RNA–Protein interactions for RNA: ENST00000325438.12

PACS2-201, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACS2, Length 3,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-201ENST00000325438 PA2G4Q9UQ80 394 aaKnown RBP28.24■■■□□ 2.11
PACS2-201ENST00000325438 G3BP1Q13283 466 aaKnown RBP eCLIP28.23■■■□□ 2.11
PACS2-201ENST00000325438 MYOM2P54296 1465 aa28.23■■■□□ 2.11
PACS2-201ENST00000325438 ZSCAN25Q6NSZ9 544 aa28.23■■■□□ 2.11
PACS2-201ENST00000325438 ISM2Q6H9L7 571 aa28.23■■■□□ 2.11
PACS2-201ENST00000325438 WASLO00401 505 aaPredicted RBP28.22■■■□□ 2.11
PACS2-201ENST00000325438 GLRX3O76003 335 aaKnown RBP28.22■■■□□ 2.11
PACS2-201ENST00000325438 PTH1RQ03431 593 aa28.22■■■□□ 2.11
PACS2-201ENST00000325438 BIN1O00499 593 aa28.22■■■□□ 2.11
PACS2-201ENST00000325438 NPATQ14207 1427 aa28.22■■■□□ 2.11
PACS2-201ENST00000325438 USHBP1Q8N6Y0 703 aa28.22■■■□□ 2.11
PACS2-201ENST00000325438 SH2B1Q9NRF2 756 aaPredicted RBP28.22■■■□□ 2.11
PACS2-201ENST00000325438 PAXBP1Q9Y5B6 917 aa28.22■■■□□ 2.11
PACS2-201ENST00000325438 RBM8AQ9Y5S9 174 aaKnown RBP28.22■■■□□ 2.11
PACS2-201ENST00000325438 ME3Q16798 604 aa28.21■■■□□ 2.11
PACS2-201ENST00000325438 RGS12O14924 1447 aa28.21■■■□□ 2.11
PACS2-201ENST00000325438 RAD50Q92878 1312 aa28.21■■■□□ 2.11
PACS2-201ENST00000325438 ZNF75DP51815 510 aa28.21■■■□□ 2.11
PACS2-201ENST00000325438 LARP1Q6PKG0 1096 aaKnown RBP28.21■■■□□ 2.11
PACS2-201ENST00000325438 YTHDC2Q9H6S0 1430 aaKnown RBP28.21■■■□□ 2.11
PACS2-201ENST00000325438 CACTINQ8WUQ7 758 aaKnown RBP28.2■■■□□ 2.11
PACS2-201ENST00000325438 SPTLC3Q9NUV7 552 aa28.2■■■□□ 2.11
PACS2-201ENST00000325438 OSBPL3Q9H4L5 887 aa28.2■■■□□ 2.1
PACS2-201ENST00000325438 HSP90AB4PQ58FF6 505 aa28.2■■■□□ 2.1
PACS2-201ENST00000325438 DDX19AQ9NUU7 478 aaKnown RBP28.19■■■□□ 2.1
PACS2-201ENST00000325438 MRVI1Q9Y6F6 885 aa28.19■■■□□ 2.1
PACS2-201ENST00000325438 DNAJC2Q99543 621 aaKnown RBP28.19■■■□□ 2.1
PACS2-201ENST00000325438 FAM135BQ49AJ0 1406 aa28.18■■■□□ 2.1
PACS2-201ENST00000325438 PI4KAP2A4QPH2 592 aa28.18■■■□□ 2.1
PACS2-201ENST00000325438 CCDC69A6NI79 296 aa28.18■■■□□ 2.1
PACS2-201ENST00000325438 PI4KAP1Q8N8J0 262 aa28.18■■■□□ 2.1
PACS2-201ENST00000325438 TEFQ10587 303 aa28.18■■■□□ 2.1
PACS2-201ENST00000325438 ATP7AQ04656 1500 aa28.18■■■□□ 2.1
PACS2-201ENST00000325438 NR1I2O75469 434 aa28.18■■■□□ 2.1
PACS2-201ENST00000325438 SKIDA1Q1XH10 827 aa28.18■■■□□ 2.1
PACS2-201ENST00000325438 SPHKAPQ2M3C7 1700 aa28.18■■■□□ 2.1
PACS2-201ENST00000325438 NLRP6P59044 892 aa28.16■■■□□ 2.1
PACS2-201ENST00000325438 SOS1Q07889 1333 aaPredicted RBP28.16■■■□□ 2.1
PACS2-201ENST00000325438 TPM4P67936 248 aa28.16■■■□□ 2.1
PACS2-201ENST00000325438 TEX35Q5T0J7 233 aa28.16■■■□□ 2.1
PACS2-201ENST00000325438 TAF3Q5VWG9 929 aa28.16■■■□□ 2.1
PACS2-201ENST00000325438 TIGD1Q96MW7 591 aa28.16■■■□□ 2.1
PACS2-201ENST00000325438 NBPF7P0C2Y1 421 aaPredicted RBP28.15■■■□□ 2.1
PACS2-201ENST00000325438 FAM227BQ96M60 508 aa28.15■■■□□ 2.1
PACS2-201ENST00000325438 PIK3R4Q99570 1358 aa28.15■■■□□ 2.1
PACS2-201ENST00000325438 CCT2P78371 535 aaKnown RBP28.15■■■□□ 2.1
PACS2-201ENST00000325438 STK11IPQ8N1F8 1099 aa28.15■■■□□ 2.1
PACS2-201ENST00000325438 NOL10Q9BSC4 688 aaKnown RBP28.15■■■□□ 2.1
PACS2-201ENST00000325438 ZFYVE9O95405 1425 aa28.15■■■□□ 2.1
PACS2-201ENST00000325438 MED14O60244 1454 aa28.15■■■□□ 2.1
PACS2-201ENST00000325438 LRRC7Q96NW7 1537 aa28.14■■■□□ 2.1
PACS2-201ENST00000325438 UBXN4Q92575 508 aa28.14■■■□□ 2.1
PACS2-201ENST00000325438 SHPRHQ149N8 1683 aa28.14■■■□□ 2.1
PACS2-201ENST00000325438 URI1O94763 535 aaPredicted RBP28.14■■■□□ 2.09
PACS2-201ENST00000325438 ZNF397Q8NF99 534 aaPredicted RBP28.14■■■□□ 2.09
PACS2-201ENST00000325438 BRF1Q92994 677 aa28.14■■■□□ 2.09
PACS2-201ENST00000325438 USP44Q9H0E7 712 aa28.14■■■□□ 2.09
PACS2-201ENST00000325438 HYPKQ9NX55 129 aa28.14■■■□□ 2.09
PACS2-201ENST00000325438 ABCC1P33527 1531 aa28.13■■■□□ 2.09
PACS2-201ENST00000325438 TMC6Q7Z403 805 aa28.13■■■□□ 2.09
PACS2-201ENST00000325438 PDILTQ8N807 584 aa28.13■■■□□ 2.09
PACS2-201ENST00000325438 ST7Q9NRC1 585 aa28.13■■■□□ 2.09
PACS2-201ENST00000325438 ECHDC1Q9NTX5 307 aa28.13■■■□□ 2.09
PACS2-201ENST00000325438 JAK2O60674 1132 aa28.13■■■□□ 2.09
PACS2-201ENST00000325438 CCAR1Q8IX12 1150 aaKnown RBP28.13■■■□□ 2.09
PACS2-201ENST00000325438 AOPEPQ8N6M6 819 aa28.13■■■□□ 2.09
PACS2-201ENST00000325438 TPCN1Q9ULQ1 816 aa28.13■■■□□ 2.09
PACS2-201ENST00000325438 SNW1Q13573 536 aaKnown RBP28.13■■■□□ 2.09
PACS2-201ENST00000325438 SYT10Q6XYQ8 523 aa28.13■■■□□ 2.09
PACS2-201ENST00000325438 ATP10DQ9P241 1426 aa28.12■■■□□ 2.09
PACS2-201ENST00000325438 CEP57L1Q8IYX8 460 aa28.12■■■□□ 2.09
PACS2-201ENST00000325438 ARGLU1Q9NWB6 273 aaPredicted RBP28.12■■■□□ 2.09
PACS2-201ENST00000325438 CREB3L3Q68CJ9 461 aa28.12■■■□□ 2.09
PACS2-201ENST00000325438 NPHP3Q7Z494 1330 aa28.11■■■□□ 2.09
PACS2-201ENST00000325438 LEO1Q8WVC0 666 aaPredicted RBP28.1■■■□□ 2.09
PACS2-201ENST00000325438 LSG1Q9H089 658 aaKnown RBP28.1■■■□□ 2.09
PACS2-201ENST00000325438 VPS53Q5VIR6 699 aa28.1■■■□□ 2.09
PACS2-201ENST00000325438 RPAP1Q9BWH6 1393 aaPredicted RBP28.1■■■□□ 2.09
PACS2-201ENST00000325438 USP27XA6NNY8 438 aa28.1■■■□□ 2.09
PACS2-201ENST00000325438 GNAT3A8MTJ3 354 aa28.1■■■□□ 2.09
PACS2-201ENST00000325438 SLU7O95391 586 aaKnown RBP28.09■■■□□ 2.09
PACS2-201ENST00000325438 NMIQ13287 307 aaPredicted RBP28.09■■■□□ 2.09
PACS2-201ENST00000325438 ERCC6LQ2NKX8 1250 aa28.09■■■□□ 2.09
PACS2-201ENST00000325438 HSP90AA4PQ58FG1 418 aa28.09■■■□□ 2.09
PACS2-201ENST00000325438 CREBRFQ8IUR6 639 aa28.09■■■□□ 2.09
PACS2-201ENST00000325438 FSIP1Q8NA03 581 aa28.09■■■□□ 2.09
PACS2-201ENST00000325438 SFPQP23246 707 aaKnown RBP eCLIP28.09■■■□□ 2.092e-7■■■□□ 15
PACS2-201ENST00000325438 CFAP45Q9UL16 551 aa28.09■■■□□ 2.09
PACS2-201ENST00000325438 CCDC144BQ3MJ40 725 aa28.09■■■□□ 2.09
PACS2-201ENST00000325438 CCDC144CPQ8IYA2 1237 aa28.09■■■□□ 2.09
PACS2-201ENST00000325438 NAT10Q9H0A0 1025 aaKnown RBP28.09■■■□□ 2.09
PACS2-201ENST00000325438 CTNNA3Q9UI47 895 aa28.09■■■□□ 2.09
PACS2-201ENST00000325438 ANKRD1Q15327 319 aa28.08■■■□□ 2.09
PACS2-201ENST00000325438 TULP4Q9NRJ4 1543 aa28.08■■■□□ 2.09
PACS2-201ENST00000325438 TMCO3Q6UWJ1 677 aa28.07■■■□□ 2.08
PACS2-201ENST00000325438 ZSWIM4Q9H7M6 989 aa28.07■■■□□ 2.08
PACS2-201ENST00000325438 DNAI1Q9UI46 699 aa28.07■■■□□ 2.08
PACS2-201ENST00000325438 NDUFB9Q9Y6M9 179 aa28.07■■■□□ 2.08
PACS2-201ENST00000325438 ARHGAP29Q52LW3 1261 aa28.07■■■□□ 2.08
PACS2-201ENST00000325438 KIF24Q5T7B8 1368 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms