RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 MCTP1Q6DN14 999 aa13.02□□□□□ -0.33
CCDC172-201ENST00000333254 ECHDC1Q9NTX5 307 aa13.02□□□□□ -0.33
CCDC172-201ENST00000333254 C9orf78Q9NZ63 289 aaPredicted RBP13.02□□□□□ -0.33
CCDC172-201ENST00000333254 CPDO75976 1380 aa13.02□□□□□ -0.33
CCDC172-201ENST00000333254 PAPPAQ13219 1627 aa13.01□□□□□ -0.33
CCDC172-201ENST00000333254 HIP1O00291 1037 aa13.01□□□□□ -0.33
CCDC172-201ENST00000333254 TTC14Q96N46 770 aa13.01□□□□□ -0.33
CCDC172-201ENST00000333254 PPP1R9BQ96SB3 815 aa13.01□□□□□ -0.33
CCDC172-201ENST00000333254 SLC52A2Q9HAB3 445 aa13.01□□□□□ -0.33
CCDC172-201ENST00000333254 SPG7Q9UQ90 795 aa13.01□□□□□ -0.33
CCDC172-201ENST00000333254 AXIN2Q9Y2T1 843 aa13.01□□□□□ -0.33
CCDC172-201ENST00000333254 MEGF6O75095 1541 aa13□□□□□ -0.33
CCDC172-201ENST00000333254 CLCN1P35523 988 aa13□□□□□ -0.33
CCDC172-201ENST00000333254 CCDC173Q0VFZ6 552 aa13□□□□□ -0.33
CCDC172-201ENST00000333254 PKP1Q13835 747 aa13□□□□□ -0.33
CCDC172-201ENST00000333254 PDIA6Q15084 440 aa13□□□□□ -0.33
CCDC172-201ENST00000333254 ZNF790Q6PG37 636 aa13□□□□□ -0.33
CCDC172-201ENST00000333254 LARP1Q6PKG0 1096 aaKnown RBP13□□□□□ -0.33
CCDC172-201ENST00000333254 RAPGEF4Q8WZA2 1011 aa13□□□□□ -0.33
CCDC172-201ENST00000333254 RBM33Q96EV2 1170 aaKnown RBP13□□□□□ -0.33
CCDC172-201ENST00000333254 TM6SF1Q9BZW5 370 aa13□□□□□ -0.33
CCDC172-201ENST00000333254 XIRP1Q702N8 1843 aaKnown RBP13□□□□□ -0.33
CCDC172-201ENST00000333254 NUP188Q5SRE5 1749 aa13□□□□□ -0.33
CCDC172-201ENST00000333254 RFX7Q2KHR2 1363 aa12.99□□□□□ -0.33
CCDC172-201ENST00000333254 TATP17735 454 aaPredicted RBP12.99□□□□□ -0.33
CCDC172-201ENST00000333254 PROSER3Q2NL68 480 aa12.99□□□□□ -0.33
CCDC172-201ENST00000333254 EVI5LQ96CN4 794 aa12.99□□□□□ -0.33
CCDC172-201ENST00000333254 TCHHQ07283 1943 aa12.99□□□□□ -0.33
CCDC172-201ENST00000333254 WDR33Q9C0J8 1336 aaKnown RBP12.99□□□□□ -0.33
CCDC172-201ENST00000333254 ZBTB7CA1YPR0 619 aa12.99□□□□□ -0.33
CCDC172-201ENST00000333254 PDIA4P13667 645 aaKnown RBP12.99□□□□□ -0.33
CCDC172-201ENST00000333254 PHKG2P15735 406 aa12.99□□□□□ -0.33
CCDC172-201ENST00000333254 KIAA1211Q6ZU35 1233 aa12.99□□□□□ -0.33
CCDC172-201ENST00000333254 IL25Q9H293 177 aa12.99□□□□□ -0.33
CCDC172-201ENST00000333254 SNX14Q9Y5W7 946 aa12.99□□□□□ -0.33
CCDC172-201ENST00000333254 JCADQ9P266 1359 aa12.98□□□□□ -0.33
CCDC172-201ENST00000333254 ERBB4Q15303 1308 aa12.98□□□□□ -0.33
CCDC172-201ENST00000333254 ANXA1P04083 346 aa12.98□□□□□ -0.33
CCDC172-201ENST00000333254 OS9Q13438 667 aaPredicted RBP12.98□□□□□ -0.33
CCDC172-201ENST00000333254 ZSCAN23Q3MJ62 389 aa12.98□□□□□ -0.33
CCDC172-201ENST00000333254 IFNL2Q8IZJ0 200 aa12.98□□□□□ -0.33
CCDC172-201ENST00000333254 TMEM87AQ8NBN3 555 aa12.98□□□□□ -0.33
CCDC172-201ENST00000333254 RRAGDQ9NQL2 400 aaPredicted RBP12.98□□□□□ -0.33
CCDC172-201ENST00000333254 NEXNQ0ZGT2 675 aa12.97□□□□□ -0.33
CCDC172-201ENST00000333254 KAZALD1Q96I82 304 aa12.97□□□□□ -0.33
CCDC172-201ENST00000333254 DCAF5Q96JK2 942 aa12.97□□□□□ -0.33
CCDC172-201ENST00000333254 METTL22Q9BUU2 404 aaPredicted RBP12.97□□□□□ -0.33
CCDC172-201ENST00000333254 DIAPH3Q9NSV4 1193 aa12.97□□□□□ -0.33
CCDC172-201ENST00000333254 IFIT2P09913 472 aaKnown RBP12.96□□□□□ -0.33
CCDC172-201ENST00000333254 NASPP49321 788 aaPredicted RBP12.96□□□□□ -0.33
CCDC172-201ENST00000333254 XPCQ01831 940 aaPredicted RBP12.96□□□□□ -0.33
CCDC172-201ENST00000333254 HS1BP3Q53T59 392 aa12.96□□□□□ -0.33
CCDC172-201ENST00000333254 LRP10Q7Z4F1 713 aa12.96□□□□□ -0.33
CCDC172-201ENST00000333254 TICAM2Q86XR7 235 aa12.96□□□□□ -0.33
CCDC172-201ENST00000333254 SUCLG2Q96I99 432 aa12.96□□□□□ -0.33
CCDC172-201ENST00000333254 ZSCAN31Q96LW9 406 aaPredicted RBP12.96□□□□□ -0.33
CCDC172-201ENST00000333254 SPEF2Q9C093 1822 aa12.96□□□□□ -0.33
CCDC172-201ENST00000333254 TMEM94Q12767 1356 aa12.96□□□□□ -0.33
CCDC172-201ENST00000333254 ABCA3Q99758 1704 aa12.96□□□□□ -0.34
CCDC172-201ENST00000333254 NEURL1BA8MQ27 555 aa12.96□□□□□ -0.34
CCDC172-201ENST00000333254 IGKV5-2P06315 115 aa12.96□□□□□ -0.34
CCDC172-201ENST00000333254 ATF3P18847 181 aa12.96□□□□□ -0.34
CCDC172-201ENST00000333254 G3BP1Q13283 466 aaKnown RBP eCLIP12.96□□□□□ -0.34
CCDC172-201ENST00000333254 CWF19L2Q2TBE0 894 aaKnown RBP12.96□□□□□ -0.34
CCDC172-201ENST00000333254 VPS53Q5VIR6 699 aa12.96□□□□□ -0.34
CCDC172-201ENST00000333254 GPT2Q8TD30 523 aa12.96□□□□□ -0.34
CCDC172-201ENST00000333254 ANP32BQ92688 251 aaKnown RBP12.96□□□□□ -0.34
CCDC172-201ENST00000333254 LIMCH1Q9UPQ0 1083 aa12.96□□□□□ -0.34
CCDC172-201ENST00000333254 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.96□□□□□ -0.34
CCDC172-201ENST00000333254 TJP1Q07157 1748 aa12.95□□□□□ -0.34
CCDC172-201ENST00000333254 SHANK3Q9BYB0 1731 aa12.95□□□□□ -0.34
CCDC172-201ENST00000333254 PRPF40AO75400 957 aaKnown RBP12.95□□□□□ -0.34
CCDC172-201ENST00000333254 SASH1O94885 1247 aa12.95□□□□□ -0.34
CCDC172-201ENST00000333254 SNRPA1P09661 255 aaKnown RBP12.95□□□□□ -0.34
CCDC172-201ENST00000333254 CAVIN1Q6NZI2 390 aaKnown RBP12.95□□□□□ -0.34
CCDC172-201ENST00000333254 CADPS2Q86UW7 1296 aa12.95□□□□□ -0.34
CCDC172-201ENST00000333254 SYAP1Q96A49 352 aaPredicted RBP12.95□□□□□ -0.34
CCDC172-201ENST00000333254 BICC1Q9H694 974 aaKnown RBP12.95□□□□□ -0.34
CCDC172-201ENST00000333254 COPRSQ9NQ92 184 aa12.95□□□□□ -0.34
CCDC172-201ENST00000333254 SH2B1Q9NRF2 756 aaPredicted RBP12.95□□□□□ -0.34
CCDC172-201ENST00000333254 RPAP1Q9BWH6 1393 aaPredicted RBP12.95□□□□□ -0.34
CCDC172-201ENST00000333254 CCDC171Q6TFL3 1326 aa12.94□□□□□ -0.34
CCDC172-201ENST00000333254 ESPNB1AK53 854 aa12.94□□□□□ -0.34
CCDC172-201ENST00000333254 GCKRQ14397 625 aa12.94□□□□□ -0.34
CCDC172-201ENST00000333254 RABL6Q3YEC7 729 aaPredicted RBP12.94□□□□□ -0.34
CCDC172-201ENST00000333254 LMOD2Q6P5Q4 547 aa12.94□□□□□ -0.34
CCDC172-201ENST00000333254 LRSAM1Q6UWE0 723 aa12.94□□□□□ -0.34
CCDC172-201ENST00000333254 RIC3Q7Z5B4 369 aa12.94□□□□□ -0.34
CCDC172-201ENST00000333254 UPF3BQ9BZI7 483 aaKnown RBP12.94□□□□□ -0.34
CCDC172-201ENST00000333254 ALDH8A1Q9H2A2 487 aaPredicted RBP12.94□□□□□ -0.34
CCDC172-201ENST00000333254 ZSWIM6Q9HCJ5 1215 aa12.94□□□□□ -0.34
CCDC172-201ENST00000333254 MED23Q9ULK4 1368 aa12.94□□□□□ -0.34
CCDC172-201ENST00000333254 SPATA31A3Q5VYP0 1347 aa12.94□□□□□ -0.34
CCDC172-201ENST00000333254 PRAMEF22A3QJZ6 481 aa12.93□□□□□ -0.34
CCDC172-201ENST00000333254 NECTIN1Q15223 517 aa12.93□□□□□ -0.34
CCDC172-201ENST00000333254 PPP4R3CPQ6ZMV5 832 aa12.93□□□□□ -0.34
CCDC172-201ENST00000333254 AACSQ86V21 672 aa12.93□□□□□ -0.34
CCDC172-201ENST00000333254 TRIM44Q96DX7 344 aaPredicted RBP12.93□□□□□ -0.34
CCDC172-201ENST00000333254 PDLIM2Q96JY6 352 aa12.93□□□□□ -0.34
CCDC172-201ENST00000333254 AK2P54819 239 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms