RNA–Protein interactions for RNA: ENST00000324068.1

CAPN6-201, Transcript of calpain 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN6, Length 3,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6-201ENST00000324068 RXRBP28702 533 aa7.52□□□□□ -1.21
CAPN6-201ENST00000324068 TSR2Q969E8 191 aaKnown RBP7.52□□□□□ -1.21
CAPN6-201ENST00000324068 PTPRCP08575 1304 aa7.52□□□□□ -1.21
CAPN6-201ENST00000324068 BTBD11A6QL63 1104 aa7.51□□□□□ -1.21
CAPN6-201ENST00000324068 EXOSC9Q06265 439 aaKnown RBP7.51□□□□□ -1.21
CAPN6-201ENST00000324068 FAM196AQ6ZSG2 479 aa7.51□□□□□ -1.21
CAPN6-201ENST00000324068 KRT27Q7Z3Y8 459 aa7.51□□□□□ -1.21
CAPN6-201ENST00000324068 TSPYL6Q8N831 410 aa7.51□□□□□ -1.21
CAPN6-201ENST00000324068 COL11A2P13942 1736 aaPredicted RBP7.51□□□□□ -1.21
CAPN6-201ENST00000324068 PLSCR1O15162 318 aa7.51□□□□□ -1.21
CAPN6-201ENST00000324068 FAM43BQ6ZT52 329 aaPredicted RBP7.51□□□□□ -1.21
CAPN6-201ENST00000324068 NFATC2IPQ8NCF5 419 aa7.51□□□□□ -1.21
CAPN6-201ENST00000324068 ADCY9O60503 1353 aa7.51□□□□□ -1.21
CAPN6-201ENST00000324068 KCNQ3O43525 872 aa7.51□□□□□ -1.21
CAPN6-201ENST00000324068 CERS3Q8IU89 383 aa7.51□□□□□ -1.21
CAPN6-201ENST00000324068 TSPYL4Q9UJ04 414 aa7.51□□□□□ -1.21
CAPN6-201ENST00000324068 HDAC5Q9UQL6 1122 aa7.51□□□□□ -1.21
CAPN6-201ENST00000324068 SOCS7O14512 581 aa7.5□□□□□ -1.21
CAPN6-201ENST00000324068 RC3H1Q5TC82 1133 aaKnown RBP7.5□□□□□ -1.21
CAPN6-201ENST00000324068 SMARCC1Q92922 1105 aaPredicted RBP7.5□□□□□ -1.21
CAPN6-201ENST00000324068 FMNL2Q96PY5 1086 aa7.5□□□□□ -1.21
CAPN6-201ENST00000324068 TMOD3Q9NYL9 352 aa7.5□□□□□ -1.21
CAPN6-201ENST00000324068 KIF16BQ96L93 1317 aa7.5□□□□□ -1.21
CAPN6-201ENST00000324068 CABP4P57796 275 aa7.5□□□□□ -1.21
CAPN6-201ENST00000324068 TWISTNBQ3B726 338 aaPredicted RBP7.5□□□□□ -1.21
CAPN6-201ENST00000324068 ZNF496Q96IT1 587 aaPredicted RBP7.5□□□□□ -1.21
CAPN6-201ENST00000324068 PSMD1Q99460 953 aa7.5□□□□□ -1.21
CAPN6-201ENST00000324068 UTYO14607 1347 aa7.5□□□□□ -1.21
CAPN6-201ENST00000324068 CYP19A1P11511 503 aaPredicted RBP7.49□□□□□ -1.21
CAPN6-201ENST00000324068 RRP1P56182 461 aaKnown RBP7.49□□□□□ -1.21
CAPN6-201ENST00000324068 TEFQ10587 303 aa7.49□□□□□ -1.21
CAPN6-201ENST00000324068 GSE1Q14687 1217 aa7.49□□□□□ -1.21
CAPN6-201ENST00000324068 RCAN3Q9UKA8 241 aa7.49□□□□□ -1.21
CAPN6-201ENST00000324068 SLC27A3Q5K4L6 730 aa7.49□□□□□ -1.21
CAPN6-201ENST00000324068 TEX13AQ9BXU3 409 aaPredicted RBP7.49□□□□□ -1.21
CAPN6-201ENST00000324068 SNRPA1P09661 255 aaKnown RBP7.49□□□□□ -1.21
CAPN6-201ENST00000324068 TICAM2Q86XR7 235 aa7.49□□□□□ -1.21
CAPN6-201ENST00000324068 MYCNP04198 464 aaPredicted RBP7.48□□□□□ -1.21
CAPN6-201ENST00000324068 PDE3AQ14432 1141 aa7.48□□□□□ -1.21
CAPN6-201ENST00000324068 INTS5Q6P9B9 1019 aaKnown RBP7.48□□□□□ -1.21
CAPN6-201ENST00000324068 SSH1Q8WYL5 1049 aa7.48□□□□□ -1.21
CAPN6-201ENST00000324068 ATXN8OSP0DMR3 200 aa7.48□□□□□ -1.21
CAPN6-201ENST00000324068 ASAP1Q9ULH1 1129 aa7.48□□□□□ -1.21
CAPN6-201ENST00000324068 PRIM1P49642 420 aaKnown RBP7.48□□□□□ -1.21
CAPN6-201ENST00000324068 KRT24Q2M2I5 525 aa7.48□□□□□ -1.21
CAPN6-201ENST00000324068 PTF1AQ7RTS3 328 aa7.48□□□□□ -1.21
CAPN6-201ENST00000324068 DDX21Q9NR30 783 aaKnown RBP eCLIP7.48□□□□□ -1.21
CAPN6-201ENST00000324068 NBPF26B4DH59 902 aa7.47□□□□□ -1.21
CAPN6-201ENST00000324068 ITPK1Q13572 414 aa7.47□□□□□ -1.21
CAPN6-201ENST00000324068 NBPF14Q5TI25 921 aa7.47□□□□□ -1.21
CAPN6-201ENST00000324068 NBPF10Q6P3W6 841 aaKnown RBP7.47□□□□□ -1.21
CAPN6-201ENST00000324068 NBPF15Q8N660 670 aa7.47□□□□□ -1.21
CAPN6-201ENST00000324068 KCNQ2O43526 872 aa7.47□□□□□ -1.21
CAPN6-201ENST00000324068 NEUROD2Q15784 382 aa7.47□□□□□ -1.21
CAPN6-201ENST00000324068 INTS3Q68E01 1043 aaKnown RBP7.47□□□□□ -1.21
CAPN6-201ENST00000324068 AKT1S1Q96B36 256 aa7.47□□□□□ -1.21
CAPN6-201ENST00000324068 SPEF2Q9C093 1822 aa7.46□□□□□ -1.21
CAPN6-201ENST00000324068 HMGB2P26583 209 aaKnown RBP7.46□□□□□ -1.21
CAPN6-201ENST00000324068 CCDC125Q86Z20 511 aa7.46□□□□□ -1.21
CAPN6-201ENST00000324068 DDX54Q8TDD1 881 aaKnown RBP7.46□□□□□ -1.21
CAPN6-201ENST00000324068 PRAMEF22A3QJZ6 481 aa7.46□□□□□ -1.22
CAPN6-201ENST00000324068 CCDC30Q5VVM6 783 aa7.46□□□□□ -1.22
CAPN6-201ENST00000324068 LINC00116Q8NCU8 138 aa7.46□□□□□ -1.22
CAPN6-201ENST00000324068 CAMKK2Q96RR4 588 aa7.46□□□□□ -1.22
CAPN6-201ENST00000324068 PRDM4Q9UKN5 801 aa7.46□□□□□ -1.22
CAPN6-201ENST00000324068 LOC102724428A0A0B4J2F2 783 aa7.46□□□□□ -1.22
CAPN6-201ENST00000324068 CLGNO14967 610 aa7.46□□□□□ -1.22
CAPN6-201ENST00000324068 SIK1P57059 783 aa7.46□□□□□ -1.22
CAPN6-201ENST00000324068 PROM2Q8N271 834 aa7.46□□□□□ -1.22
CAPN6-201ENST00000324068 COL4A1P02462 1669 aa7.45□□□□□ -1.22
CAPN6-201ENST00000324068 IL6STP40189 918 aaPredicted RBP7.45□□□□□ -1.22
CAPN6-201ENST00000324068 EIF5P55010 431 aaKnown RBP7.45□□□□□ -1.22
CAPN6-201ENST00000324068 HYPKQ9NX55 129 aa7.45□□□□□ -1.22
CAPN6-201ENST00000324068 MIS18AQ9NYP9 233 aa7.45□□□□□ -1.22
CAPN6-201ENST00000324068 DBF4Q9UBU7 674 aaPredicted RBP7.45□□□□□ -1.22
CAPN6-201ENST00000324068 HMGB1P09429 215 aaKnown RBP7.45□□□□□ -1.22
CAPN6-201ENST00000324068 SLC39A6Q13433 755 aa7.45□□□□□ -1.22
CAPN6-201ENST00000324068 BCAR3O75815 825 aa7.44□□□□□ -1.22
CAPN6-201ENST00000324068 TRIM27P14373 513 aa7.44□□□□□ -1.22
CAPN6-201ENST00000324068 PDCL3Q9H2J4 239 aa7.44□□□□□ -1.22
CAPN6-201ENST00000324068 LRRC4BQ9NT99 713 aa7.44□□□□□ -1.22
CAPN6-201ENST00000324068 PSME4Q14997 1843 aa7.44□□□□□ -1.22
CAPN6-201ENST00000324068 ARFGEF1Q9Y6D6 1849 aa7.44□□□□□ -1.22
CAPN6-201ENST00000324068 ERVV-1B6SEH8 477 aa7.44□□□□□ -1.22
CAPN6-201ENST00000324068 TRIM28Q13263 835 aaKnown RBP7.44□□□□□ -1.22
CAPN6-201ENST00000324068 PROSER3Q2NL68 480 aa7.44□□□□□ -1.22
CAPN6-201ENST00000324068 ATF7IPQ6VMQ6 1270 aa7.44□□□□□ -1.22
CAPN6-201ENST00000324068 USP16Q9Y5T5 823 aa7.44□□□□□ -1.22
CAPN6-201ENST00000324068 CLSTN1O94985 981 aa7.44□□□□□ -1.22
CAPN6-201ENST00000324068 TTC5Q8N0Z6 440 aa7.44□□□□□ -1.22
CAPN6-201ENST00000324068 CHPF2Q9P2E5 772 aa7.44□□□□□ -1.22
CAPN6-201ENST00000324068 CASP7P55210 303 aa7.43□□□□□ -1.22
CAPN6-201ENST00000324068 HDGFL1Q5TGJ6 251 aa7.43□□□□□ -1.22
CAPN6-201ENST00000324068 CWC22Q9HCG8 908 aaKnown RBP7.43□□□□□ -1.22
CAPN6-201ENST00000324068 FLIIQ13045 1269 aa7.43□□□□□ -1.22
CAPN6-201ENST00000324068 IPO9Q96P70 1041 aaKnown RBP7.43□□□□□ -1.22
CAPN6-201ENST00000324068 RTL9Q8NET4 1388 aa7.43□□□□□ -1.22
CAPN6-201ENST00000324068 BEND3Q5T5X7 828 aa7.43□□□□□ -1.22
CAPN6-201ENST00000324068 CCDC87Q9NVE4 849 aa7.43□□□□□ -1.22
CAPN6-201ENST00000324068 DOCK2Q92608 1830 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms