RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 FAM200AQ8TCP9 573 aa17.22■□□□□ 0.35
SNX20-202ENST00000330943 DDX54Q8TDD1 881 aaKnown RBP17.22■□□□□ 0.35
SNX20-202ENST00000330943 SPATA31D1Q6ZQQ2 1576 aa17.22■□□□□ 0.35
SNX20-202ENST00000330943 LUZP1Q86V48 1076 aa17.22■□□□□ 0.35
SNX20-202ENST00000330943 KIF1BPQ96EK5 621 aa17.22■□□□□ 0.35
SNX20-202ENST00000330943 PRPF40BQ6NWY9 871 aaKnown RBP17.21■□□□□ 0.35
SNX20-202ENST00000330943 CTIFO43310 598 aaKnown RBP17.21■□□□□ 0.35
SNX20-202ENST00000330943 MAP3K11Q16584 847 aa17.21■□□□□ 0.35
SNX20-202ENST00000330943 C14orf37Q86TY3 774 aa17.21■□□□□ 0.35
SNX20-202ENST00000330943 FERMT3Q86UX7 667 aa17.21■□□□□ 0.35
SNX20-202ENST00000330943 NECAB1Q8N987 351 aa17.21■□□□□ 0.35
SNX20-202ENST00000330943 NUP62CLQ9H1M0 184 aa17.21■□□□□ 0.35
SNX20-202ENST00000330943 PTH1RQ03431 593 aa17.2■□□□□ 0.34
SNX20-202ENST00000330943 TTC6Q86TZ1 520 aa17.2■□□□□ 0.34
SNX20-202ENST00000330943 KLHL34Q8N239 644 aa17.2■□□□□ 0.34
SNX20-202ENST00000330943 PHAXQ9H814 394 aaKnown RBP17.2■□□□□ 0.34
SNX20-202ENST00000330943 LIG1P18858 919 aa17.2■□□□□ 0.34
SNX20-202ENST00000330943 TYRO3Q06418 890 aa17.2■□□□□ 0.34
SNX20-202ENST00000330943 POLA2Q14181 598 aa17.2■□□□□ 0.34
SNX20-202ENST00000330943 VPS53Q5VIR6 699 aa17.2■□□□□ 0.34
SNX20-202ENST00000330943 DRC7Q8IY82 874 aa17.2■□□□□ 0.34
SNX20-202ENST00000330943 CYP46A1Q9Y6A2 500 aa17.2■□□□□ 0.34
SNX20-202ENST00000330943 MRVI1Q9Y6F6 885 aa17.2■□□□□ 0.34
SNX20-202ENST00000330943 ST3GAL1Q11201 340 aa17.2■□□□□ 0.34
SNX20-202ENST00000330943 LRMPQ12912 555 aa17.2■□□□□ 0.34
SNX20-202ENST00000330943 FAM173BQ6P4H8 233 aa17.2■□□□□ 0.34
SNX20-202ENST00000330943 CCDC186Q7Z3E2 898 aa17.2■□□□□ 0.34
SNX20-202ENST00000330943 CKAP2LQ8IYA6 745 aa17.2■□□□□ 0.34
SNX20-202ENST00000330943 C16orf45Q96MC5 204 aaPredicted RBP17.2■□□□□ 0.34
SNX20-202ENST00000330943 EYA1Q99502 592 aa17.2■□□□□ 0.34
SNX20-202ENST00000330943 SH2B1Q9NRF2 756 aaPredicted RBP17.2■□□□□ 0.34
SNX20-202ENST00000330943 KRT85P78386 507 aa17.19■□□□□ 0.34
SNX20-202ENST00000330943 ZSCAN31Q96LW9 406 aaPredicted RBP17.19■□□□□ 0.34
SNX20-202ENST00000330943 PXDNLA1KZ92 1463 aa17.19■□□□□ 0.34
SNX20-202ENST00000330943 ME3Q16798 604 aa17.19■□□□□ 0.34
SNX20-202ENST00000330943 CEP170BQ9Y4F5 1589 aaPredicted RBP17.18■□□□□ 0.34
SNX20-202ENST00000330943 USP6P35125 1406 aa17.18■□□□□ 0.34
SNX20-202ENST00000330943 IGSF3O75054 1194 aa17.18■□□□□ 0.34
SNX20-202ENST00000330943 LARP1BQ659C4 914 aaKnown RBP17.18■□□□□ 0.34
SNX20-202ENST00000330943 KIF20AO95235 890 aa17.18■□□□□ 0.34
SNX20-202ENST00000330943 NCBP1Q09161 790 aaKnown RBP17.18■□□□□ 0.34
SNX20-202ENST00000330943 OS9Q13438 667 aaPredicted RBP17.18■□□□□ 0.34
SNX20-202ENST00000330943 HDGFL1Q5TGJ6 251 aa17.18■□□□□ 0.34
SNX20-202ENST00000330943 CDC37L1Q7L3B6 337 aa17.18■□□□□ 0.34
SNX20-202ENST00000330943 AMOTL2Q9Y2J4 779 aa17.18■□□□□ 0.34
SNX20-202ENST00000330943 KDRP35968 1356 aa17.18■□□□□ 0.34
SNX20-202ENST00000330943 NALCNQ8IZF0 1738 aa17.18■□□□□ 0.34
SNX20-202ENST00000330943 GNAT3A8MTJ3 354 aa17.17■□□□□ 0.34
SNX20-202ENST00000330943 NBPF7P0C2Y1 421 aaPredicted RBP17.17■□□□□ 0.34
SNX20-202ENST00000330943 ANO6Q4KMQ2 910 aa17.17■□□□□ 0.34
SNX20-202ENST00000330943 RUFY2Q8WXA3 655 aa17.17■□□□□ 0.34
SNX20-202ENST00000330943 LTV1Q96GA3 475 aaPredicted RBP17.17■□□□□ 0.34
SNX20-202ENST00000330943 ZSWIM6Q9HCJ5 1215 aa17.17■□□□□ 0.34
SNX20-202ENST00000330943 NRBP1Q9UHY1 535 aa17.17■□□□□ 0.34
SNX20-202ENST00000330943 USP31Q70CQ4 1352 aa17.17■□□□□ 0.34
SNX20-202ENST00000330943 AMPHP49418 695 aa17.17■□□□□ 0.34
SNX20-202ENST00000330943 TNMDQ9H2S6 317 aa17.17■□□□□ 0.34
SNX20-202ENST00000330943 CBX8Q9HC52 389 aa17.17■□□□□ 0.34
SNX20-202ENST00000330943 FLT4P35916 1363 aa17.17■□□□□ 0.34
SNX20-202ENST00000330943 FMN2Q9NZ56 1722 aa17.17■□□□□ 0.34
SNX20-202ENST00000330943 DACT1Q9NYF0 836 aa17.17■□□□□ 0.34
SNX20-202ENST00000330943 N4BP2Q86UW6 1770 aaPredicted RBP17.16■□□□□ 0.34
SNX20-202ENST00000330943 MAP3K5Q99683 1374 aa17.16■□□□□ 0.34
SNX20-202ENST00000330943 GLRX3O76003 335 aaKnown RBP17.16■□□□□ 0.34
SNX20-202ENST00000330943 TRIM5Q9C035 493 aa17.16■□□□□ 0.34
SNX20-202ENST00000330943 TECPR2O15040 1411 aa17.16■□□□□ 0.34
SNX20-202ENST00000330943 SIRT1Q96EB6 747 aa17.16■□□□□ 0.34
SNX20-202ENST00000330943 TPCN1Q9ULQ1 816 aa17.16■□□□□ 0.34
SNX20-202ENST00000330943 IGSF1Q8N6C5 1336 aa17.16■□□□□ 0.34
SNX20-202ENST00000330943 TMEM2Q9UHN6 1383 aa17.15■□□□□ 0.34
SNX20-202ENST00000330943 GOLGA6L4A6NEF3 574 aa17.15■□□□□ 0.34
SNX20-202ENST00000330943 KIF13AQ9H1H9 1805 aa17.15■□□□□ 0.34
SNX20-202ENST00000330943 SBNO1A3KN83 1393 aa17.15■□□□□ 0.34
SNX20-202ENST00000330943 CACNA1FO60840 1977 aa17.15■□□□□ 0.34
SNX20-202ENST00000330943 KCNJ4P48050 445 aa17.15■□□□□ 0.34
SNX20-202ENST00000330943 TM6SF1Q9BZW5 370 aa17.15■□□□□ 0.34
SNX20-202ENST00000330943 HTATSF1O43719 755 aaKnown RBP17.14■□□□□ 0.33
SNX20-202ENST00000330943 TNNT1P13805 278 aa17.14■□□□□ 0.33
SNX20-202ENST00000330943 ZKSCAN1P17029 563 aaPredicted RBP17.14■□□□□ 0.33
SNX20-202ENST00000330943 NGDNQ8NEJ9 315 aaKnown RBP17.14■□□□□ 0.33
SNX20-202ENST00000330943 LRRC37A3O60309 1634 aa17.14■□□□□ 0.33
SNX20-202ENST00000330943 SMTNL1A8MU46 457 aa17.14■□□□□ 0.33
SNX20-202ENST00000330943 IL17REQ8NFR9 667 aa17.14■□□□□ 0.33
SNX20-202ENST00000330943 FEZ1Q99689 392 aa17.14■□□□□ 0.33
SNX20-202ENST00000330943 TFIP11Q9UBB9 837 aaKnown RBP17.14■□□□□ 0.33
SNX20-202ENST00000330943 TTC41PQ6P2S7 1318 aa17.14■□□□□ 0.33
SNX20-202ENST00000330943 PLEKHG3A1L390 1219 aa17.14■□□□□ 0.33
SNX20-202ENST00000330943 EIF2S2P20042 333 aaKnown RBP17.14■□□□□ 0.33
SNX20-202ENST00000330943 ZNF75DP51815 510 aa17.14■□□□□ 0.33
SNX20-202ENST00000330943 ZSCAN25Q6NSZ9 544 aa17.14■□□□□ 0.33
SNX20-202ENST00000330943 ELP1O95163 1332 aa17.13■□□□□ 0.33
SNX20-202ENST00000330943 TAF7Q15545 349 aaPredicted RBP17.13■□□□□ 0.33
SNX20-202ENST00000330943 HSP90AB4PQ58FF6 505 aa17.13■□□□□ 0.33
SNX20-202ENST00000330943 SPATA32Q96LK8 384 aa17.13■□□□□ 0.33
SNX20-202ENST00000330943 CRYBG1Q9Y4K1 1723 aa17.13■□□□□ 0.33
SNX20-202ENST00000330943 NAA30Q147X3 362 aaPredicted RBP17.13■□□□□ 0.33
SNX20-202ENST00000330943 RBM8AQ9Y5S9 174 aaKnown RBP17.13■□□□□ 0.33
SNX20-202ENST00000330943 CCDC171Q6TFL3 1326 aa17.13■□□□□ 0.33
SNX20-202ENST00000330943 COL9A3Q14050 684 aaPredicted RBP17.12■□□□□ 0.33
SNX20-202ENST00000330943 NECTIN1Q15223 517 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms