RNA–Protein interactions for RNA: ENST00000326597.6

GGA1-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 4

Gene GGA1, Length 946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-202ENST00000326597 FAM177BA6PVY3 158 aa20.41■□□□□ 0.86
GGA1-202ENST00000326597 OLFM4Q6UX06 510 aa20.41■□□□□ 0.86
GGA1-202ENST00000326597 NBPF5PQ86XG9 351 aaPredicted RBP20.41■□□□□ 0.86
GGA1-202ENST00000326597 CREBZFQ9NS37 354 aa20.41■□□□□ 0.86
GGA1-202ENST00000326597 TIAM2Q8IVF5 1701 aa20.41■□□□□ 0.86
GGA1-202ENST00000326597 PRKAR2BP31323 418 aa20.4■□□□□ 0.86
GGA1-202ENST00000326597 LTBP3Q9NS15 1303 aa20.4■□□□□ 0.86
GGA1-202ENST00000326597 DLEC1Q9Y238 1755 aa20.4■□□□□ 0.86
GGA1-202ENST00000326597 COL3A1P02461 1466 aaPredicted RBP20.39■□□□□ 0.85
GGA1-202ENST00000326597 UBR2Q8IWV8 1755 aa20.39■□□□□ 0.85
GGA1-202ENST00000326597 EAPPQ56P03 285 aaPredicted RBP20.38■□□□□ 0.85
GGA1-202ENST00000326597 MCM10Q7L590 875 aa20.38■□□□□ 0.85
GGA1-202ENST00000326597 ZNF277Q9NRM2 450 aaPredicted RBP20.38■□□□□ 0.85
GGA1-202ENST00000326597 ANKRD31Q8N7Z5 1873 aa20.37■□□□□ 0.85
GGA1-202ENST00000326597 COL11A2P13942 1736 aaPredicted RBP20.37■□□□□ 0.85
GGA1-202ENST00000326597 SOGA3Q5TF21 947 aa20.37■□□□□ 0.85
GGA1-202ENST00000326597 C7orf43Q8WVR3 580 aa20.37■□□□□ 0.85
GGA1-202ENST00000326597 CEMIPQ8WUJ3 1361 aa20.36■□□□□ 0.85
GGA1-202ENST00000326597 RSPH6AQ9H0K4 717 aa20.36■□□□□ 0.85
GGA1-202ENST00000326597 TAF1DQ9H5J8 278 aaPredicted RBP20.36■□□□□ 0.85
GGA1-202ENST00000326597 ZNF541Q9H0D2 1346 aa20.35■□□□□ 0.85
GGA1-202ENST00000326597 IQCA1LA6NCM1 817 aa20.35■□□□□ 0.85
GGA1-202ENST00000326597 NPR1P16066 1061 aa20.35■□□□□ 0.85
GGA1-202ENST00000326597 DCTN1Q14203 1278 aa20.35■□□□□ 0.85
GGA1-202ENST00000326597 CCDC93Q567U6 631 aa20.35■□□□□ 0.85
GGA1-202ENST00000326597 NIP7Q9Y221 180 aaKnown RBP eCLIP20.35■□□□□ 0.85
GGA1-202ENST00000326597 CLEC11AQ9Y240 323 aa20.35■□□□□ 0.85
GGA1-202ENST00000326597 SCN7AQ01118 1682 aa20.35■□□□□ 0.85
GGA1-202ENST00000326597 NBPF26B4DH59 902 aa20.34■□□□□ 0.85
GGA1-202ENST00000326597 FOXN1O15353 648 aa20.34■□□□□ 0.85
GGA1-202ENST00000326597 SNRPA1P09661 255 aaKnown RBP20.34■□□□□ 0.85
GGA1-202ENST00000326597 NBPF10Q6P3W6 841 aaKnown RBP20.34■□□□□ 0.85
GGA1-202ENST00000326597 LDHDQ86WU2 507 aa20.34■□□□□ 0.85
GGA1-202ENST00000326597 NBPF15Q8N660 670 aa20.34■□□□□ 0.85
GGA1-202ENST00000326597 ZNF652Q9Y2D9 606 aa20.34■□□□□ 0.85
GGA1-202ENST00000326597 SLX4Q8IY92 1834 aa20.33■□□□□ 0.85
GGA1-202ENST00000326597 CLEC4GQ6UXB4 293 aa20.33■□□□□ 0.85
GGA1-202ENST00000326597 TPTE2Q6XPS3 522 aa20.33■□□□□ 0.85
GGA1-202ENST00000326597 RTF1Q92541 710 aaKnown RBP20.33■□□□□ 0.85
GGA1-202ENST00000326597 CCDC88AQ3V6T2 1871 aa20.33■□□□□ 0.84
GGA1-202ENST00000326597 PASKQ96RG2 1323 aa20.32■□□□□ 0.84
GGA1-202ENST00000326597 U2AF1L5P0DN76 240 aaPredicted RBP20.32■□□□□ 0.84
GGA1-202ENST00000326597 VEGFBP49765 207 aa20.32■□□□□ 0.84
GGA1-202ENST00000326597 U2AF1Q01081 240 aaKnown RBP eCLIP20.32■□□□□ 0.84
GGA1-202ENST00000326597 FKBP4Q02790 459 aaKnown RBP eCLIP20.32■□□□□ 0.84
GGA1-202ENST00000326597 HLFQ16534 295 aa20.32■□□□□ 0.84
GGA1-202ENST00000326597 L3MBTL3Q96JM7 780 aaPredicted RBP20.32■□□□□ 0.84
GGA1-202ENST00000326597 CFAP53Q96M91 514 aa20.32■□□□□ 0.84
GGA1-202ENST00000326597 MIS18AQ9NYP9 233 aa20.32■□□□□ 0.84
GGA1-202ENST00000326597 CNTNAP1P78357 1384 aa20.32■□□□□ 0.84
GGA1-202ENST00000326597 GTF2E1P29083 439 aaPredicted RBP20.31■□□□□ 0.84
GGA1-202ENST00000326597 NGEFQ8N5V2 710 aa20.31■□□□□ 0.84
GGA1-202ENST00000326597 VIRMAQ69YN4 1812 aaKnown RBP20.3■□□□□ 0.84
GGA1-202ENST00000326597 TMEM88BA6NKF7 163 aa20.3■□□□□ 0.84
GGA1-202ENST00000326597 ITGBL1O95965 494 aaPredicted RBP20.3■□□□□ 0.84
GGA1-202ENST00000326597 HACL1Q9UJ83 578 aa20.3■□□□□ 0.84
GGA1-202ENST00000326597 FER1L6Q2WGJ9 1857 aa20.3■□□□□ 0.84
GGA1-202ENST00000326597 RNF123Q5XPI4 1314 aa20.29■□□□□ 0.84
GGA1-202ENST00000326597 KLRG2A4D1S0 409 aaPredicted RBP20.29■□□□□ 0.84
GGA1-202ENST00000326597 EPHX2P34913 555 aa20.29■□□□□ 0.84
GGA1-202ENST00000326597 MAP1SQ66K74 1059 aaPredicted RBP20.29■□□□□ 0.84
GGA1-202ENST00000326597 SYNE4Q8N205 404 aa20.29■□□□□ 0.84
GGA1-202ENST00000326597 NPC1L1Q9UHC9 1359 aa20.29■□□□□ 0.84
GGA1-202ENST00000326597 RTKN2Q8IZC4 609 aa20.28■□□□□ 0.84
GGA1-202ENST00000326597 AIDAQ96BJ3 306 aa20.28■□□□□ 0.84
GGA1-202ENST00000326597 NUDCQ9Y266 331 aa20.28■□□□□ 0.84
GGA1-202ENST00000326597 IARSP41252 1262 aaKnown RBP20.27■□□□□ 0.84
GGA1-202ENST00000326597 NUTM1Q86Y26 1132 aa20.27■□□□□ 0.84
GGA1-202ENST00000326597 SLC51AQ86UW1 340 aa20.26■□□□□ 0.83
GGA1-202ENST00000326597 CNTROBQ8N137 903 aa20.26■□□□□ 0.83
GGA1-202ENST00000326597 GJA3Q9Y6H8 435 aa20.26■□□□□ 0.83
GGA1-202ENST00000326597 SIPA1L3O60292 1781 aaPredicted RBP20.26■□□□□ 0.83
GGA1-202ENST00000326597 TCERG1O14776 1098 aaKnown RBP20.25■□□□□ 0.83
GGA1-202ENST00000326597 CTCFP49711 727 aaPredicted RBP20.25■□□□□ 0.83
GGA1-202ENST00000326597 FZD9O00144 591 aa20.24■□□□□ 0.83
GGA1-202ENST00000326597 ALDH1B1P30837 517 aa20.24■□□□□ 0.83
GGA1-202ENST00000326597 LBX1P52954 281 aa20.24■□□□□ 0.83
GGA1-202ENST00000326597 GPTP24298 496 aa20.23■□□□□ 0.83
GGA1-202ENST00000326597 PPP2R1AP30153 589 aa20.23■□□□□ 0.83
GGA1-202ENST00000326597 TAF7Q15545 349 aaPredicted RBP20.23■□□□□ 0.83
GGA1-202ENST00000326597 PNMA8AQ86V59 439 aaPredicted RBP20.23■□□□□ 0.83
GGA1-202ENST00000326597 JDP2Q8WYK2 163 aa20.23■□□□□ 0.83
GGA1-202ENST00000326597 ABT1Q9ULW3 272 aaKnown RBP20.23■□□□□ 0.83
GGA1-202ENST00000326597 RRP7AQ9Y3A4 280 aaKnown RBP20.23■□□□□ 0.83
GGA1-202ENST00000326597 ABCC12Q96J65 1359 aa20.22■□□□□ 0.83
GGA1-202ENST00000326597 FMR1Q06787 632 aaKnown RBP eCLIP20.22■□□□□ 0.83
GGA1-202ENST00000326597 PRDM10Q9NQV6 1147 aa20.22■□□□□ 0.83
GGA1-202ENST00000326597 WBP1LQ9NX94 342 aa20.22■□□□□ 0.83
GGA1-202ENST00000326597 DICER1Q9UPY3 1922 aaKnown RBP20.21■□□□□ 0.83
GGA1-202ENST00000326597 DEFB115Q30KQ5 88 aa20.21■□□□□ 0.83
GGA1-202ENST00000326597 TTLL7Q6ZT98 887 aa20.21■□□□□ 0.83
GGA1-202ENST00000326597 GPC2Q8N158 579 aa20.21■□□□□ 0.83
GGA1-202ENST00000326597 BCORQ6W2J9 1755 aa20.21■□□□□ 0.83
GGA1-202ENST00000326597 CACNA1SQ13698 1873 aa20.2■□□□□ 0.82
GGA1-202ENST00000326597 MYL6BP14649 208 aa20.2■□□□□ 0.82
GGA1-202ENST00000326597 GRM1Q13255 1194 aa20.2■□□□□ 0.82
GGA1-202ENST00000326597 RPGRQ92834 1020 aaKnown RBP20.2■□□□□ 0.82
GGA1-202ENST00000326597 ZBTB3Q9H5J0 574 aa20.2■□□□□ 0.82
GGA1-202ENST00000326597 EIF6P56537 245 aaKnown RBP20.19■□□□□ 0.82
GGA1-202ENST00000326597 CRY2Q49AN0 593 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms