RNA–Protein interactions for RNA: ENST00000332772.4

SIMC1-201, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-201ENST00000332772 VSIG10Q8N0Z9 540 aa11.12□□□□□ -0.63
SIMC1-201ENST00000332772 CDCA7Q9BWT1 371 aaPredicted RBP11.12□□□□□ -0.63
SIMC1-201ENST00000332772 TEX13AQ9BXU3 409 aaPredicted RBP11.12□□□□□ -0.63
SIMC1-201ENST00000332772 EXOC6BQ9Y2D4 811 aa11.12□□□□□ -0.63
SIMC1-201ENST00000332772 COL16A1Q07092 1604 aaPredicted RBP11.12□□□□□ -0.63
SIMC1-201ENST00000332772 ARFGEF2Q9Y6D5 1785 aa11.12□□□□□ -0.63
SIMC1-201ENST00000332772 SMARCA5O60264 1052 aaPredicted RBP11.12□□□□□ -0.63
SIMC1-201ENST00000332772 ANXA1P04083 346 aa11.12□□□□□ -0.63
SIMC1-201ENST00000332772 SDSP20132 328 aa11.12□□□□□ -0.63
SIMC1-201ENST00000332772 PLBD2Q8NHP8 589 aa11.12□□□□□ -0.63
SIMC1-201ENST00000332772 USP42Q9H9J4 1324 aaKnown RBP11.12□□□□□ -0.63
SIMC1-201ENST00000332772 SURF6O75683 361 aaKnown RBP11.11□□□□□ -0.63
SIMC1-201ENST00000332772 REC8O95072 547 aa11.11□□□□□ -0.63
SIMC1-201ENST00000332772 COPS6Q7L5N1 327 aa11.11□□□□□ -0.63
SIMC1-201ENST00000332772 RHPN1Q8TCX5 695 aa11.11□□□□□ -0.63
SIMC1-201ENST00000332772 XAGE3Q8WTP9 111 aa11.11□□□□□ -0.63
SIMC1-201ENST00000332772 USP16Q9Y5T5 823 aa11.11□□□□□ -0.63
SIMC1-201ENST00000332772 TOGARAM1Q9Y4F4 1720 aa11.11□□□□□ -0.63
SIMC1-201ENST00000332772 NEURL1BA8MQ27 555 aa11.1□□□□□ -0.63
SIMC1-201ENST00000332772 TBC1D2Q9BYX2 928 aa11.1□□□□□ -0.63
SIMC1-201ENST00000332772 THRAP3Q9Y2W1 955 aaKnown RBP11.1□□□□□ -0.63
SIMC1-201ENST00000332772 TTC41PQ6P2S7 1318 aa11.1□□□□□ -0.63
SIMC1-201ENST00000332772 PHLPP1O60346 1717 aa11.1□□□□□ -0.63
SIMC1-201ENST00000332772 AFDNP55196 1824 aaKnown RBP11.1□□□□□ -0.63
SIMC1-201ENST00000332772 IGKV5-2P06315 115 aa11.1□□□□□ -0.63
SIMC1-201ENST00000332772 GCKRQ14397 625 aa11.1□□□□□ -0.63
SIMC1-201ENST00000332772 NUP188Q5SRE5 1749 aa11.1□□□□□ -0.63
SIMC1-201ENST00000332772 OTUD7AQ8TE49 926 aaPredicted RBP11.1□□□□□ -0.63
SIMC1-201ENST00000332772 STRN4Q9NRL3 753 aa11.1□□□□□ -0.63
SIMC1-201ENST00000332772 BTG4Q9NY30 223 aa11.1□□□□□ -0.63
SIMC1-201ENST00000332772 ITGB4P16144 1822 aa11.09□□□□□ -0.63
SIMC1-201ENST00000332772 NWD2Q9ULI1 1742 aa11.09□□□□□ -0.63
SIMC1-201ENST00000332772 ERC2O15083 957 aa11.08□□□□□ -0.64
SIMC1-201ENST00000332772 CWF19L2Q2TBE0 894 aaKnown RBP11.08□□□□□ -0.64
SIMC1-201ENST00000332772 HSCBQ8IWL3 235 aa11.08□□□□□ -0.64
SIMC1-201ENST00000332772 USP26Q9BXU7 913 aa11.08□□□□□ -0.64
SIMC1-201ENST00000332772 TMOD3Q9NYL9 352 aa11.08□□□□□ -0.64
SIMC1-201ENST00000332772 NRAPQ86VF7 1730 aa11.08□□□□□ -0.64
SIMC1-201ENST00000332772 AK9Q5TCS8 1911 aa11.08□□□□□ -0.64
SIMC1-201ENST00000332772 APBB1O00213 710 aa11.08□□□□□ -0.64
SIMC1-201ENST00000332772 MYL6BP14649 208 aa11.08□□□□□ -0.64
SIMC1-201ENST00000332772 AIMP1Q12904 312 aaKnown RBP11.08□□□□□ -0.64
SIMC1-201ENST00000332772 RTL5Q5HYW3 569 aaPredicted RBP11.08□□□□□ -0.64
SIMC1-201ENST00000332772 CLASRPQ8N2M8 674 aaKnown RBP11.08□□□□□ -0.64
SIMC1-201ENST00000332772 SLC4A3P48751 1232 aa11.07□□□□□ -0.64
SIMC1-201ENST00000332772 RABEP1Q15276 862 aa11.07□□□□□ -0.64
SIMC1-201ENST00000332772 RABL6Q3YEC7 729 aaPredicted RBP11.07□□□□□ -0.64
SIMC1-201ENST00000332772 DDX54Q8TDD1 881 aaKnown RBP11.07□□□□□ -0.64
SIMC1-201ENST00000332772 IL17RAQ96F46 866 aa11.07□□□□□ -0.64
SIMC1-201ENST00000332772 KAZALD1Q96I82 304 aa11.07□□□□□ -0.64
SIMC1-201ENST00000332772 SUCLG2Q96I99 432 aa11.07□□□□□ -0.64
SIMC1-201ENST00000332772 KIF2CQ99661 725 aa11.07□□□□□ -0.64
SIMC1-201ENST00000332772 ANTXR1Q9H6X2 564 aa11.07□□□□□ -0.64
SIMC1-201ENST00000332772 GPATCH3Q96I76 525 aa11.06□□□□□ -0.64
SIMC1-201ENST00000332772 MYD88Q99836 296 aa11.06□□□□□ -0.64
SIMC1-201ENST00000332772 EXOC5O00471 708 aa11.06□□□□□ -0.64
SIMC1-201ENST00000332772 TOM1O60784 492 aa11.06□□□□□ -0.64
SIMC1-201ENST00000332772 GLRX3O76003 335 aaKnown RBP11.06□□□□□ -0.64
SIMC1-201ENST00000332772 COPRSQ9NQ92 184 aa11.06□□□□□ -0.64
SIMC1-201ENST00000332772 BCL9O00512 1426 aa11.06□□□□□ -0.64
SIMC1-201ENST00000332772 NBPF26B4DH59 902 aa11.05□□□□□ -0.64
SIMC1-201ENST00000332772 ANAPC15P60006 121 aa11.05□□□□□ -0.64
SIMC1-201ENST00000332772 TRIM28Q13263 835 aaKnown RBP11.05□□□□□ -0.64
SIMC1-201ENST00000332772 G3BP1Q13283 466 aaKnown RBP eCLIP11.05□□□□□ -0.64
SIMC1-201ENST00000332772 NBPF14Q5TI25 921 aa11.05□□□□□ -0.64
SIMC1-201ENST00000332772 NBPF10Q6P3W6 841 aaKnown RBP11.05□□□□□ -0.64
SIMC1-201ENST00000332772 NBPF15Q8N660 670 aa11.05□□□□□ -0.64
SIMC1-201ENST00000332772 CCDC191Q8NCU4 936 aa11.05□□□□□ -0.64
SIMC1-201ENST00000332772 PI4K2BQ8TCG2 481 aa11.05□□□□□ -0.64
SIMC1-201ENST00000332772 BICC1Q9H694 974 aaKnown RBP11.05□□□□□ -0.64
SIMC1-201ENST00000332772 CICQ96RK0 1608 aaPredicted RBP11.05□□□□□ -0.64
SIMC1-201ENST00000332772 H7C1W4 665 aa11.04□□□□□ -0.64
SIMC1-201ENST00000332772 CHMLP26374 656 aa11.04□□□□□ -0.64
SIMC1-201ENST00000332772 FXR2P51116 673 aaKnown RBP eCLIP11.04□□□□□ -0.64
SIMC1-201ENST00000332772 CASP7P55210 303 aa11.04□□□□□ -0.64
SIMC1-201ENST00000332772 OS9Q13438 667 aaPredicted RBP11.04□□□□□ -0.64
SIMC1-201ENST00000332772 TICAM2Q86XR7 235 aa11.04□□□□□ -0.64
SIMC1-201ENST00000332772 CNTROBQ8N137 903 aa11.04□□□□□ -0.64
SIMC1-201ENST00000332772 ESYT1Q9BSJ8 1104 aa11.04□□□□□ -0.64
SIMC1-201ENST00000332772 CIZ1Q9ULV3 898 aaPredicted RBP11.04□□□□□ -0.64
SIMC1-201ENST00000332772 STARD3NLO95772 234 aa11.04□□□□□ -0.64
SIMC1-201ENST00000332772 IL1RAPL2Q9NP60 686 aa11.04□□□□□ -0.64
SIMC1-201ENST00000332772 ATG3Q9NT62 314 aa11.04□□□□□ -0.64
SIMC1-201ENST00000332772 ECHDC1Q9NTX5 307 aa11.04□□□□□ -0.64
SIMC1-201ENST00000332772 SPATA31A1Q5TZJ5 1347 aa11.03□□□□□ -0.64
SIMC1-201ENST00000332772 MCCP23508 829 aa11.03□□□□□ -0.64
SIMC1-201ENST00000332772 NFKBIBQ15653 356 aa11.03□□□□□ -0.64
SIMC1-201ENST00000332772 PIGBQ92521 554 aa11.03□□□□□ -0.64
SIMC1-201ENST00000332772 CWC25Q9NXE8 425 aaPredicted RBP11.03□□□□□ -0.64
SIMC1-201ENST00000332772 CHMP5Q9NZZ3 219 aa11.03□□□□□ -0.64
SIMC1-201ENST00000332772 TJP1Q07157 1748 aa11.03□□□□□ -0.64
SIMC1-201ENST00000332772 SLIT2O94813 1529 aa11.02□□□□□ -0.64
SIMC1-201ENST00000332772 TRIM6-TRIM34B2RNG4 842 aa11.02□□□□□ -0.64
SIMC1-201ENST00000332772 IFIT2P09913 472 aaKnown RBP11.02□□□□□ -0.64
SIMC1-201ENST00000332772 BARGINQ6ZT62 677 aa11.02□□□□□ -0.64
SIMC1-201ENST00000332772 A0A087WZG4 1122 aa11.02□□□□□ -0.65
SIMC1-201ENST00000332772 K7ELQ4 463 aaPredicted RBP11.02□□□□□ -0.65
SIMC1-201ENST00000332772 HIP1O00291 1037 aa11.02□□□□□ -0.65
SIMC1-201ENST00000332772 RFX5P48382 616 aaPredicted RBP11.02□□□□□ -0.65
SIMC1-201ENST00000332772 NBR1Q14596 966 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms