RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 NYAP1Q6ZVC0 841 aa28.8■■■□□ 2.2
SOX1-201ENST00000330949 SNX14Q9Y5W7 946 aa28.8■■■□□ 2.2
SOX1-201ENST00000330949 CAMK4Q16566 473 aa28.8■■■□□ 2.2
SOX1-201ENST00000330949 ELP1O95163 1332 aa28.8■■■□□ 2.2
SOX1-201ENST00000330949 RIMBP3CA6NJZ7 1639 aa28.8■■■□□ 2.2
SOX1-201ENST00000330949 RIMBP3BA6NNM3 1639 aa28.8■■■□□ 2.2
SOX1-201ENST00000330949 RIMBP3Q9UFD9 1639 aa28.8■■■□□ 2.2
SOX1-201ENST00000330949 KRT85P78386 507 aa28.79■■■□□ 2.2
SOX1-201ENST00000330949 AOX1Q06278 1338 aa28.79■■■□□ 2.2
SOX1-201ENST00000330949 ESF1Q9H501 851 aaKnown RBP28.79■■■□□ 2.2
SOX1-201ENST00000330949 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.79■■■□□ 2.2
SOX1-201ENST00000330949 V9GYY5 206 aaPredicted RBP28.79■■■□□ 2.2
SOX1-201ENST00000330949 SLU7O95391 586 aaKnown RBP28.79■■■□□ 2.2
SOX1-201ENST00000330949 GNAI2P04899 355 aa28.79■■■□□ 2.2
SOX1-201ENST00000330949 CCT4P50991 539 aaKnown RBP28.79■■■□□ 2.2
SOX1-201ENST00000330949 CDK12Q9NYV4 1490 aaPredicted RBP28.78■■■□□ 2.2
SOX1-201ENST00000330949 HTATSF1O43719 755 aaKnown RBP28.78■■■□□ 2.2
SOX1-201ENST00000330949 LRRC8AQ8IWT6 810 aa28.78■■■□□ 2.2
SOX1-201ENST00000330949 CCDC61Q9Y6R9 512 aa28.77■■■□□ 2.2
SOX1-201ENST00000330949 CPS1P31327 1500 aa28.77■■■□□ 2.2
SOX1-201ENST00000330949 UNC5CLQ8IV45 518 aa28.77■■■□□ 2.2
SOX1-201ENST00000330949 ST7Q9NRC1 585 aa28.77■■■□□ 2.2
SOX1-201ENST00000330949 DDX19AQ9NUU7 478 aaKnown RBP28.77■■■□□ 2.2
SOX1-201ENST00000330949 PRR36Q9H6K5 1346 aa28.76■■■□□ 2.2
SOX1-201ENST00000330949 CAVIN2O95810 425 aa28.76■■■□□ 2.2
SOX1-201ENST00000330949 CKAP2LQ8IYA6 745 aa28.76■■■□□ 2.2
SOX1-201ENST00000330949 TRIM34Q9BYJ4 488 aa28.76■■■□□ 2.2
SOX1-201ENST00000330949 IL25Q9H293 177 aa28.76■■■□□ 2.2
SOX1-201ENST00000330949 VPS37CA5D8V6 355 aaPredicted RBP28.76■■■□□ 2.19
SOX1-201ENST00000330949 LIG1P18858 919 aa28.76■■■□□ 2.19
SOX1-201ENST00000330949 CCDC144BQ3MJ40 725 aa28.76■■■□□ 2.19
SOX1-201ENST00000330949 TTC6Q86TZ1 520 aa28.76■■■□□ 2.19
SOX1-201ENST00000330949 CCDC144CPQ8IYA2 1237 aa28.76■■■□□ 2.19
SOX1-201ENST00000330949 KIF2AO00139 706 aaPredicted RBP28.75■■■□□ 2.19
SOX1-201ENST00000330949 HNRNPH2P55795 449 aaKnown RBP28.75■■■□□ 2.19
SOX1-201ENST00000330949 ZNF165P49910 485 aa28.75■■■□□ 2.19
SOX1-201ENST00000330949 MAPK8IP2Q13387 824 aaPredicted RBP28.75■■■□□ 2.19
SOX1-201ENST00000330949 RBM43Q6ZSC3 357 aaKnown RBP28.75■■■□□ 2.19
SOX1-201ENST00000330949 ZNF446Q9NWS9 450 aa28.75■■■□□ 2.19
SOX1-201ENST00000330949 CHMP3Q9Y3E7 222 aa28.75■■■□□ 2.19
SOX1-201ENST00000330949 CCDC83Q8IWF9 413 aa28.74■■■□□ 2.19
SOX1-201ENST00000330949 ZSCAN31Q96LW9 406 aaPredicted RBP28.74■■■□□ 2.19
SOX1-201ENST00000330949 SH2B1Q9NRF2 756 aaPredicted RBP28.74■■■□□ 2.19
SOX1-201ENST00000330949 HSP90AB2PQ58FF8 381 aa28.74■■■□□ 2.19
SOX1-201ENST00000330949 LARP6Q9BRS8 491 aaKnown RBP28.74■■■□□ 2.19
SOX1-201ENST00000330949 DACT1Q9NYF0 836 aa28.74■■■□□ 2.19
SOX1-201ENST00000330949 GOLGA6L4A6NEF3 574 aa28.73■■■□□ 2.19
SOX1-201ENST00000330949 SLC4A10Q6U841 1118 aa28.73■■■□□ 2.19
SOX1-201ENST00000330949 USP27XA6NNY8 438 aa28.72■■■□□ 2.19
SOX1-201ENST00000330949 SGSM2O43147 1006 aa28.72■■■□□ 2.19
SOX1-201ENST00000330949 SLC4A2P04920 1241 aa28.72■■■□□ 2.19
SOX1-201ENST00000330949 EIF4A2Q14240 407 aaKnown RBP28.72■■■□□ 2.19
SOX1-201ENST00000330949 FEZ2Q9UHY8 353 aaPredicted RBP28.72■■■□□ 2.19
SOX1-201ENST00000330949 ATP7BP35670 1465 aa28.72■■■□□ 2.19
SOX1-201ENST00000330949 H2AFXP16104 143 aaPredicted RBP28.72■■■□□ 2.19
SOX1-201ENST00000330949 HYPKQ9NX55 129 aa28.72■■■□□ 2.19
SOX1-201ENST00000330949 CHL1O00533 1208 aa28.71■■■□□ 2.19
SOX1-201ENST00000330949 SKILP12757 684 aa28.71■■■□□ 2.19
SOX1-201ENST00000330949 EDC4Q6P2E9 1401 aaKnown RBP28.71■■■□□ 2.19
SOX1-201ENST00000330949 SARM1Q6SZW1 724 aa28.7■■■□□ 2.19
SOX1-201ENST00000330949 MRFAP1L1Q96HT8 127 aa28.7■■■□□ 2.19
SOX1-201ENST00000330949 CLSTN2Q9H4D0 955 aa28.7■■■□□ 2.19
SOX1-201ENST00000330949 ZKSCAN7Q9P0L1 754 aaPredicted RBP28.7■■■□□ 2.19
SOX1-201ENST00000330949 FOXO3O43524 673 aa28.7■■■□□ 2.18
SOX1-201ENST00000330949 LARGE1O95461 756 aa28.7■■■□□ 2.18
SOX1-201ENST00000330949 TEX35Q5T0J7 233 aa28.7■■■□□ 2.18
SOX1-201ENST00000330949 RASEFQ8IZ41 740 aa28.7■■■□□ 2.18
SOX1-201ENST00000330949 SCAND2PQ9GZW5 306 aaPredicted RBP28.7■■■□□ 2.18
SOX1-201ENST00000330949 ERBB3P21860 1342 aa28.7■■■□□ 2.18
SOX1-201ENST00000330949 NPHP3Q7Z494 1330 aa28.7■■■□□ 2.18
SOX1-201ENST00000330949 CASTP20810 708 aaKnown RBP28.69■■■□□ 2.18
SOX1-201ENST00000330949 RAD51AP2Q09MP3 1159 aa28.69■■■□□ 2.18
SOX1-201ENST00000330949 KCND1Q9NSA2 647 aa28.69■■■□□ 2.18
SOX1-201ENST00000330949 LSG1Q9H089 658 aaKnown RBP28.69■■■□□ 2.18
SOX1-201ENST00000330949 FHOD1Q9Y613 1164 aa28.68■■■□□ 2.18
SOX1-201ENST00000330949 TTC21AQ8NDW8 1320 aa28.68■■■□□ 2.18
SOX1-201ENST00000330949 GOLGA6L19H0YKK7 550 aa28.68■■■□□ 2.18
SOX1-201ENST00000330949 VPS53Q5VIR6 699 aa28.68■■■□□ 2.18
SOX1-201ENST00000330949 NECTIN2Q92692 538 aa28.68■■■□□ 2.18
SOX1-201ENST00000330949 DNAJC25Q9H1X3 360 aa28.68■■■□□ 2.18
SOX1-201ENST00000330949 SETD1AO15047 1707 aaKnown RBP28.68■■■□□ 2.18
SOX1-201ENST00000330949 DIP2BQ9P265 1576 aa28.67■■■□□ 2.18
SOX1-201ENST00000330949 F6X3S4 739 aa28.67■■■□□ 2.18
SOX1-201ENST00000330949 CCAR2Q8N163 923 aaKnown RBP28.67■■■□□ 2.18
SOX1-201ENST00000330949 GNAI3P08754 354 aa28.66■■■□□ 2.18
SOX1-201ENST00000330949 ATP8B2P98198 1209 aa28.66■■■□□ 2.18
SOX1-201ENST00000330949 GTF3C6Q969F1 213 aa28.66■■■□□ 2.18
SOX1-201ENST00000330949 TRERF1Q96PN7 1200 aa28.66■■■□□ 2.18
SOX1-201ENST00000330949 IRX3P78415 501 aaPredicted RBP28.66■■■□□ 2.18
SOX1-201ENST00000330949 LARP1BQ659C4 914 aaKnown RBP28.66■■■□□ 2.18
SOX1-201ENST00000330949 NRXN3Q9Y4C0 1643 aa28.65■■■□□ 2.18
SOX1-201ENST00000330949 PDRG1Q9NUG6 133 aa28.65■■■□□ 2.18
SOX1-201ENST00000330949 DLC1Q96QB1 1528 aa28.65■■■□□ 2.18
SOX1-201ENST00000330949 PDCP20941 246 aa28.65■■■□□ 2.18
SOX1-201ENST00000330949 TXLNBQ8N3L3 684 aa28.65■■■□□ 2.18
SOX1-201ENST00000330949 SLC26A8Q96RN1 970 aa28.65■■■□□ 2.18
SOX1-201ENST00000330949 L2HGDHQ9H9P8 463 aa28.65■■■□□ 2.18
SOX1-201ENST00000330949 SPATA31D1Q6ZQQ2 1576 aa28.64■■■□□ 2.18
SOX1-201ENST00000330949 PNMA6EA0A0J9YXQ4 647 aa28.64■■■□□ 2.18
SOX1-201ENST00000330949 SPATA32Q96LK8 384 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms