
TREM1-202ENST00000334475 EIF2S2P20042 333 aaKnown RBP11.03□□□□□ -0.64
TREM1-202ENST00000334475 HSP90AB4PQ58FF6 505 aa11.03□□□□□ -0.64
TREM1-202ENST00000334475 BEND3Q5T5X7 828 aa11.03□□□□□ -0.64
TREM1-202ENST00000334475 PHAXQ9H814 394 aaKnown RBP11.03□□□□□ -0.64
TREM1-202ENST00000334475 SLC52A2Q9HAB3 445 aa11.03□□□□□ -0.64
TREM1-202ENST00000334475 NLRP2Q9NX02 1062 aa11.03□□□□□ -0.64
TREM1-202ENST00000334475 LRRFIP2Q9Y608 721 aaKnown RBP11.03□□□□□ -0.64
TREM1-202ENST00000334475 ADCY9O60503 1353 aa11.03□□□□□ -0.64
TREM1-202ENST00000334475 EPB41L2O43491 1005 aaKnown RBP11.02□□□□□ -0.65
TREM1-202ENST00000334475 CSB-PGBD3P0DP91 1061 aa11.02□□□□□ -0.65
TREM1-202ENST00000334475 EVA1CP58658 441 aa11.02□□□□□ -0.65
TREM1-202ENST00000334475 MTX1Q13505 466 aa11.02□□□□□ -0.65
TREM1-202ENST00000334475 KSR2Q6VAB6 950 aa11.02□□□□□ -0.65
TREM1-202ENST00000334475 IL27Q8NEV9 243 aa11.02□□□□□ -0.65
TREM1-202ENST00000334475 NECTIN2Q92692 538 aa11.02□□□□□ -0.65
TREM1-202ENST00000334475 DCAF5Q96JK2 942 aa11.02□□□□□ -0.65
TREM1-202ENST00000334475 ANTXR1Q9H6X2 564 aa11.02□□□□□ -0.65
TREM1-202ENST00000334475 DDX21Q9NR30 783 aaKnown RBP eCLIP11.02□□□□□ -0.65
TREM1-202ENST00000334475 SHANK3Q9BYB0 1731 aa11.01□□□□□ -0.65
TREM1-202ENST00000334475 KCNQ3O43525 872 aa11.01□□□□□ -0.65
TREM1-202ENST00000334475 ZBTB7AO95365 584 aa11.01□□□□□ -0.65
TREM1-202ENST00000334475 PDE1AP54750 535 aa11.01□□□□□ -0.65
TREM1-202ENST00000334475 ZNF790Q6PG37 636 aa11.01□□□□□ -0.65
TREM1-202ENST00000334475 MARCH10Q8NA82 808 aaPredicted RBP11.01□□□□□ -0.65
TREM1-202ENST00000334475 PHF12Q96QT6 1004 aa11.01□□□□□ -0.65
TREM1-202ENST00000334475 SPON1Q9HCB6 807 aa11.01□□□□□ -0.65
TREM1-202ENST00000334475 STAP2Q9UGK3 403 aa11.01□□□□□ -0.65
TREM1-202ENST00000334475 WDR17Q8IZU2 1322 aa11.01□□□□□ -0.65
TREM1-202ENST00000334475 PI4KAP2A4QPH2 592 aa11□□□□□ -0.65
TREM1-202ENST00000334475 REC8O95072 547 aa11□□□□□ -0.65
TREM1-202ENST00000334475 SDSP20132 328 aa11□□□□□ -0.65
TREM1-202ENST00000334475 PI4KAP1Q8N8J0 262 aa11□□□□□ -0.65
TREM1-202ENST00000334475 TSPYL2Q9H2G4 693 aaPredicted RBP11□□□□□ -0.65
TREM1-202ENST00000334475 CHMP5Q9NZZ3 219 aa11□□□□□ -0.65
TREM1-202ENST00000334475 CIZ1Q9ULV3 898 aaPredicted RBP11□□□□□ -0.65
TREM1-202ENST00000334475 UTYO14607 1347 aa11□□□□□ -0.65
TREM1-202ENST00000334475 ERBB4Q15303 1308 aa11□□□□□ -0.65
TREM1-202ENST00000334475 ARFGEF2Q9Y6D5 1785 aa11□□□□□ -0.65
TREM1-202ENST00000334475 AFDNP55196 1824 aaKnown RBP11□□□□□ -0.65
TREM1-202ENST00000334475 PNMA6EA0A0J9YXQ4 647 aa10.99□□□□□ -0.65
TREM1-202ENST00000334475 SMARCA5O60264 1052 aaPredicted RBP10.99□□□□□ -0.65
TREM1-202ENST00000334475 MX1P20591 662 aa10.99□□□□□ -0.65
TREM1-202ENST00000334475 DEKP35659 375 aaKnown RBP10.99□□□□□ -0.65
TREM1-202ENST00000334475 VASPP50552 380 aaPredicted RBP10.99□□□□□ -0.65
TREM1-202ENST00000334475 RABEP1Q15276 862 aa10.99□□□□□ -0.65
TREM1-202ENST00000334475 C16orf71Q8IYS4 520 aaPredicted RBP10.99□□□□□ -0.65
TREM1-202ENST00000334475 ZNF784Q8NCA9 323 aaPredicted RBP10.99□□□□□ -0.65
TREM1-202ENST00000334475 LINS1Q8NG48 757 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms