RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 GNAT3A8MTJ3 354 aa26.47■■□□□ 1.83
SSNA1-201ENST00000322310 SOGA3Q5TF21 947 aa26.47■■□□□ 1.83
SSNA1-201ENST00000322310 LDHDQ86WU2 507 aa26.47■■□□□ 1.83
SSNA1-201ENST00000322310 TAF1DQ9H5J8 278 aaPredicted RBP26.47■■□□□ 1.83
SSNA1-201ENST00000322310 IQCA1LA6NCM1 817 aa26.46■■□□□ 1.83
SSNA1-201ENST00000322310 CC2D1BQ5T0F9 858 aaKnown RBP26.46■■□□□ 1.83
SSNA1-201ENST00000322310 NPM2Q86SE8 214 aaKnown RBP26.46■■□□□ 1.83
SSNA1-201ENST00000322310 FMNL2Q96PY5 1086 aa26.46■■□□□ 1.83
SSNA1-201ENST00000322310 ARFGEF2Q9Y6D5 1785 aa26.46■■□□□ 1.83
SSNA1-201ENST00000322310 KCNQ3O43525 872 aa26.45■■□□□ 1.82
SSNA1-201ENST00000322310 PIP4K2AP48426 406 aaPredicted RBP26.45■■□□□ 1.82
SSNA1-201ENST00000322310 DZIP3Q86Y13 1208 aaKnown RBP26.45■■□□□ 1.82
SSNA1-201ENST00000322310 L3MBTL3Q96JM7 780 aaPredicted RBP26.45■■□□□ 1.82
SSNA1-201ENST00000322310 BCORQ6W2J9 1755 aa26.45■■□□□ 1.82
SSNA1-201ENST00000322310 U2SURPO15042 1029 aaKnown RBP26.44■■□□□ 1.82
SSNA1-201ENST00000322310 C7orf43Q8WVR3 580 aa26.44■■□□□ 1.82
SSNA1-201ENST00000322310 COL3A1P02461 1466 aaPredicted RBP26.43■■□□□ 1.82
SSNA1-201ENST00000322310 KIF7Q2M1P5 1343 aa26.43■■□□□ 1.82
SSNA1-201ENST00000322310 VEGFBP49765 207 aa26.43■■□□□ 1.82
SSNA1-201ENST00000322310 GAS2L2Q8NHY3 880 aa26.43■■□□□ 1.82
SSNA1-201ENST00000322310 ZNF541Q9H0D2 1346 aa26.42■■□□□ 1.82
SSNA1-201ENST00000322310 ITGBL1O95965 494 aaPredicted RBP26.42■■□□□ 1.82
SSNA1-201ENST00000322310 CCDC93Q567U6 631 aa26.42■■□□□ 1.82
SSNA1-201ENST00000322310 EAPPQ56P03 285 aaPredicted RBP26.42■■□□□ 1.82
SSNA1-201ENST00000322310 PRDM10Q9NQV6 1147 aa26.42■■□□□ 1.82
SSNA1-201ENST00000322310 TMEM88BA6NKF7 163 aa26.41■■□□□ 1.82
SSNA1-201ENST00000322310 PER1O15534 1290 aaPredicted RBP26.41■■□□□ 1.82
SSNA1-201ENST00000322310 OLFM4Q6UX06 510 aa26.41■■□□□ 1.82
SSNA1-201ENST00000322310 NBPF5PQ86XG9 351 aaPredicted RBP26.41■■□□□ 1.82
SSNA1-201ENST00000322310 ZNF277Q9NRM2 450 aaPredicted RBP26.41■■□□□ 1.82
SSNA1-201ENST00000322310 SCN4AP35499 1836 aa26.41■■□□□ 1.82
SSNA1-201ENST00000322310 CTCFP49711 727 aaPredicted RBP26.4■■□□□ 1.82
SSNA1-201ENST00000322310 AIDAQ96BJ3 306 aa26.4■■□□□ 1.82
SSNA1-201ENST00000322310 USP16Q9Y5T5 823 aa26.4■■□□□ 1.82
SSNA1-201ENST00000322310 CEMIPQ8WUJ3 1361 aa26.4■■□□□ 1.82
SSNA1-201ENST00000322310 PRAMEF22A3QJZ6 481 aa26.39■■□□□ 1.82
SSNA1-201ENST00000322310 BTBD11A6QL63 1104 aa26.39■■□□□ 1.82
SSNA1-201ENST00000322310 CNGB1Q14028 1251 aaPredicted RBP26.39■■□□□ 1.82
SSNA1-201ENST00000322310 FKBP4Q02790 459 aaKnown RBP eCLIP26.38■■□□□ 1.81
SSNA1-201ENST00000322310 CLEC11AQ9Y240 323 aa26.38■■□□□ 1.81
SSNA1-201ENST00000322310 NPR1P16066 1061 aa26.37■■□□□ 1.81
SSNA1-201ENST00000322310 HACL1Q9UJ83 578 aa26.37■■□□□ 1.81
SSNA1-201ENST00000322310 PHACTR3Q96KR7 559 aa26.36■■□□□ 1.81
SSNA1-201ENST00000322310 EPHX2P34913 555 aa26.35■■□□□ 1.81
SSNA1-201ENST00000322310 LBX1P52954 281 aa26.35■■□□□ 1.81
SSNA1-201ENST00000322310 CLEC4GQ6UXB4 293 aa26.35■■□□□ 1.81
SSNA1-201ENST00000322310 WBP1LQ9NX94 342 aa26.35■■□□□ 1.81
SSNA1-201ENST00000322310 ADAMTSL1Q8N6G6 1762 aa26.35■■□□□ 1.81
SSNA1-201ENST00000322310 RNF123Q5XPI4 1314 aa26.35■■□□□ 1.81
SSNA1-201ENST00000322310 ZNF652Q9Y2D9 606 aa26.34■■□□□ 1.81
SSNA1-201ENST00000322310 KLRG2A4D1S0 409 aaPredicted RBP26.33■■□□□ 1.81
SSNA1-201ENST00000322310 FAM177BA6PVY3 158 aa26.33■■□□□ 1.81
SSNA1-201ENST00000322310 MAP1SQ66K74 1059 aaPredicted RBP26.33■■□□□ 1.81
SSNA1-201ENST00000322310 NIP7Q9Y221 180 aaKnown RBP eCLIP26.32■■□□□ 1.8
SSNA1-201ENST00000322310 PRKAR2BP31323 418 aa26.31■■□□□ 1.8
SSNA1-201ENST00000322310 TPTE2Q6XPS3 522 aa26.31■■□□□ 1.8
SSNA1-201ENST00000322310 RTKN2Q8IZC4 609 aa26.31■■□□□ 1.8
SSNA1-201ENST00000322310 CNTROBQ8N137 903 aa26.31■■□□□ 1.8
SSNA1-201ENST00000322310 RASSF10A6NK89 507 aa26.3■■□□□ 1.8
SSNA1-201ENST00000322310 IARSP41252 1262 aaKnown RBP26.3■■□□□ 1.8
SSNA1-201ENST00000322310 NBPF26B4DH59 902 aa26.29■■□□□ 1.8
SSNA1-201ENST00000322310 FZD9O00144 591 aa26.29■■□□□ 1.8
SSNA1-201ENST00000322310 SNRPA1P09661 255 aaKnown RBP26.29■■□□□ 1.8
SSNA1-201ENST00000322310 DEFB115Q30KQ5 88 aa26.29■■□□□ 1.8
SSNA1-201ENST00000322310 NBPF10Q6P3W6 841 aaKnown RBP26.29■■□□□ 1.8
SSNA1-201ENST00000322310 PNMA8AQ86V59 439 aaPredicted RBP26.29■■□□□ 1.8
SSNA1-201ENST00000322310 SYNE4Q8N205 404 aa26.29■■□□□ 1.8
SSNA1-201ENST00000322310 NBPF15Q8N660 670 aa26.29■■□□□ 1.8
SSNA1-201ENST00000322310 HSPA8P11142 646 aaKnown RBP26.28■■□□□ 1.8
SSNA1-201ENST00000322310 RSPH6AQ9H0K4 717 aa26.28■■□□□ 1.8
SSNA1-201ENST00000322310 MCM10Q7L590 875 aa26.27■■□□□ 1.8
SSNA1-201ENST00000322310 WDR33Q9C0J8 1336 aaKnown RBP26.26■■□□□ 1.79
SSNA1-201ENST00000322310 HLFQ16534 295 aa26.26■■□□□ 1.79
SSNA1-201ENST00000322310 GPC2Q8N158 579 aa26.26■■□□□ 1.79
SSNA1-201ENST00000322310 ABT1Q9ULW3 272 aaKnown RBP26.26■■□□□ 1.79
SSNA1-201ENST00000322310 SNED1Q8TER0 1413 aa26.25■■□□□ 1.79
SSNA1-201ENST00000322310 ALDH1B1P30837 517 aa26.25■■□□□ 1.79
SSNA1-201ENST00000322310 NPC1L1Q9UHC9 1359 aa26.24■■□□□ 1.79
SSNA1-201ENST00000322310 ABHD8Q96I13 439 aa26.24■■□□□ 1.79
SSNA1-201ENST00000322310 COL4A5P29400 1685 aa26.24■■□□□ 1.79
SSNA1-201ENST00000322310 GTF2E1P29083 439 aaPredicted RBP26.23■■□□□ 1.79
SSNA1-201ENST00000322310 FMR1Q06787 632 aaKnown RBP eCLIP26.23■■□□□ 1.79
SSNA1-201ENST00000322310 GJA3Q9Y6H8 435 aa26.23■■□□□ 1.79
SSNA1-201ENST00000322310 ABCC12Q96J65 1359 aa26.22■■□□□ 1.79
SSNA1-201ENST00000322310 MAP2K1Q02750 393 aaPredicted RBP26.22■■□□□ 1.79
SSNA1-201ENST00000322310 DCTN1Q14203 1278 aa26.22■■□□□ 1.79
SSNA1-201ENST00000322310 JDP2Q8WYK2 163 aa26.22■■□□□ 1.79
SSNA1-201ENST00000322310 DDX21Q9NR30 783 aaKnown RBP eCLIP26.22■■□□□ 1.79
SSNA1-201ENST00000322310 LTBP1Q14766 1721 aa26.22■■□□□ 1.79
SSNA1-201ENST00000322310 RGL2O15211 777 aa26.21■■□□□ 1.79
SSNA1-201ENST00000322310 RTF1Q92541 710 aaKnown RBP26.21■■□□□ 1.79
SSNA1-201ENST00000322310 PSMD1Q99460 953 aa26.21■■□□□ 1.79
SSNA1-201ENST00000322310 SLC51AQ86UW1 340 aa26.2■■□□□ 1.78
SSNA1-201ENST00000322310 NUTM1Q86Y26 1132 aa26.2■■□□□ 1.78
SSNA1-201ENST00000322310 CCER1Q8TC90 406 aaPredicted RBP26.2■■□□□ 1.78
SSNA1-201ENST00000322310 EIF6P56537 245 aaKnown RBP26.19■■□□□ 1.78
SSNA1-201ENST00000322310 FAM161AQ3B820 660 aa26.19■■□□□ 1.78
SSNA1-201ENST00000322310 CRY2Q49AN0 593 aa26.19■■□□□ 1.78
SSNA1-201ENST00000322310 LMOD1P29536 600 aaPredicted RBP26.17■■□□□ 1.78
SSNA1-201ENST00000322310 EPS15P42566 896 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms