RNA–Protein interactions for RNA: ENST00000323441.10

HIF1A-201, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-201ENST00000323441 NFIXQ14938 502 aa4.34□□□□□ -1.71
HIF1A-201ENST00000323441 CIAPIN1Q6FI81 312 aa4.34□□□□□ -1.71
HIF1A-201ENST00000323441 REM2Q8IYK8 340 aaPredicted RBP4.34□□□□□ -1.71
HIF1A-201ENST00000323441 ZIC5Q96T25 663 aa4.34□□□□□ -1.71
HIF1A-201ENST00000323441 NARFQ9UHQ1 456 aa4.34□□□□□ -1.71
HIF1A-201ENST00000323441 COLQQ9Y215 455 aaPredicted RBP4.34□□□□□ -1.71
HIF1A-201ENST00000323441 GPR153Q6NV75 609 aa4.34□□□□□ -1.71
HIF1A-201ENST00000323441 C2CD5Q86YS7 1000 aa4.34□□□□□ -1.71
HIF1A-201ENST00000323441 RNF186Q9NXI6 227 aa4.34□□□□□ -1.71
HIF1A-201ENST00000323441 FLT4P35916 1363 aa4.34□□□□□ -1.71
HIF1A-201ENST00000323441 ANKRD36CQ5JPF3 1778 aa4.34□□□□□ -1.72
HIF1A-201ENST00000323441 CRKLP46109 303 aaKnown RBP4.34□□□□□ -1.72
HIF1A-201ENST00000323441 FKBP4Q02790 459 aaKnown RBP eCLIP4.34□□□□□ -1.72
HIF1A-201ENST00000323441 BRIP1Q9BX63 1249 aa4.34□□□□□ -1.72
HIF1A-201ENST00000323441 TMOD3Q9NYL9 352 aa4.34□□□□□ -1.72
HIF1A-201ENST00000323441 SLC17A8Q8NDX2 589 aa4.33□□□□□ -1.72
HIF1A-201ENST00000323441 RAPGEF4Q8WZA2 1011 aa4.33□□□□□ -1.72
HIF1A-201ENST00000323441 MKI67P46013 3256 aaKnown RBP4.33□□□□□ -1.72
HIF1A-201ENST00000323441 COL2A1P02458 1487 aaPredicted RBP4.33□□□□□ -1.72
HIF1A-201ENST00000323441 ZNF609O15014 1411 aa4.33□□□□□ -1.72
HIF1A-201ENST00000323441 H0YIN7 160 aa4.33□□□□□ -1.72
HIF1A-201ENST00000323441 SOX12O15370 315 aa4.33□□□□□ -1.72
HIF1A-201ENST00000323441 ATXN8OSP0DMR3 200 aa4.33□□□□□ -1.72
HIF1A-201ENST00000323441 LAMB2P55268 1798 aa4.33□□□□□ -1.72
HIF1A-201ENST00000323441 COL15A1P39059 1388 aa4.33□□□□□ -1.72
HIF1A-201ENST00000323441 CDHR2Q9BYE9 1310 aa4.33□□□□□ -1.72
HIF1A-201ENST00000323441 ALPK3Q96L96 1907 aa4.33□□□□□ -1.72
HIF1A-201ENST00000323441 A0A1W2PPC1 479 aa4.33□□□□□ -1.72
HIF1A-201ENST00000323441 SERPINB2P05120 415 aa4.33□□□□□ -1.72
HIF1A-201ENST00000323441 KCNA4P22459 653 aa4.33□□□□□ -1.72
HIF1A-201ENST00000323441 FBXO46Q6PJ61 603 aaPredicted RBP4.33□□□□□ -1.72
HIF1A-201ENST00000323441 C21orf2O43822 256 aa4.32□□□□□ -1.72
HIF1A-201ENST00000323441 SRGNP10124 158 aa4.32□□□□□ -1.72
HIF1A-201ENST00000323441 CACNB1Q02641 598 aaPredicted RBP4.32□□□□□ -1.72
HIF1A-201ENST00000323441 AKAP4Q5JQC9 854 aa4.32□□□□□ -1.72
HIF1A-201ENST00000323441 CFAP44Q96MT7 982 aa4.32□□□□□ -1.72
HIF1A-201ENST00000323441 PSMD1Q99460 953 aa4.32□□□□□ -1.72
HIF1A-201ENST00000323441 TRAF5O00463 557 aa4.32□□□□□ -1.72
HIF1A-201ENST00000323441 SLC10A3P09131 477 aa4.32□□□□□ -1.72
HIF1A-201ENST00000323441 ZC3H15Q8WU90 426 aaKnown RBP4.32□□□□□ -1.72
HIF1A-201ENST00000323441 COL25A1Q9BXS0 654 aaPredicted RBP4.32□□□□□ -1.72
HIF1A-201ENST00000323441 ZNF219Q9P2Y4 722 aaPredicted RBP4.32□□□□□ -1.72
HIF1A-201ENST00000323441 RNF123Q5XPI4 1314 aa4.32□□□□□ -1.72
HIF1A-201ENST00000323441 PDE6BP35913 854 aa4.32□□□□□ -1.72
HIF1A-201ENST00000323441 USPL1Q5W0Q7 1092 aa4.32□□□□□ -1.72
HIF1A-201ENST00000323441 INTS3Q68E01 1043 aaKnown RBP4.32□□□□□ -1.72
HIF1A-201ENST00000323441 PRDM6Q9NQX0 595 aa4.32□□□□□ -1.72
HIF1A-201ENST00000323441 SPG7Q9UQ90 795 aa4.32□□□□□ -1.72
HIF1A-201ENST00000323441 POLR2AP24928 1970 aaKnown RBP4.31□□□□□ -1.72
HIF1A-201ENST00000323441 RGL2O15211 777 aa4.31□□□□□ -1.72
HIF1A-201ENST00000323441 IFNL2Q8IZJ0 200 aa4.31□□□□□ -1.72
HIF1A-201ENST00000323441 USHBP1Q8N6Y0 703 aa4.31□□□□□ -1.72
HIF1A-201ENST00000323441 COL4A1P02462 1669 aa4.31□□□□□ -1.72
HIF1A-201ENST00000323441 SYNGAP1Q96PV0 1343 aa4.31□□□□□ -1.72
HIF1A-201ENST00000323441 TAF1P21675 1872 aa4.31□□□□□ -1.72
HIF1A-201ENST00000323441 EAPPQ56P03 285 aaPredicted RBP4.31□□□□□ -1.72
HIF1A-201ENST00000323441 PRPF40BQ6NWY9 871 aaKnown RBP4.31□□□□□ -1.72
HIF1A-201ENST00000323441 CNKSR1Q969H4 720 aa4.31□□□□□ -1.72
HIF1A-201ENST00000323441 ARMC5Q96C12 935 aa4.31□□□□□ -1.72
HIF1A-201ENST00000323441 DUOX1Q9NRD9 1551 aa4.31□□□□□ -1.72
HIF1A-201ENST00000323441 PRR5LQ6MZQ0 368 aa4.3□□□□□ -1.72
HIF1A-201ENST00000323441 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.3□□□□□ -1.72
HIF1A-201ENST00000323441 CSRNP1Q96S65 589 aa4.3□□□□□ -1.72
HIF1A-201ENST00000323441 BRCA2P51587 3418 aa4.3□□□□□ -1.72
HIF1A-201ENST00000323441 UNC80Q8N2C7 3258 aa4.3□□□□□ -1.72
HIF1A-201ENST00000323441 CYP19A1P11511 503 aaPredicted RBP4.3□□□□□ -1.72
HIF1A-201ENST00000323441 CCDC93Q567U6 631 aa4.3□□□□□ -1.72
HIF1A-201ENST00000323441 VPS33BQ9H267 617 aa4.3□□□□□ -1.72
HIF1A-201ENST00000323441 POTEFA5A3E0 1075 aa4.3□□□□□ -1.72
HIF1A-201ENST00000323441 MYCNP04198 464 aaPredicted RBP4.3□□□□□ -1.72
HIF1A-201ENST00000323441 IARSP41252 1262 aaKnown RBP4.3□□□□□ -1.72
HIF1A-201ENST00000323441 CCDC102AQ96A19 550 aa4.3□□□□□ -1.72
HIF1A-201ENST00000323441 MASTLQ96GX5 879 aa4.3□□□□□ -1.72
HIF1A-201ENST00000323441 KIF23Q02241 960 aaPredicted RBP4.29□□□□□ -1.72
HIF1A-201ENST00000323441 RGMBQ6NW40 437 aa4.29□□□□□ -1.72
HIF1A-201ENST00000323441 RTKN2Q8IZC4 609 aa4.29□□□□□ -1.72
HIF1A-201ENST00000323441 LTV1Q96GA3 475 aaPredicted RBP4.29□□□□□ -1.72
HIF1A-201ENST00000323441 ADARB2Q9NS39 739 aaKnown RBP4.29□□□□□ -1.72
HIF1A-201ENST00000323441 CELF2O95319 508 aaKnown RBP4.29□□□□□ -1.72
HIF1A-201ENST00000323441 PLA2G5P39877 138 aa4.29□□□□□ -1.72
HIF1A-201ENST00000323441 EPS15P42566 896 aa4.29□□□□□ -1.72
HIF1A-201ENST00000323441 UBE2Q1Q7Z7E8 422 aa4.29□□□□□ -1.72
HIF1A-201ENST00000323441 GPRC5DQ9NZD1 345 aa4.29□□□□□ -1.72
HIF1A-201ENST00000323441 STXBP5LQ9Y2K9 1186 aa4.29□□□□□ -1.72
HIF1A-201ENST00000323441 ARIH1Q9Y4X5 557 aaPredicted RBP4.29□□□□□ -1.72
HIF1A-201ENST00000323441 RAB3GAP2Q9H2M9 1393 aa4.29□□□□□ -1.72
HIF1A-201ENST00000323441 TM4SF4P48230 202 aa4.29□□□□□ -1.72
HIF1A-201ENST00000323441 EIF5P55010 431 aaKnown RBP4.29□□□□□ -1.72
HIF1A-201ENST00000323441 GRIPAP1Q4V328 841 aa4.29□□□□□ -1.72
HIF1A-201ENST00000323441 HSP90AB2PQ58FF8 381 aa4.29□□□□□ -1.72
HIF1A-201ENST00000323441 HDGFL2Q7Z4V5 671 aaPredicted RBP4.29□□□□□ -1.72
HIF1A-201ENST00000323441 VSIG10Q8N0Z9 540 aa4.29□□□□□ -1.72
HIF1A-201ENST00000323441 CLEC11AQ9Y240 323 aa4.29□□□□□ -1.72
HIF1A-201ENST00000323441 WASHC2AQ641Q2 1341 aa4.29□□□□□ -1.72
HIF1A-201ENST00000323441 NUP98P52948 1817 aa4.29□□□□□ -1.72
HIF1A-201ENST00000323441 COL3A1P02461 1466 aaPredicted RBP4.29□□□□□ -1.72
HIF1A-201ENST00000323441 AMPHP49418 695 aa4.28□□□□□ -1.72
HIF1A-201ENST00000323441 HIRAP54198 1017 aaPredicted RBP4.28□□□□□ -1.72
HIF1A-201ENST00000323441 ZNF296Q8WUU4 475 aaPredicted RBP4.28□□□□□ -1.72
HIF1A-201ENST00000323441 COG3Q96JB2 828 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms