RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 NDUFB9Q9Y6M9 179 aa23.05■■□□□ 1.28
LAMP1-201ENST00000332556 MED1Q15648 1581 aaPredicted RBP23.05■■□□□ 1.28
LAMP1-201ENST00000332556 USP54Q70EL1 1684 aa23.05■■□□□ 1.28
LAMP1-201ENST00000332556 KDM3BQ7LBC6 1761 aa23.05■■□□□ 1.28
LAMP1-201ENST00000332556 TPM2P07951 284 aa23.05■■□□□ 1.28
LAMP1-201ENST00000332556 ZNF496Q96IT1 587 aaPredicted RBP23.05■■□□□ 1.28
LAMP1-201ENST00000332556 CACNA1FO60840 1977 aa23.05■■□□□ 1.28
LAMP1-201ENST00000332556 C1orf167Q5SNV9 1468 aa23.05■■□□□ 1.28
LAMP1-201ENST00000332556 MCCP23508 829 aa23.05■■□□□ 1.28
LAMP1-201ENST00000332556 COL9A3Q14050 684 aaPredicted RBP23.05■■□□□ 1.28
LAMP1-201ENST00000332556 AACSQ86V21 672 aa23.05■■□□□ 1.28
LAMP1-201ENST00000332556 PXDNLA1KZ92 1463 aa23.04■■□□□ 1.28
LAMP1-201ENST00000332556 RAB11FIP3O75154 756 aa23.04■■□□□ 1.28
LAMP1-201ENST00000332556 ZNF790Q6PG37 636 aa23.04■■□□□ 1.28
LAMP1-201ENST00000332556 XAGE3Q8WTP9 111 aa23.04■■□□□ 1.28
LAMP1-201ENST00000332556 C19orf44Q9H6X5 657 aa23.04■■□□□ 1.28
LAMP1-201ENST00000332556 ATF3P18847 181 aa23.04■■□□□ 1.28
LAMP1-201ENST00000332556 RBM10P98175 930 aaKnown RBP23.04■■□□□ 1.28
LAMP1-201ENST00000332556 COPS6Q7L5N1 327 aa23.04■■□□□ 1.28
LAMP1-201ENST00000332556 IGKV5-2P06315 115 aa23.03■■□□□ 1.28
LAMP1-201ENST00000332556 EPHA10Q5JZY3 1008 aa23.03■■□□□ 1.28
LAMP1-201ENST00000332556 MYD88Q99836 296 aa23.03■■□□□ 1.28
LAMP1-201ENST00000332556 TUBGCP6Q96RT7 1819 aa23.03■■□□□ 1.28
LAMP1-201ENST00000332556 PTH1RQ03431 593 aa23.03■■□□□ 1.28
LAMP1-201ENST00000332556 ATP5J2-PTCD1G3V325 749 aa23.02■■□□□ 1.28
LAMP1-201ENST00000332556 PTCD1O75127 700 aaKnown RBP23.02■■□□□ 1.28
LAMP1-201ENST00000332556 OFD1O75665 1012 aa23.02■■□□□ 1.28
LAMP1-201ENST00000332556 HOXB7P09629 217 aa23.02■■□□□ 1.28
LAMP1-201ENST00000332556 EDC3Q96F86 508 aaKnown RBP23.02■■□□□ 1.28
LAMP1-201ENST00000332556 SYCE3A1L190 88 aa23.02■■□□□ 1.28
LAMP1-201ENST00000332556 R3HCC1Q9Y3T6 440 aaKnown RBP23.02■■□□□ 1.28
LAMP1-201ENST00000332556 CHGBP05060 677 aa23.01■■□□□ 1.27
LAMP1-201ENST00000332556 CLASRPQ8N2M8 674 aaKnown RBP23.01■■□□□ 1.27
LAMP1-201ENST00000332556 TMEM63CQ9P1W3 806 aa23.01■■□□□ 1.27
LAMP1-201ENST00000332556 TMEM94Q12767 1356 aa23.01■■□□□ 1.27
LAMP1-201ENST00000332556 GRM8O00222 908 aa23.01■■□□□ 1.27
LAMP1-201ENST00000332556 SGSM2O43147 1006 aa23.01■■□□□ 1.27
LAMP1-201ENST00000332556 SASH1O94885 1247 aa23.01■■□□□ 1.27
LAMP1-201ENST00000332556 IFIT2P09913 472 aaKnown RBP23.01■■□□□ 1.27
LAMP1-201ENST00000332556 CNTROBQ8N137 903 aa23.01■■□□□ 1.27
LAMP1-201ENST00000332556 PKNOX2Q96KN3 472 aa23.01■■□□□ 1.27
LAMP1-201ENST00000332556 SNX14Q9Y5W7 946 aa23■■□□□ 1.27
LAMP1-201ENST00000332556 LMO7Q8WWI1 1683 aa23■■□□□ 1.27
LAMP1-201ENST00000332556 RNF214Q8ND24 703 aa23■■□□□ 1.27
LAMP1-201ENST00000332556 EAF2Q96CJ1 260 aaPredicted RBP23■■□□□ 1.27
LAMP1-201ENST00000332556 BOLA2Q9H3K6 86 aa23■■□□□ 1.27
LAMP1-201ENST00000332556 NPHP3Q7Z494 1330 aa23■■□□□ 1.27
LAMP1-201ENST00000332556 CYP27B1O15528 508 aa22.99■■□□□ 1.27
LAMP1-201ENST00000332556 PHKG2P15735 406 aa22.99■■□□□ 1.27
LAMP1-201ENST00000332556 SLC52A2Q9HAB3 445 aa22.99■■□□□ 1.27
LAMP1-201ENST00000332556 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.99■■□□□ 1.27
LAMP1-201ENST00000332556 KDM6AO15550 1401 aaPredicted RBP22.99■■□□□ 1.27
LAMP1-201ENST00000332556 MEGF6O75095 1541 aa22.99■■□□□ 1.27
LAMP1-201ENST00000332556 TATP17735 454 aaPredicted RBP22.99■■□□□ 1.27
LAMP1-201ENST00000332556 HSPA4P34932 840 aa22.99■■□□□ 1.27
LAMP1-201ENST00000332556 FAM227BQ96M60 508 aa22.99■■□□□ 1.27
LAMP1-201ENST00000332556 LSG1Q9H089 658 aaKnown RBP22.99■■□□□ 1.27
LAMP1-201ENST00000332556 CWC22Q9HCG8 908 aaKnown RBP22.99■■□□□ 1.27
LAMP1-201ENST00000332556 ADCK5Q3MIX3 580 aa22.98■■□□□ 1.27
LAMP1-201ENST00000332556 DDX21Q9NR30 783 aaKnown RBP eCLIP22.98■■□□□ 1.27
LAMP1-201ENST00000332556 DIAPH3Q9NSV4 1193 aa22.98■■□□□ 1.27
LAMP1-201ENST00000332556 HYPKQ9NX55 129 aa22.97■■□□□ 1.27
LAMP1-201ENST00000332556 ZNF142P52746 1687 aaPredicted RBP22.97■■□□□ 1.27
LAMP1-201ENST00000332556 SLIT3O75094 1523 aa22.97■■□□□ 1.27
LAMP1-201ENST00000332556 LARGE1O95461 756 aa22.97■■□□□ 1.27
LAMP1-201ENST00000332556 PRPF40BQ6NWY9 871 aaKnown RBP22.97■■□□□ 1.27
LAMP1-201ENST00000332556 TCEANC2Q96MN5 208 aa22.97■■□□□ 1.27
LAMP1-201ENST00000332556 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.96■■□□□ 1.27
LAMP1-201ENST00000332556 LINS1Q8NG48 757 aa22.96■■□□□ 1.27
LAMP1-201ENST00000332556 AK2P54819 239 aa22.96■■□□□ 1.27
LAMP1-201ENST00000332556 ADAMTSL3P82987 1691 aa22.96■■□□□ 1.27
LAMP1-201ENST00000332556 HEG1Q9ULI3 1381 aa22.95■■□□□ 1.26
LAMP1-201ENST00000332556 CASTP20810 708 aaKnown RBP22.95■■□□□ 1.26
LAMP1-201ENST00000332556 ECHDC1Q9NTX5 307 aa22.95■■□□□ 1.26
LAMP1-201ENST00000332556 RAD50Q92878 1312 aa22.95■■□□□ 1.26
LAMP1-201ENST00000332556 PDLIM2Q96JY6 352 aa22.95■■□□□ 1.26
LAMP1-201ENST00000332556 NOL7Q9UMY1 257 aaKnown RBP22.95■■□□□ 1.26
LAMP1-201ENST00000332556 ALDH1L1O75891 902 aa22.94■■□□□ 1.26
LAMP1-201ENST00000332556 G3BP1Q13283 466 aaKnown RBP eCLIP22.94■■□□□ 1.26
LAMP1-201ENST00000332556 TAF6LQ9Y6J9 622 aa22.94■■□□□ 1.26
LAMP1-201ENST00000332556 NEURL1BA8MQ27 555 aa22.94■■□□□ 1.26
LAMP1-201ENST00000332556 FAM13BQ9NYF5 915 aa22.94■■□□□ 1.26
LAMP1-201ENST00000332556 GLRX3O76003 335 aaKnown RBP22.93■■□□□ 1.26
LAMP1-201ENST00000332556 UBE3BQ7Z3V4 1068 aa22.93■■□□□ 1.26
LAMP1-201ENST00000332556 TRPM3Q9HCF6 1732 aaPredicted RBP22.93■■□□□ 1.26
LAMP1-201ENST00000332556 DDX58O95786 925 aaKnown RBP22.93■■□□□ 1.26
LAMP1-201ENST00000332556 TTC5Q8N0Z6 440 aa22.93■■□□□ 1.26
LAMP1-201ENST00000332556 AOX1Q06278 1338 aa22.92■■□□□ 1.26
LAMP1-201ENST00000332556 N4BP2Q86UW6 1770 aaPredicted RBP22.92■■□□□ 1.26
LAMP1-201ENST00000332556 GADD45BO75293 160 aaPredicted RBP22.92■■□□□ 1.26
LAMP1-201ENST00000332556 LRSAM1Q6UWE0 723 aa22.92■■□□□ 1.26
LAMP1-201ENST00000332556 RUFY3Q7L099 469 aa22.92■■□□□ 1.26
LAMP1-201ENST00000332556 CUL4AQ13619 759 aa22.92■■□□□ 1.26
LAMP1-201ENST00000332556 HSP90AB4PQ58FF6 505 aa22.92■■□□□ 1.26
LAMP1-201ENST00000332556 ARID3AQ99856 593 aa22.92■■□□□ 1.26
LAMP1-201ENST00000332556 PDCL3Q9H2J4 239 aa22.92■■□□□ 1.26
LAMP1-201ENST00000332556 MTX1Q13505 466 aa22.91■■□□□ 1.26
LAMP1-201ENST00000332556 IFNL2Q8IZJ0 200 aa22.91■■□□□ 1.26
LAMP1-201ENST00000332556 JAKMIP1Q96N16 626 aaKnown RBP22.91■■□□□ 1.26
LAMP1-201ENST00000332556 CHMP3Q9Y3E7 222 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms