RNA–Protein interactions for RNA: ENST00000329078.7

SPNS2-201, Transcript of sphingolipid transporter 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPNS2, Length 3,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-201ENST00000329078 RIMBP3CA6NJZ7 1639 aa23.83■■□□□ 1.41
SPNS2-201ENST00000329078 RIMBP3BA6NNM3 1639 aa23.83■■□□□ 1.41
SPNS2-201ENST00000329078 RIMBP3Q9UFD9 1639 aa23.83■■□□□ 1.41
SPNS2-201ENST00000329078 USP31Q70CQ4 1352 aa23.83■■□□□ 1.4
SPNS2-201ENST00000329078 ADCK5Q3MIX3 580 aa23.82■■□□□ 1.4
SPNS2-201ENST00000329078 ANKRD24Q8TF21 1146 aa23.82■■□□□ 1.4
SPNS2-201ENST00000329078 FAM227BQ96M60 508 aa23.82■■□□□ 1.4
SPNS2-201ENST00000329078 BEND3Q5T5X7 828 aa23.82■■□□□ 1.4
SPNS2-201ENST00000329078 DBF4Q9UBU7 674 aaPredicted RBP23.82■■□□□ 1.4
SPNS2-201ENST00000329078 LRSAM1Q6UWE0 723 aa23.82■■□□□ 1.4
SPNS2-201ENST00000329078 IP6K1Q92551 441 aa23.82■■□□□ 1.4
SPNS2-201ENST00000329078 SYAP1Q96A49 352 aaPredicted RBP23.82■■□□□ 1.4
SPNS2-201ENST00000329078 ATP5J2-PTCD1G3V325 749 aa23.81■■□□□ 1.4
SPNS2-201ENST00000329078 PTCD1O75127 700 aaKnown RBP23.81■■□□□ 1.4
SPNS2-201ENST00000329078 LARGE1O95461 756 aa23.81■■□□□ 1.4
SPNS2-201ENST00000329078 BRD1O95696 1058 aa23.81■■□□□ 1.4
SPNS2-201ENST00000329078 MBD3O95983 291 aa23.81■■□□□ 1.4
SPNS2-201ENST00000329078 DNAJC2Q99543 621 aaKnown RBP23.81■■□□□ 1.4
SPNS2-201ENST00000329078 PDRG1Q9NUG6 133 aa23.81■■□□□ 1.4
SPNS2-201ENST00000329078 USP25Q9UHP3 1055 aa23.81■■□□□ 1.4
SPNS2-201ENST00000329078 WDR33Q9C0J8 1336 aaKnown RBP23.81■■□□□ 1.4
SPNS2-201ENST00000329078 HTATSF1O43719 755 aaKnown RBP23.81■■□□□ 1.4
SPNS2-201ENST00000329078 GCP02774 474 aa23.81■■□□□ 1.4
SPNS2-201ENST00000329078 SPDYE4A6NLX3 237 aa23.81■■□□□ 1.4
SPNS2-201ENST00000329078 SGSM2O43147 1006 aa23.81■■□□□ 1.4
SPNS2-201ENST00000329078 RAB11FIP3O75154 756 aa23.81■■□□□ 1.4
SPNS2-201ENST00000329078 ZNF445P59923 1031 aa23.8■■□□□ 1.4
SPNS2-201ENST00000329078 CHRNA2Q15822 529 aa23.8■■□□□ 1.4
SPNS2-201ENST00000329078 GLRX3O76003 335 aaKnown RBP23.8■■□□□ 1.4
SPNS2-201ENST00000329078 ZKSCAN1P17029 563 aaPredicted RBP23.8■■□□□ 1.4
SPNS2-201ENST00000329078 HCLS1P14317 486 aaPredicted RBP23.79■■□□□ 1.4
SPNS2-201ENST00000329078 ANKLE2Q86XL3 938 aa23.79■■□□□ 1.4
SPNS2-201ENST00000329078 PI4K2BQ8TCG2 481 aa23.79■■□□□ 1.4
SPNS2-201ENST00000329078 MYD88Q99836 296 aa23.79■■□□□ 1.4
SPNS2-201ENST00000329078 TLR7Q9NYK1 1049 aaKnown RBP23.79■■□□□ 1.4
SPNS2-201ENST00000329078 NRXN3Q9Y4C0 1643 aa23.79■■□□□ 1.4
SPNS2-201ENST00000329078 GJB2P29033 226 aa23.78■■□□□ 1.4
SPNS2-201ENST00000329078 HSPA4P34932 840 aa23.78■■□□□ 1.4
SPNS2-201ENST00000329078 CAMK4Q16566 473 aa23.78■■□□□ 1.4
SPNS2-201ENST00000329078 GIMAP6Q6P9H5 292 aa23.78■■□□□ 1.4
SPNS2-201ENST00000329078 RUFY2Q8WXA3 655 aa23.78■■□□□ 1.4
SPNS2-201ENST00000329078 RAPGEF4Q8WZA2 1011 aa23.78■■□□□ 1.4
SPNS2-201ENST00000329078 BICC1Q9H694 974 aaKnown RBP23.78■■□□□ 1.4
SPNS2-201ENST00000329078 ECHDC1Q9NTX5 307 aa23.78■■□□□ 1.4
SPNS2-201ENST00000329078 SYT1P21579 422 aa23.78■■□□□ 1.4
SPNS2-201ENST00000329078 CEBPZQ03701 1054 aaKnown RBP23.78■■□□□ 1.4
SPNS2-201ENST00000329078 HSP90AB4PQ58FF6 505 aa23.78■■□□□ 1.4
SPNS2-201ENST00000329078 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.78■■□□□ 1.4
SPNS2-201ENST00000329078 TECPR2O15040 1411 aa23.78■■□□□ 1.4
SPNS2-201ENST00000329078 DNM1Q05193 864 aaKnown RBP23.78■■□□□ 1.4
SPNS2-201ENST00000329078 LIMCH1Q9UPQ0 1083 aa23.78■■□□□ 1.4
SPNS2-201ENST00000329078 GOLGA6L4A6NEF3 574 aa23.77■■□□□ 1.4
SPNS2-201ENST00000329078 STX6O43752 255 aa23.77■■□□□ 1.4
SPNS2-201ENST00000329078 HSP90B1P14625 803 aaKnown RBP23.77■■□□□ 1.4
SPNS2-201ENST00000329078 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.77■■□□□ 1.4
SPNS2-201ENST00000329078 ITSN1Q15811 1721 aa23.77■■□□□ 1.4
SPNS2-201ENST00000329078 A0A0G2JS52 829 aa23.77■■□□□ 1.4
SPNS2-201ENST00000329078 RUFY3Q7L099 469 aa23.77■■□□□ 1.4
SPNS2-201ENST00000329078 CCDC39Q9UFE4 941 aa23.77■■□□□ 1.4
SPNS2-201ENST00000329078 CYP46A1Q9Y6A2 500 aa23.77■■□□□ 1.4
SPNS2-201ENST00000329078 NFATC2IPQ8NCF5 419 aa23.77■■□□□ 1.39
SPNS2-201ENST00000329078 SUCLG2Q96I99 432 aa23.77■■□□□ 1.39
SPNS2-201ENST00000329078 TFIP11Q9UBB9 837 aaKnown RBP23.77■■□□□ 1.39
SPNS2-201ENST00000329078 AGLP35573 1532 aa23.76■■□□□ 1.39
SPNS2-201ENST00000329078 LRRC2Q9BYS8 371 aa23.76■■□□□ 1.39
SPNS2-201ENST00000329078 STAP2Q9UGK3 403 aa23.76■■□□□ 1.39
SPNS2-201ENST00000329078 KDRP35968 1356 aa23.76■■□□□ 1.39
SPNS2-201ENST00000329078 RNMTO43148 476 aaKnown RBP23.76■■□□□ 1.39
SPNS2-201ENST00000329078 NEXNQ0ZGT2 675 aa23.76■■□□□ 1.39
SPNS2-201ENST00000329078 SPC24Q8NBT2 197 aa23.76■■□□□ 1.39
SPNS2-201ENST00000329078 NEUROD6Q96NK8 337 aa23.75■■□□□ 1.39
SPNS2-201ENST00000329078 CCDC85AQ96PX6 553 aaPredicted RBP23.75■■□□□ 1.39
SPNS2-201ENST00000329078 AXIN2Q9Y2T1 843 aa23.75■■□□□ 1.39
SPNS2-201ENST00000329078 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.75■■□□□ 1.39
SPNS2-201ENST00000329078 PRDM4Q9UKN5 801 aa23.75■■□□□ 1.39
SPNS2-201ENST00000329078 PEAK1Q9H792 1746 aa23.75■■□□□ 1.39
SPNS2-201ENST00000329078 CHGBP05060 677 aa23.75■■□□□ 1.39
SPNS2-201ENST00000329078 ANAPC15P60006 121 aa23.75■■□□□ 1.39
SPNS2-201ENST00000329078 KIAA2012Q0VF49 1180 aa23.75■■□□□ 1.39
SPNS2-201ENST00000329078 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.75■■□□□ 1.39
SPNS2-201ENST00000329078 AKAP4Q5JQC9 854 aa23.74■■□□□ 1.39
SPNS2-201ENST00000329078 PROSER2Q86WR7 435 aaPredicted RBP23.74■■□□□ 1.39
SPNS2-201ENST00000329078 SALL3Q9BXA9 1300 aa23.74■■□□□ 1.39
SPNS2-201ENST00000329078 NMIQ13287 307 aaPredicted RBP23.74■■□□□ 1.39
SPNS2-201ENST00000329078 COPS6Q7L5N1 327 aa23.74■■□□□ 1.39
SPNS2-201ENST00000329078 RAD50Q92878 1312 aa23.74■■□□□ 1.39
SPNS2-201ENST00000329078 DDX58O95786 925 aaKnown RBP23.74■■□□□ 1.39
SPNS2-201ENST00000329078 FBXW7Q969H0 707 aa23.74■■□□□ 1.39
SPNS2-201ENST00000329078 DDX11Q96FC9 970 aa23.74■■□□□ 1.39
SPNS2-201ENST00000329078 RBM8AQ9Y5S9 174 aaKnown RBP23.74■■□□□ 1.39
SPNS2-201ENST00000329078 CDK11BP21127 795 aaKnown RBP23.73■■□□□ 1.39
SPNS2-201ENST00000329078 COL9A3Q14050 684 aaPredicted RBP23.73■■□□□ 1.39
SPNS2-201ENST00000329078 LARP1BQ659C4 914 aaKnown RBP23.73■■□□□ 1.39
SPNS2-201ENST00000329078 SASS6Q6UVJ0 657 aa23.73■■□□□ 1.39
SPNS2-201ENST00000329078 XAGE3Q8WTP9 111 aa23.73■■□□□ 1.39
SPNS2-201ENST00000329078 EAF2Q96CJ1 260 aaPredicted RBP23.73■■□□□ 1.39
SPNS2-201ENST00000329078 LSG1Q9H089 658 aaKnown RBP23.73■■□□□ 1.39
SPNS2-201ENST00000329078 KSR2Q6VAB6 950 aa23.72■■□□□ 1.39
SPNS2-201ENST00000329078 ZSCAN22P10073 491 aaPredicted RBP23.72■■□□□ 1.39
SPNS2-201ENST00000329078 CSPP1Q1MSJ5 1256 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms