RNA–Protein interactions for RNA: ENST00000327956.6

SCN5A-201, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-201ENST00000327956 STYK1Q6J9G0 422 aa22.95■■□□□ 1.26
SCN5A-201ENST00000327956 DPY19L2Q6NUT2 758 aa22.95■■□□□ 1.26
SCN5A-201ENST00000327956 GTF2E1P29083 439 aaPredicted RBP22.94■■□□□ 1.26
SCN5A-201ENST00000327956 TPTE2Q6XPS3 522 aa22.94■■□□□ 1.26
SCN5A-201ENST00000327956 MASTLQ96GX5 879 aa22.94■■□□□ 1.26
SCN5A-201ENST00000327956 NIP7Q9Y221 180 aaKnown RBP eCLIP22.94■■□□□ 1.26
SCN5A-201ENST00000327956 TIAM2Q8IVF5 1701 aa22.94■■□□□ 1.26
SCN5A-201ENST00000327956 GLTPD2A6NH11 291 aa22.93■■□□□ 1.26
SCN5A-201ENST00000327956 NFE2L2Q16236 605 aa22.93■■□□□ 1.26
SCN5A-201ENST00000327956 SMC1BQ8NDV3 1235 aa22.93■■□□□ 1.26
SCN5A-201ENST00000327956 LAMB4A4D0S4 1761 aa22.93■■□□□ 1.26
SCN5A-201ENST00000327956 COL11A2P13942 1736 aaPredicted RBP22.92■■□□□ 1.26
SCN5A-201ENST00000327956 VEGFAP15692 232 aaPredicted RBP22.92■■□□□ 1.26
SCN5A-201ENST00000327956 TAOK3Q9H2K8 898 aa22.92■■□□□ 1.26
SCN5A-201ENST00000327956 MIS18AQ9NYP9 233 aa22.92■■□□□ 1.26
SCN5A-201ENST00000327956 DLG5Q8TDM6 1919 aa22.91■■□□□ 1.26
SCN5A-201ENST00000327956 NFKBIEO00221 500 aa22.91■■□□□ 1.26
SCN5A-201ENST00000327956 SRGNP10124 158 aa22.91■■□□□ 1.26
SCN5A-201ENST00000327956 RALBP1Q15311 655 aa22.91■■□□□ 1.26
SCN5A-201ENST00000327956 ERFEQ4G0M1 354 aa22.91■■□□□ 1.26
SCN5A-201ENST00000327956 PRPF40BQ6NWY9 871 aaKnown RBP22.91■■□□□ 1.26
SCN5A-201ENST00000327956 KIF6Q6ZMV9 814 aa22.91■■□□□ 1.26
SCN5A-201ENST00000327956 CEP350Q5VT06 3117 aa22.91■■□□□ 1.26
SCN5A-201ENST00000327956 CCDC88AQ3V6T2 1871 aa22.9■■□□□ 1.26
SCN5A-201ENST00000327956 NPR1P16066 1061 aa22.89■■□□□ 1.25
SCN5A-201ENST00000327956 LTBP3Q9NS15 1303 aa22.88■■□□□ 1.25
SCN5A-201ENST00000327956 FAM177BA6PVY3 158 aa22.88■■□□□ 1.25
SCN5A-201ENST00000327956 NBPF26B4DH59 902 aa22.88■■□□□ 1.25
SCN5A-201ENST00000327956 NBPF10Q6P3W6 841 aaKnown RBP22.88■■□□□ 1.25
SCN5A-201ENST00000327956 NGEFQ8N5V2 710 aa22.88■■□□□ 1.25
SCN5A-201ENST00000327956 NBPF15Q8N660 670 aa22.88■■□□□ 1.25
SCN5A-201ENST00000327956 PLEKHF1Q96S99 279 aa22.88■■□□□ 1.25
SCN5A-201ENST00000327956 NYXQ9GZU5 481 aa22.88■■□□□ 1.25
SCN5A-201ENST00000327956 CACNA1SQ13698 1873 aa22.88■■□□□ 1.25
SCN5A-201ENST00000327956 KDM3BQ7LBC6 1761 aa22.87■■□□□ 1.25
SCN5A-201ENST00000327956 LMOD3Q0VAK6 560 aa22.87■■□□□ 1.25
SCN5A-201ENST00000327956 WDR90Q96KV7 1748 aa22.87■■□□□ 1.25
SCN5A-201ENST00000327956 CCDC93Q567U6 631 aa22.86■■□□□ 1.25
SCN5A-201ENST00000327956 RRP7AQ9Y3A4 280 aaKnown RBP22.86■■□□□ 1.25
SCN5A-201ENST00000327956 ARFGEF2Q9Y6D5 1785 aa22.86■■□□□ 1.25
SCN5A-201ENST00000327956 FER1L6Q2WGJ9 1857 aa22.85■■□□□ 1.25
SCN5A-201ENST00000327956 EIF4A1P60842 406 aaKnown RBP22.85■■□□□ 1.25
SCN5A-201ENST00000327956 TSPYL4Q9UJ04 414 aa22.85■■□□□ 1.25
SCN5A-201ENST00000327956 ERVV-1B6SEH8 477 aa22.84■■□□□ 1.25
SCN5A-201ENST00000327956 ALDH1B1P30837 517 aa22.84■■□□□ 1.25
SCN5A-201ENST00000327956 SLX4Q8IY92 1834 aa22.83■■□□□ 1.25
SCN5A-201ENST00000327956 DICER1Q9UPY3 1922 aaKnown RBP22.83■■□□□ 1.25
SCN5A-201ENST00000327956 MYL6BP14649 208 aa22.83■■□□□ 1.25
SCN5A-201ENST00000327956 PRELPP51888 382 aa22.83■■□□□ 1.25
SCN5A-201ENST00000327956 THUMPD2Q9BTF0 503 aaKnown RBP22.83■■□□□ 1.25
SCN5A-201ENST00000327956 ERBB4Q15303 1308 aa22.82■■□□□ 1.24
SCN5A-201ENST00000327956 MAP3K15Q6ZN16 1313 aa22.82■■□□□ 1.24
SCN5A-201ENST00000327956 RIPK4P57078 832 aa22.82■■□□□ 1.24
SCN5A-201ENST00000327956 HLFQ16534 295 aa22.81■■□□□ 1.24
SCN5A-201ENST00000327956 RTKN2Q8IZC4 609 aa22.81■■□□□ 1.24
SCN5A-201ENST00000327956 MYBBP1AQ9BQG0 1328 aaKnown RBP22.8■■□□□ 1.24
SCN5A-201ENST00000327956 KLRG2A4D1S0 409 aaPredicted RBP22.79■■□□□ 1.24
SCN5A-201ENST00000327956 WDR43Q15061 677 aaKnown RBP eCLIP22.79■■□□□ 1.24
SCN5A-201ENST00000327956 RPGRQ92834 1020 aaKnown RBP22.79■■□□□ 1.24
SCN5A-201ENST00000327956 ZBTB3Q9H5J0 574 aa22.79■■□□□ 1.24
SCN5A-201ENST00000327956 BABAM1Q9NWV8 329 aa22.79■■□□□ 1.24
SCN5A-201ENST00000327956 IQCA1LA6NCM1 817 aa22.78■■□□□ 1.24
SCN5A-201ENST00000327956 FKBP4Q02790 459 aaKnown RBP eCLIP22.78■■□□□ 1.24
SCN5A-201ENST00000327956 KLRG1Q96E93 195 aa22.78■■□□□ 1.24
SCN5A-201ENST00000327956 DDX10Q13206 875 aaKnown RBP22.77■■□□□ 1.24
SCN5A-201ENST00000327956 IFFO2Q5TF58 517 aa22.77■■□□□ 1.24
SCN5A-201ENST00000327956 DNAJC5GQ8N7S2 189 aa22.77■■□□□ 1.24
SCN5A-201ENST00000327956 TMX4Q9H1E5 349 aaPredicted RBP22.77■■□□□ 1.24
SCN5A-201ENST00000327956 NUP98P52948 1817 aa22.77■■□□□ 1.24
SCN5A-201ENST00000327956 IBTKQ9P2D0 1353 aaPredicted RBP22.76■■□□□ 1.23
SCN5A-201ENST00000327956 EIF2S2P20042 333 aaKnown RBP22.76■■□□□ 1.23
SCN5A-201ENST00000327956 GPTP24298 496 aa22.76■■□□□ 1.23
SCN5A-201ENST00000327956 PPP1R42Q7Z4L9 355 aa22.76■■□□□ 1.23
SCN5A-201ENST00000327956 TMPOP42166 694 aaKnown RBP22.75■■□□□ 1.23
SCN5A-201ENST00000327956 TTLL7Q6ZT98 887 aa22.75■■□□□ 1.23
SCN5A-201ENST00000327956 NUTM1Q86Y26 1132 aa22.75■■□□□ 1.23
SCN5A-201ENST00000327956 HTRA3P83110 453 aa22.74■■□□□ 1.23
SCN5A-201ENST00000327956 PARP10Q53GL7 1025 aa22.74■■□□□ 1.23
SCN5A-201ENST00000327956 CC2D2BQ6DHV5 1058 aa22.74■■□□□ 1.23
SCN5A-201ENST00000327956 C7orf43Q8WVR3 580 aa22.74■■□□□ 1.23
SCN5A-201ENST00000327956 DDNO94850 711 aaPredicted RBP22.73■■□□□ 1.23
SCN5A-201ENST00000327956 NEUROD2Q15784 382 aa22.73■■□□□ 1.23
SCN5A-201ENST00000327956 GRIPAP1Q4V328 841 aa22.73■■□□□ 1.23
SCN5A-201ENST00000327956 GIGYF2Q6Y7W6 1299 aaKnown RBP22.73■■□□□ 1.23
SCN5A-201ENST00000327956 RBM17Q96I25 401 aaKnown RBP22.73■■□□□ 1.23
SCN5A-201ENST00000327956 ZNF277Q9NRM2 450 aaPredicted RBP22.73■■□□□ 1.23
SCN5A-201ENST00000327956 CRY2Q49AN0 593 aa22.72■■□□□ 1.23
SCN5A-201ENST00000327956 CHADLQ6NUI6 762 aa22.72■■□□□ 1.23
SCN5A-201ENST00000327956 JDP2Q8WYK2 163 aa22.72■■□□□ 1.23
SCN5A-201ENST00000327956 ABCC12Q96J65 1359 aa22.72■■□□□ 1.23
SCN5A-201ENST00000327956 RIC1Q4ADV7 1423 aa22.72■■□□□ 1.23
SCN5A-201ENST00000327956 HSP90AB3PQ58FF7 597 aa22.71■■□□□ 1.23
SCN5A-201ENST00000327956 IARSP41252 1262 aaKnown RBP22.7■■□□□ 1.22
SCN5A-201ENST00000327956 CCDC146Q8IYE0 955 aa22.7■■□□□ 1.22
SCN5A-201ENST00000327956 RUNDC1Q96C34 613 aa22.7■■□□□ 1.22
SCN5A-201ENST00000327956 LAS1LQ9Y4W2 734 aaKnown RBP22.7■■□□□ 1.22
SCN5A-201ENST00000327956 UBN2Q6ZU65 1347 aa22.69■■□□□ 1.22
SCN5A-201ENST00000327956 POTECB2RU33 542 aa22.69■■□□□ 1.22
SCN5A-201ENST00000327956 SUSD4Q5VX71 490 aa22.69■■□□□ 1.22
SCN5A-201ENST00000327956 ZNF34Q8IZ26 560 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms