RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 PLA2G4DQ86XP0 818 aa13.43□□□□□ -0.26
GINS3-202ENST00000328514 TSPYL4Q9UJ04 414 aa13.43□□□□□ -0.26
GINS3-202ENST00000328514 MRVI1Q9Y6F6 885 aa13.43□□□□□ -0.26
GINS3-202ENST00000328514 MORC2Q9Y6X9 1032 aaPredicted RBP13.43□□□□□ -0.26
GINS3-202ENST00000328514 CHD2O14647 1828 aaKnown RBP13.42□□□□□ -0.26
GINS3-202ENST00000328514 HTATSF1O43719 755 aaKnown RBP13.42□□□□□ -0.26
GINS3-202ENST00000328514 CAVIN2O95810 425 aa13.42□□□□□ -0.26
GINS3-202ENST00000328514 PTGS1P23219 599 aa13.42□□□□□ -0.26
GINS3-202ENST00000328514 GJB2P29033 226 aa13.42□□□□□ -0.26
GINS3-202ENST00000328514 HSPA1LP34931 641 aa13.42□□□□□ -0.26
GINS3-202ENST00000328514 ZSWIM6Q9HCJ5 1215 aa13.42□□□□□ -0.26
GINS3-202ENST00000328514 PEAK1Q9H792 1746 aa13.42□□□□□ -0.26
GINS3-202ENST00000328514 CEBPAP49715 358 aaPredicted RBP13.41□□□□□ -0.26
GINS3-202ENST00000328514 TYRO3Q06418 890 aa13.41□□□□□ -0.26
GINS3-202ENST00000328514 CCDC30Q5VVM6 783 aa13.41□□□□□ -0.26
GINS3-202ENST00000328514 CNTROBQ8N137 903 aa13.41□□□□□ -0.26
GINS3-202ENST00000328514 SPC24Q8NBT2 197 aa13.41□□□□□ -0.26
GINS3-202ENST00000328514 TDRD7Q8NHU6 1098 aaKnown RBP13.41□□□□□ -0.26
GINS3-202ENST00000328514 USP44Q9H0E7 712 aa13.41□□□□□ -0.26
GINS3-202ENST00000328514 NUP62CLQ9H1M0 184 aa13.41□□□□□ -0.26
GINS3-202ENST00000328514 LRRFIP2Q9Y608 721 aaKnown RBP13.41□□□□□ -0.26
GINS3-202ENST00000328514 NRXN3Q9Y4C0 1643 aa13.41□□□□□ -0.26
GINS3-202ENST00000328514 CDC25BP30305 580 aa13.41□□□□□ -0.26
GINS3-202ENST00000328514 FAM193AP78312 1265 aa13.41□□□□□ -0.26
GINS3-202ENST00000328514 PLCB2Q00722 1185 aa13.41□□□□□ -0.26
GINS3-202ENST00000328514 TTC21AQ8NDW8 1320 aa13.4□□□□□ -0.26
GINS3-202ENST00000328514 LARGE1O95461 756 aa13.4□□□□□ -0.26
GINS3-202ENST00000328514 ZNF75DP51815 510 aa13.4□□□□□ -0.26
GINS3-202ENST00000328514 KRT85P78386 507 aa13.4□□□□□ -0.26
GINS3-202ENST00000328514 ZSCAN25Q6NSZ9 544 aa13.4□□□□□ -0.26
GINS3-202ENST00000328514 DDX19AQ9NUU7 478 aaKnown RBP13.4□□□□□ -0.26
GINS3-202ENST00000328514 BABAM1Q9NWV8 329 aa13.4□□□□□ -0.26
GINS3-202ENST00000328514 CCDC186Q7Z3E2 898 aa13.39□□□□□ -0.27
GINS3-202ENST00000328514 TTC6Q86TZ1 520 aa13.39□□□□□ -0.27
GINS3-202ENST00000328514 RHPN1Q8TCX5 695 aa13.39□□□□□ -0.27
GINS3-202ENST00000328514 KIF1BPQ96EK5 621 aa13.39□□□□□ -0.27
GINS3-202ENST00000328514 FAM53CQ9NYF3 392 aa13.39□□□□□ -0.27
GINS3-202ENST00000328514 TTC41PQ6P2S7 1318 aa13.39□□□□□ -0.27
GINS3-202ENST00000328514 UBTFL1P0CB47 393 aaPredicted RBP13.39□□□□□ -0.27
GINS3-202ENST00000328514 CASTP20810 708 aaKnown RBP13.39□□□□□ -0.27
GINS3-202ENST00000328514 PDCP20941 246 aa13.39□□□□□ -0.27
GINS3-202ENST00000328514 ST3GAL1Q11201 340 aa13.39□□□□□ -0.27
GINS3-202ENST00000328514 SCAND2PQ9GZW5 306 aaPredicted RBP13.39□□□□□ -0.27
GINS3-202ENST00000328514 CBX8Q9HC52 389 aa13.39□□□□□ -0.27
GINS3-202ENST00000328514 PDRG1Q9NUG6 133 aa13.39□□□□□ -0.27
GINS3-202ENST00000328514 NPHP3Q7Z494 1330 aa13.38□□□□□ -0.27
GINS3-202ENST00000328514 NEMFO60524 1076 aa13.38□□□□□ -0.27
GINS3-202ENST00000328514 SLFN14P0C7P3 912 aa13.38□□□□□ -0.27
GINS3-202ENST00000328514 TNNT1P13805 278 aa13.38□□□□□ -0.27
GINS3-202ENST00000328514 MTHFSDQ2M296 383 aaKnown RBP13.38□□□□□ -0.27
GINS3-202ENST00000328514 CCDC83Q8IWF9 413 aa13.38□□□□□ -0.27
GINS3-202ENST00000328514 CCDC112Q8NEF3 446 aa13.38□□□□□ -0.27
GINS3-202ENST00000328514 RUFY2Q8WXA3 655 aa13.38□□□□□ -0.27
GINS3-202ENST00000328514 SENP3Q9H4L4 574 aaPredicted RBP13.38□□□□□ -0.27
GINS3-202ENST00000328514 IL1RAPL2Q9NP60 686 aa13.38□□□□□ -0.27
GINS3-202ENST00000328514 MIS18AQ9NYP9 233 aa13.38□□□□□ -0.27
GINS3-202ENST00000328514 CYP46A1Q9Y6A2 500 aa13.38□□□□□ -0.27
GINS3-202ENST00000328514 RBM6P78332 1123 aaKnown RBP13.37□□□□□ -0.27
GINS3-202ENST00000328514 FBXO31Q5XUX0 539 aaPredicted RBP13.37□□□□□ -0.27
GINS3-202ENST00000328514 SARM1Q6SZW1 724 aa13.37□□□□□ -0.27
GINS3-202ENST00000328514 LUZP1Q86V48 1076 aa13.37□□□□□ -0.27
GINS3-202ENST00000328514 NUTM1Q86Y26 1132 aa13.37□□□□□ -0.27
GINS3-202ENST00000328514 KIF18AQ8NI77 898 aa13.37□□□□□ -0.27
GINS3-202ENST00000328514 ALDH8A1Q9H2A2 487 aaPredicted RBP13.37□□□□□ -0.27
GINS3-202ENST00000328514 KCND1Q9NSA2 647 aa13.37□□□□□ -0.27
GINS3-202ENST00000328514 PPP6R1Q9UPN7 881 aa13.37□□□□□ -0.27
GINS3-202ENST00000328514 MAP3K19Q56UN5 1328 aa13.37□□□□□ -0.27
GINS3-202ENST00000328514 GLRX3O76003 335 aaKnown RBP13.37□□□□□ -0.27
GINS3-202ENST00000328514 LIG1P18858 919 aa13.37□□□□□ -0.27
GINS3-202ENST00000328514 SLFNL1Q499Z3 407 aa13.37□□□□□ -0.27
GINS3-202ENST00000328514 HSP90AB4PQ58FF6 505 aa13.37□□□□□ -0.27
GINS3-202ENST00000328514 HSP90AB2PQ58FF8 381 aa13.37□□□□□ -0.27
GINS3-202ENST00000328514 CREBRFQ8IUR6 639 aa13.37□□□□□ -0.27
GINS3-202ENST00000328514 TNMDQ9H2S6 317 aa13.37□□□□□ -0.27
GINS3-202ENST00000328514 CLSTN2Q9H4D0 955 aa13.37□□□□□ -0.27
GINS3-202ENST00000328514 TOPAZ1Q8N9V7 1692 aa13.36□□□□□ -0.27
GINS3-202ENST00000328514 GIGYF1O75420 1035 aaPredicted RBP13.36□□□□□ -0.27
GINS3-202ENST00000328514 LRMPQ12912 555 aa13.36□□□□□ -0.27
GINS3-202ENST00000328514 NECTIN1Q15223 517 aa13.36□□□□□ -0.27
GINS3-202ENST00000328514 ME3Q16798 604 aa13.36□□□□□ -0.27
GINS3-202ENST00000328514 ANO6Q4KMQ2 910 aa13.36□□□□□ -0.27
GINS3-202ENST00000328514 PPP1R42Q7Z4L9 355 aa13.36□□□□□ -0.27
GINS3-202ENST00000328514 C16orf45Q96MC5 204 aaPredicted RBP13.36□□□□□ -0.27
GINS3-202ENST00000328514 SNRKQ9NRH2 765 aa13.36□□□□□ -0.27
GINS3-202ENST00000328514 PRR36Q9H6K5 1346 aa13.36□□□□□ -0.27
GINS3-202ENST00000328514 SURF6O75683 361 aaKnown RBP13.35□□□□□ -0.27
GINS3-202ENST00000328514 LARP1BQ659C4 914 aaKnown RBP13.35□□□□□ -0.27
GINS3-202ENST00000328514 ZNF397Q8NF99 534 aaPredicted RBP13.35□□□□□ -0.27
GINS3-202ENST00000328514 JAKMIP1Q96N16 626 aaKnown RBP13.35□□□□□ -0.27
GINS3-202ENST00000328514 STAG3Q9UJ98 1225 aa13.35□□□□□ -0.27
GINS3-202ENST00000328514 FMN2Q9NZ56 1722 aa13.35□□□□□ -0.27
GINS3-202ENST00000328514 PLEKHG3A1L390 1219 aa13.35□□□□□ -0.27
GINS3-202ENST00000328514 VPS37CA5D8V6 355 aaPredicted RBP13.35□□□□□ -0.27
GINS3-202ENST00000328514 FOXO3O43524 673 aa13.35□□□□□ -0.27
GINS3-202ENST00000328514 FGD1P98174 961 aa13.35□□□□□ -0.27
GINS3-202ENST00000328514 TERF2Q15554 542 aa13.35□□□□□ -0.27
GINS3-202ENST00000328514 CWC27Q6UX04 472 aaKnown RBP13.35□□□□□ -0.27
GINS3-202ENST00000328514 NYAP1Q6ZVC0 841 aa13.35□□□□□ -0.27
GINS3-202ENST00000328514 ZNF771Q7L3S4 317 aaPredicted RBP13.35□□□□□ -0.27
GINS3-202ENST00000328514 CACTINQ8WUQ7 758 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms