RNA–Protein interactions for RNA: ENST00000332687.10

RLIM-201, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RLIM, Length 8,317 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-201ENST00000332687 AACSQ86V21 672 aa5.77□□□□□ -1.49
RLIM-201ENST00000332687 RBM17Q96I25 401 aaKnown RBP5.77□□□□□ -1.49
RLIM-201ENST00000332687 RBM19Q9Y4C8 960 aaKnown RBP5.77□□□□□ -1.49
RLIM-201ENST00000332687 MYO5CQ9NQX4 1742 aa5.77□□□□□ -1.49
RLIM-201ENST00000332687 ZFYVE9O95405 1425 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 SRGAP3O43295 1099 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 ZC3H6P61129 1189 aaKnown RBP5.76□□□□□ -1.49
RLIM-201ENST00000332687 KIF22Q14807 665 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 IFI16Q16666 785 aaKnown RBP5.76□□□□□ -1.49
RLIM-201ENST00000332687 CCDC181Q5TID7 509 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 CAVIN2O95810 425 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 NBPF7P0C2Y1 421 aaPredicted RBP5.76□□□□□ -1.49
RLIM-201ENST00000332687 PARP10Q53GL7 1025 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 MCTP2Q6DN12 878 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 SPATA32Q96LK8 384 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 CCDC87Q9NVE4 849 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 RNF216Q9NWF9 866 aaPredicted RBP5.76□□□□□ -1.49
RLIM-201ENST00000332687 ORC3Q9UBD5 711 aaPredicted RBP5.76□□□□□ -1.49
RLIM-201ENST00000332687 ELMSAN1Q6PJG2 1045 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 ZNF622Q969S3 477 aaKnown RBP eCLIP5.76□□□□□ -1.492e-6■■■□□ 14.9
RLIM-201ENST00000332687 KRT23Q9C075 422 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 NAIPQ13075 1403 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 EIF3DO15371 548 aaKnown RBP eCLIP5.76□□□□□ -1.49
RLIM-201ENST00000332687 CALM1P0DP23 149 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 CALM2P0DP24 149 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 CALM3P0DP25 149 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 GABPB2Q8TAK5 448 aaPredicted RBP5.76□□□□□ -1.49
RLIM-201ENST00000332687 CCDC97Q96F63 343 aaPredicted RBP5.76□□□□□ -1.49
RLIM-201ENST00000332687 SPC25Q9HBM1 224 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 TCP11L1Q9NUJ3 509 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 ABCF2Q9UG63 623 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 PCDH11XQ9BZA7 1347 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 PCDH11YQ9BZA8 1340 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 SHANK2Q9UPX8 1470 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 PRC1O43663 620 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 CCDC192P0DO97 292 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 WDR78Q5VTH9 848 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 CCDC83Q8IWF9 413 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 ZC3H12CQ9C0D7 883 aaKnown RBP5.76□□□□□ -1.49
RLIM-201ENST00000332687 IL2RBP14784 551 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 TAF4BQ92750 862 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 RIMS2Q9UQ26 1411 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 ZNF644Q9H582 1327 aaPredicted RBP5.76□□□□□ -1.49
RLIM-201ENST00000332687 TCIRG1Q13488 830 aa5.76□□□□□ -1.49
RLIM-201ENST00000332687 CIZ1Q9ULV3 898 aaPredicted RBP5.76□□□□□ -1.49
RLIM-201ENST00000332687 WDR62O43379 1518 aa5.75□□□□□ -1.49
RLIM-201ENST00000332687 ERLIN1O75477 346 aa5.75□□□□□ -1.49
RLIM-201ENST00000332687 IDH1O75874 414 aaKnown RBP5.75□□□□□ -1.49
RLIM-201ENST00000332687 PRPHP41219 470 aa5.75□□□□□ -1.49
RLIM-201ENST00000332687 DPY19L2Q6NUT2 758 aa5.75□□□□□ -1.49
RLIM-201ENST00000332687 RTEL1Q9NZ71 1219 aa5.75□□□□□ -1.49
RLIM-201ENST00000332687 ABCC2Q92887 1545 aa5.75□□□□□ -1.49
RLIM-201ENST00000332687 MPRIPQ6WCQ1 1025 aa5.75□□□□□ -1.49
RLIM-201ENST00000332687 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.75□□□□□ -1.49
RLIM-201ENST00000332687 ARAP1Q96P48 1450 aa5.75□□□□□ -1.49
RLIM-201ENST00000332687 NUP133Q8WUM0 1156 aa5.75□□□□□ -1.49
RLIM-201ENST00000332687 LRRFIP2Q9Y608 721 aaKnown RBP5.75□□□□□ -1.49
RLIM-201ENST00000332687 ADAMTS12P58397 1594 aa5.75□□□□□ -1.49
RLIM-201ENST00000332687 CCDC194A0A1B0GVG4 234 aa5.75□□□□□ -1.49
RLIM-201ENST00000332687 TANGO6Q9C0B7 1094 aa5.75□□□□□ -1.49
RLIM-201ENST00000332687 ZHX3Q9H4I2 956 aa5.75□□□□□ -1.49
RLIM-201ENST00000332687 GOLIM4O00461 696 aa5.75□□□□□ -1.49
RLIM-201ENST00000332687 ALDH1B1P30837 517 aa5.75□□□□□ -1.49
RLIM-201ENST00000332687 TNFAIP1Q13829 316 aa5.75□□□□□ -1.49
RLIM-201ENST00000332687 TRIM5Q9C035 493 aa5.75□□□□□ -1.49
RLIM-201ENST00000332687 CNGA1P29973 690 aa5.75□□□□□ -1.49
RLIM-201ENST00000332687 CCDC174Q6PII3 467 aa5.75□□□□□ -1.49
RLIM-201ENST00000332687 PPM1EQ8WY54 764 aa5.75□□□□□ -1.49
RLIM-201ENST00000332687 RSPH6AQ9H0K4 717 aa5.75□□□□□ -1.49
RLIM-201ENST00000332687 GBP3Q9H0R5 595 aa5.75□□□□□ -1.49
RLIM-201ENST00000332687 TBX22Q9Y458 520 aa5.75□□□□□ -1.49
RLIM-201ENST00000332687 MAGI2Q86UL8 1455 aa5.75□□□□□ -1.49
RLIM-201ENST00000332687 ZNF213O14771 459 aa5.74□□□□□ -1.49
RLIM-201ENST00000332687 SLU7O95391 586 aaKnown RBP5.74□□□□□ -1.49
RLIM-201ENST00000332687 PPP1R2P41236 205 aa5.74□□□□□ -1.49
RLIM-201ENST00000332687 PIK3C2GO75747 1445 aa5.74□□□□□ -1.49
RLIM-201ENST00000332687 EIF3JO75822 258 aaKnown RBP5.74□□□□□ -1.49
RLIM-201ENST00000332687 KAT14Q9H8E8 782 aa5.74□□□□□ -1.49
RLIM-201ENST00000332687 RMND1Q9NWS8 449 aa5.74□□□□□ -1.49
RLIM-201ENST00000332687 CDK13Q14004 1512 aaKnown RBP5.74□□□□□ -1.49
RLIM-201ENST00000332687 RFX1P22670 979 aa5.74□□□□□ -1.49
RLIM-201ENST00000332687 CALML3P27482 149 aa5.74□□□□□ -1.49
RLIM-201ENST00000332687 PPM1FP49593 454 aaPredicted RBP5.74□□□□□ -1.49
RLIM-201ENST00000332687 TSNARE1Q96NA8 513 aa5.74□□□□□ -1.49
RLIM-201ENST00000332687 CCDC94Q9BW85 323 aaPredicted RBP5.74□□□□□ -1.49
RLIM-201ENST00000332687 PICK1Q9NRD5 415 aa5.74□□□□□ -1.49
RLIM-201ENST00000332687 SLC12A7Q9Y666 1083 aa5.74□□□□□ -1.49
RLIM-201ENST00000332687 GOLGA6L10A0A0M3HER8 536 aa5.74□□□□□ -1.49
RLIM-201ENST00000332687 STX6O43752 255 aa5.74□□□□□ -1.49
RLIM-201ENST00000332687 CCDC14Q49A88 953 aa5.74□□□□□ -1.49
RLIM-201ENST00000332687 BICDL1Q6ZP65 573 aa5.74□□□□□ -1.49
RLIM-201ENST00000332687 TMC4Q7Z404 712 aa5.74□□□□□ -1.49
RLIM-201ENST00000332687 CDAN1Q8IWY9 1227 aa5.74□□□□□ -1.49
RLIM-201ENST00000332687 DNAAF4Q8WXU2 420 aa5.74□□□□□ -1.49
RLIM-201ENST00000332687 IMPG2Q9BZV3 1241 aa5.74□□□□□ -1.49
RLIM-201ENST00000332687 RUSC2Q8N2Y8 1516 aa5.74□□□□□ -1.49
RLIM-201ENST00000332687 MAP7D2Q96T17 732 aa5.74□□□□□ -1.49
RLIM-201ENST00000332687 LNPKQ9C0E8 428 aa5.74□□□□□ -1.49
RLIM-201ENST00000332687 SSRP1Q08945 709 aaKnown RBP5.74□□□□□ -1.49
RLIM-201ENST00000332687 EVI5LQ96CN4 794 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 182.5 ms