RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 HYPKQ9NX55 129 aa17.83■□□□□ 0.44
PTPN21-201ENST00000328736 KIF4BQ2VIQ3 1234 aa17.83■□□□□ 0.44
PTPN21-201ENST00000328736 TDRD12Q587J7 1177 aaKnown RBP17.83■□□□□ 0.44
PTPN21-201ENST00000328736 NAA15Q9BXJ9 866 aaKnown RBP17.82■□□□□ 0.44
PTPN21-201ENST00000328736 LRRC27Q9C0I9 530 aa17.82■□□□□ 0.44
PTPN21-201ENST00000328736 IFIT3O14879 490 aaKnown RBP17.82■□□□□ 0.44
PTPN21-201ENST00000328736 MCM4P33991 863 aa17.82■□□□□ 0.44
PTPN21-201ENST00000328736 DHX37Q8IY37 1157 aaKnown RBP17.82■□□□□ 0.44
PTPN21-201ENST00000328736 CABP5Q9NP86 173 aa17.82■□□□□ 0.44
PTPN21-201ENST00000328736 FERMT3Q86UX7 667 aa17.82■□□□□ 0.44
PTPN21-201ENST00000328736 DNMBPQ6XZF7 1577 aa17.82■□□□□ 0.44
PTPN21-201ENST00000328736 PLB1Q6P1J6 1458 aa17.82■□□□□ 0.44
PTPN21-201ENST00000328736 ABCC11Q96J66 1382 aa17.82■□□□□ 0.44
PTPN21-201ENST00000328736 RARSP54136 660 aaKnown RBP17.82■□□□□ 0.44
PTPN21-201ENST00000328736 ADGRF5Q8IZF2 1346 aa17.81■□□□□ 0.44
PTPN21-201ENST00000328736 MYCNP04198 464 aaPredicted RBP17.81■□□□□ 0.44
PTPN21-201ENST00000328736 CNNM3Q8NE01 707 aa17.81■□□□□ 0.44
PTPN21-201ENST00000328736 SYCE3A1L190 88 aa17.81■□□□□ 0.44
PTPN21-201ENST00000328736 TCP11L1Q9NUJ3 509 aa17.81■□□□□ 0.44
PTPN21-201ENST00000328736 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.81■□□□□ 0.44
PTPN21-201ENST00000328736 SPTY2D1Q68D10 685 aaPredicted RBP17.81■□□□□ 0.44
PTPN21-201ENST00000328736 LIG1P18858 919 aa17.8■□□□□ 0.44
PTPN21-201ENST00000328736 TEX13AQ9BXU3 409 aaPredicted RBP17.8■□□□□ 0.44
PTPN21-201ENST00000328736 HLA-DOAP06340 250 aa17.8■□□□□ 0.44
PTPN21-201ENST00000328736 FBLN1P23142 703 aa17.8■□□□□ 0.44
PTPN21-201ENST00000328736 FBXO31Q5XUX0 539 aaPredicted RBP17.8■□□□□ 0.44
PTPN21-201ENST00000328736 MICALCLQ6ZW33 695 aa17.8■□□□□ 0.44
PTPN21-201ENST00000328736 KIF18AQ8NI77 898 aa17.8■□□□□ 0.44
PTPN21-201ENST00000328736 CEP63Q96MT8 703 aa17.8■□□□□ 0.44
PTPN21-201ENST00000328736 TSNARE1Q96NA8 513 aa17.8■□□□□ 0.44
PTPN21-201ENST00000328736 HOMER2Q9NSB8 354 aa17.8■□□□□ 0.44
PTPN21-201ENST00000328736 LRPPRCP42704 1394 aaKnown RBP17.8■□□□□ 0.44
PTPN21-201ENST00000328736 MACROD2A1Z1Q3 448 aa17.8■□□□□ 0.44
PTPN21-201ENST00000328736 POTEB2H3BUK9 544 aa17.8■□□□□ 0.44
PTPN21-201ENST00000328736 MPRIPQ6WCQ1 1025 aa17.8■□□□□ 0.44
PTPN21-201ENST00000328736 ABCC5O15440 1437 aa17.8■□□□□ 0.44
PTPN21-201ENST00000328736 BAG3O95817 575 aa17.8■□□□□ 0.44
PTPN21-201ENST00000328736 MTIF2P46199 727 aaKnown RBP17.8■□□□□ 0.44
PTPN21-201ENST00000328736 CDC5LQ99459 802 aaKnown RBP17.8■□□□□ 0.44
PTPN21-201ENST00000328736 PDE4BQ07343 736 aa17.79■□□□□ 0.44
PTPN21-201ENST00000328736 CCDC40Q4G0X9 1142 aa17.79■□□□□ 0.44
PTPN21-201ENST00000328736 CCDC8Q9H0W5 538 aaPredicted RBP17.79■□□□□ 0.44
PTPN21-201ENST00000328736 IQGAP2Q13576 1575 aa17.79■□□□□ 0.44
PTPN21-201ENST00000328736 FERP16591 822 aa17.78■□□□□ 0.44
PTPN21-201ENST00000328736 LRRC45Q96CN5 670 aa17.78■□□□□ 0.44
PTPN21-201ENST00000328736 CCDC141Q6ZP82 1450 aa17.78■□□□□ 0.44
PTPN21-201ENST00000328736 PRKCSHP14314 528 aaPredicted RBP17.78■□□□□ 0.44
PTPN21-201ENST00000328736 GUCY1B3Q02153 619 aa17.78■□□□□ 0.44
PTPN21-201ENST00000328736 TSHZ3Q63HK5 1081 aa17.78■□□□□ 0.44
PTPN21-201ENST00000328736 DNAAF4Q8WXU2 420 aa17.78■□□□□ 0.44
PTPN21-201ENST00000328736 KAT14Q9H8E8 782 aa17.78■□□□□ 0.44
PTPN21-201ENST00000328736 MAGI1Q96QZ7 1491 aaPredicted RBP17.78■□□□□ 0.44
PTPN21-201ENST00000328736 C6orf229H3BNL8 230 aa17.77■□□□□ 0.44
PTPN21-201ENST00000328736 UBE4AQ14139 1066 aa17.77■□□□□ 0.44
PTPN21-201ENST00000328736 SYCP3Q8IZU3 236 aa17.77■□□□□ 0.44
PTPN21-201ENST00000328736 SSX2IPQ9Y2D8 614 aa17.77■□□□□ 0.44
PTPN21-201ENST00000328736 NEMFO60524 1076 aa17.77■□□□□ 0.44
PTPN21-201ENST00000328736 GIMAP7Q8NHV1 300 aa17.77■□□□□ 0.44
PTPN21-201ENST00000328736 MYO1BO43795 1136 aa17.77■□□□□ 0.44
PTPN21-201ENST00000328736 GSTO1P78417 241 aa17.77■□□□□ 0.44
PTPN21-201ENST00000328736 KANK3Q6NY19 840 aa17.77■□□□□ 0.44
PTPN21-201ENST00000328736 DDX12PQ92771 950 aa17.77■□□□□ 0.44
PTPN21-201ENST00000328736 CLIP2Q9UDT6 1046 aa17.77■□□□□ 0.44
PTPN21-201ENST00000328736 URI1O94763 535 aaPredicted RBP17.77■□□□□ 0.43
PTPN21-201ENST00000328736 EVI5LQ96CN4 794 aa17.77■□□□□ 0.43
PTPN21-201ENST00000328736 BCCIPQ9P287 314 aaKnown RBP eCLIP17.77■□□□□ 0.43
PTPN21-201ENST00000328736 FAM83GA6ND36 823 aa17.76■□□□□ 0.43
PTPN21-201ENST00000328736 DDX46Q7L014 1031 aaKnown RBP17.76■□□□□ 0.43
PTPN21-201ENST00000328736 NKTRP30414 1462 aaKnown RBP17.76■□□□□ 0.43
PTPN21-201ENST00000328736 EXOC5O00471 708 aa17.76■□□□□ 0.43
PTPN21-201ENST00000328736 PRC1O43663 620 aa17.76■□□□□ 0.43
PTPN21-201ENST00000328736 CCDC172P0C7W6 258 aa17.76■□□□□ 0.43
PTPN21-201ENST00000328736 DBF4Q9UBU7 674 aaPredicted RBP17.76■□□□□ 0.43
PTPN21-201ENST00000328736 LIMCH1Q9UPQ0 1083 aa17.76■□□□□ 0.43
PTPN21-201ENST00000328736 FSD2A1L4K1 749 aa17.76■□□□□ 0.43
PTPN21-201ENST00000328736 IFI16Q16666 785 aaKnown RBP17.76■□□□□ 0.43
PTPN21-201ENST00000328736 PPP1R42Q7Z4L9 355 aa17.76■□□□□ 0.43
PTPN21-201ENST00000328736 DDX19AQ9NUU7 478 aaKnown RBP17.76■□□□□ 0.43
PTPN21-201ENST00000328736 GSDMDP57764 484 aa17.75■□□□□ 0.43
PTPN21-201ENST00000328736 PPP4R3BQ5MIZ7 849 aa17.75■□□□□ 0.43
PTPN21-201ENST00000328736 JARID2Q92833 1246 aaPredicted RBP17.75■□□□□ 0.43
PTPN21-201ENST00000328736 FAM135AQ9P2D6 1515 aa17.75■□□□□ 0.43
PTPN21-201ENST00000328736 TMCO5BA8MYB1 307 aa17.75■□□□□ 0.43
PTPN21-201ENST00000328736 TCERG1LQ5VWI1 586 aa17.75■□□□□ 0.43
PTPN21-201ENST00000328736 DISP3Q9P2K9 1392 aa17.75■□□□□ 0.43
PTPN21-201ENST00000328736 PTPRCP08575 1304 aa17.75■□□□□ 0.43
PTPN21-201ENST00000328736 PPFIA3O75145 1194 aa17.75■□□□□ 0.43
PTPN21-201ENST00000328736 KIF14Q15058 1648 aa17.75■□□□□ 0.43
PTPN21-201ENST00000328736 ACTN2P35609 894 aa17.75■□□□□ 0.43
PTPN21-201ENST00000328736 TRAF1Q13077 416 aa17.75■□□□□ 0.43
PTPN21-201ENST00000328736 CCDC82Q8N4S0 544 aa17.75■□□□□ 0.43
PTPN21-201ENST00000328736 SAMM50Q9Y512 469 aa17.75■□□□□ 0.43
PTPN21-201ENST00000328736 ERICH4A6NGS2 130 aa17.74■□□□□ 0.43
PTPN21-201ENST00000328736 CCDC175P0C221 793 aa17.74■□□□□ 0.43
PTPN21-201ENST00000328736 CEBPAP49715 358 aaPredicted RBP17.74■□□□□ 0.43
PTPN21-201ENST00000328736 ST5P78524 1137 aa17.74■□□□□ 0.43
PTPN21-201ENST00000328736 CCDC174Q6PII3 467 aa17.74■□□□□ 0.43
PTPN21-201ENST00000328736 ESPNB1AK53 854 aa17.74■□□□□ 0.43
PTPN21-201ENST00000328736 SPECC1Q5M775 1068 aa17.74■□□□□ 0.43
PTPN21-201ENST00000328736 ZSCAN30Q86W11 494 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms