RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 CCDC24Q8N4L8 307 aa13.1□□□□□ -0.31
TOP3A-201ENST00000321105 SPC24Q8NBT2 197 aa13.1□□□□□ -0.31
TOP3A-201ENST00000321105 CWC22Q9HCG8 908 aaKnown RBP13.09□□□□□ -0.31
TOP3A-201ENST00000321105 DDX21Q9NR30 783 aaKnown RBP eCLIP13.09□□□□□ -0.31
TOP3A-201ENST00000321105 SOS1Q07889 1333 aaPredicted RBP13.09□□□□□ -0.31
TOP3A-201ENST00000321105 BAG4O95429 457 aaKnown RBP13.09□□□□□ -0.31
TOP3A-201ENST00000321105 IL2RBP14784 551 aa13.09□□□□□ -0.31
TOP3A-201ENST00000321105 CCDC144CPQ8IYA2 1237 aa13.09□□□□□ -0.31
TOP3A-201ENST00000321105 RAI14Q9P0K7 980 aa13.09□□□□□ -0.31
TOP3A-201ENST00000321105 TFCP2Q12800 502 aa13.09□□□□□ -0.31
TOP3A-201ENST00000321105 C8orf37Q96NL8 207 aa13.09□□□□□ -0.31
TOP3A-201ENST00000321105 CHMLP26374 656 aa13.08□□□□□ -0.31
TOP3A-201ENST00000321105 MADDQ8WXG6 1647 aa13.08□□□□□ -0.31
TOP3A-201ENST00000321105 SUCLG2Q96I99 432 aa13.08□□□□□ -0.31
TOP3A-201ENST00000321105 USP26Q9BXU7 913 aa13.08□□□□□ -0.31
TOP3A-201ENST00000321105 WDR33Q9C0J8 1336 aaKnown RBP13.08□□□□□ -0.31
TOP3A-201ENST00000321105 SLAIN2Q9P270 581 aa13.08□□□□□ -0.31
TOP3A-201ENST00000321105 ERICH2A1L162 156 aa13.08□□□□□ -0.32
TOP3A-201ENST00000321105 VPS53Q5VIR6 699 aa13.08□□□□□ -0.32
TOP3A-201ENST00000321105 ABCC4O15439 1325 aa13.08□□□□□ -0.32
TOP3A-201ENST00000321105 MINDY4BA8MYZ0 360 aa13.08□□□□□ -0.32
TOP3A-201ENST00000321105 USP6P35125 1406 aa13.08□□□□□ -0.32
TOP3A-201ENST00000321105 GIGYF1O75420 1035 aaPredicted RBP13.08□□□□□ -0.32
TOP3A-201ENST00000321105 CCDC129Q6ZRS4 1044 aa13.08□□□□□ -0.32
TOP3A-201ENST00000321105 DCAF5Q96JK2 942 aa13.08□□□□□ -0.32
TOP3A-201ENST00000321105 GOLGA6L6A8MZA4 724 aa13.07□□□□□ -0.32
TOP3A-201ENST00000321105 UNC5CLQ8IV45 518 aa13.07□□□□□ -0.32
TOP3A-201ENST00000321105 ZNF592Q92610 1267 aa13.07□□□□□ -0.32
TOP3A-201ENST00000321105 CD2BP2O95400 341 aaKnown RBP13.07□□□□□ -0.32
TOP3A-201ENST00000321105 ME1P48163 572 aa13.07□□□□□ -0.32
TOP3A-201ENST00000321105 EVI5LQ96CN4 794 aa13.07□□□□□ -0.32
TOP3A-201ENST00000321105 FAM227BQ96M60 508 aa13.07□□□□□ -0.32
TOP3A-201ENST00000321105 CIZ1Q9ULV3 898 aaPredicted RBP13.07□□□□□ -0.32
TOP3A-201ENST00000321105 JAG2Q9Y219 1238 aa13.07□□□□□ -0.32
TOP3A-201ENST00000321105 RBM8AQ9Y5S9 174 aaKnown RBP13.07□□□□□ -0.32
TOP3A-201ENST00000321105 CEP152O94986 1710 aa13.07□□□□□ -0.32
TOP3A-201ENST00000321105 TMEM94Q12767 1356 aa13.07□□□□□ -0.32
TOP3A-201ENST00000321105 TDO2P48775 406 aa13.07□□□□□ -0.32
TOP3A-201ENST00000321105 NMIQ13287 307 aaPredicted RBP13.07□□□□□ -0.32
TOP3A-201ENST00000321105 CCDC73Q6ZRK6 1079 aa13.07□□□□□ -0.32
TOP3A-201ENST00000321105 ZNF853P0CG23 659 aa13.06□□□□□ -0.32
TOP3A-201ENST00000321105 SIRT1Q96EB6 747 aa13.06□□□□□ -0.32
TOP3A-201ENST00000321105 WWC3Q9ULE0 1092 aa13.06□□□□□ -0.32
TOP3A-201ENST00000321105 LIMCH1Q9UPQ0 1083 aa13.06□□□□□ -0.32
TOP3A-201ENST00000321105 RTL1A6NKG5 1358 aa13.06□□□□□ -0.32
TOP3A-201ENST00000321105 SASS6Q6UVJ0 657 aa13.06□□□□□ -0.32
TOP3A-201ENST00000321105 DNAJC10Q8IXB1 793 aa13.06□□□□□ -0.32
TOP3A-201ENST00000321105 SPHKAPQ2M3C7 1700 aa13.06□□□□□ -0.32
TOP3A-201ENST00000321105 KCNQ4P56696 695 aa13.06□□□□□ -0.32
TOP3A-201ENST00000321105 ARHGEF25Q86VW2 580 aa13.06□□□□□ -0.32
TOP3A-201ENST00000321105 BRF1Q92994 677 aa13.06□□□□□ -0.32
TOP3A-201ENST00000321105 AIDAQ96BJ3 306 aa13.06□□□□□ -0.32
TOP3A-201ENST00000321105 DBNDD2Q9BQY9 259 aa13.06□□□□□ -0.32
TOP3A-201ENST00000321105 PLEKHG1Q9ULL1 1385 aa13.06□□□□□ -0.32
TOP3A-201ENST00000321105 NRDCO43847 1150 aa13.05□□□□□ -0.32
TOP3A-201ENST00000321105 TTLL7Q6ZT98 887 aa13.05□□□□□ -0.32
TOP3A-201ENST00000321105 SLC52A2Q9HAB3 445 aa13.05□□□□□ -0.32
TOP3A-201ENST00000321105 ABCA6Q8N139 1617 aa13.05□□□□□ -0.32
TOP3A-201ENST00000321105 ATP6V1AP38606 617 aa13.05□□□□□ -0.32
TOP3A-201ENST00000321105 PPP1R1BQ9UD71 204 aaPredicted RBP13.05□□□□□ -0.32
TOP3A-201ENST00000321105 PDCP20941 246 aa13.05□□□□□ -0.32
TOP3A-201ENST00000321105 GJB2P29033 226 aa13.05□□□□□ -0.32
TOP3A-201ENST00000321105 PKP1Q13835 747 aa13.05□□□□□ -0.32
TOP3A-201ENST00000321105 ZNF219Q9P2Y4 722 aaPredicted RBP13.05□□□□□ -0.32
TOP3A-201ENST00000321105 IGSF1Q8N6C5 1336 aa13.05□□□□□ -0.32
TOP3A-201ENST00000321105 UBAP1LF5GYI3 381 aa13.04□□□□□ -0.32
TOP3A-201ENST00000321105 MARCH6O60337 910 aa13.04□□□□□ -0.32
TOP3A-201ENST00000321105 ALDH1L1O75891 902 aa13.04□□□□□ -0.32
TOP3A-201ENST00000321105 MBD3O95983 291 aa13.04□□□□□ -0.32
TOP3A-201ENST00000321105 FAM173BQ6P4H8 233 aa13.04□□□□□ -0.32
TOP3A-201ENST00000321105 CKAP2LQ8IYA6 745 aa13.04□□□□□ -0.32
TOP3A-201ENST00000321105 PHF23Q9BUL5 403 aaPredicted RBP13.04□□□□□ -0.32
TOP3A-201ENST00000321105 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.04□□□□□ -0.321e-6■■■■□ 21.2
TOP3A-201ENST00000321105 PPRC1Q5VV67 1664 aaKnown RBP13.04□□□□□ -0.32
TOP3A-201ENST00000321105 HCLS1P14317 486 aaPredicted RBP13.04□□□□□ -0.32
TOP3A-201ENST00000321105 IGHMBP2P38935 993 aaKnown RBP13.04□□□□□ -0.32
TOP3A-201ENST00000321105 PALD1Q9ULE6 856 aa13.04□□□□□ -0.32
TOP3A-201ENST00000321105 PRIM1P49642 420 aaKnown RBP13.04□□□□□ -0.32
TOP3A-201ENST00000321105 KRT85P78386 507 aa13.04□□□□□ -0.32
TOP3A-201ENST00000321105 FAM182BQ5T319 152 aa13.04□□□□□ -0.32
TOP3A-201ENST00000321105 SPATA32Q96LK8 384 aa13.03□□□□□ -0.32
TOP3A-201ENST00000321105 NOL10Q9BSC4 688 aaKnown RBP13.03□□□□□ -0.32
TOP3A-201ENST00000321105 ANO8Q9HCE9 1232 aaPredicted RBP13.03□□□□□ -0.32
TOP3A-201ENST00000321105 ARHGAP31Q2M1Z3 1444 aa13.03□□□□□ -0.32
TOP3A-201ENST00000321105 ABCA9Q8IUA7 1624 aa13.03□□□□□ -0.32
TOP3A-201ENST00000321105 ATP2B2Q01814 1243 aa13.03□□□□□ -0.32
TOP3A-201ENST00000321105 STK38Q15208 465 aa13.03□□□□□ -0.32
TOP3A-201ENST00000321105 DDB1Q16531 1140 aa13.03□□□□□ -0.32
TOP3A-201ENST00000321105 FAM135BQ49AJ0 1406 aa13.03□□□□□ -0.32
TOP3A-201ENST00000321105 ANKRD18BA2A2Z9 1011 aa13.03□□□□□ -0.32
TOP3A-201ENST00000321105 FAM43AQ8N2R8 423 aa13.03□□□□□ -0.32
TOP3A-201ENST00000321105 GLI2P10070 1586 aa13.03□□□□□ -0.32
TOP3A-201ENST00000321105 AK2P54819 239 aa13.03□□□□□ -0.32
TOP3A-201ENST00000321105 TSPY26PQ9H489 355 aa13.03□□□□□ -0.32
TOP3A-201ENST00000321105 NLRP1Q9C000 1473 aa13.03□□□□□ -0.32
TOP3A-201ENST00000321105 KIAA0232Q92628 1395 aa13.02□□□□□ -0.32
TOP3A-201ENST00000321105 TRIM5Q9C035 493 aa13.02□□□□□ -0.32
TOP3A-201ENST00000321105 CLSTN1O94985 981 aa13.02□□□□□ -0.33
TOP3A-201ENST00000321105 TULP4Q9NRJ4 1543 aa13.02□□□□□ -0.33
TOP3A-201ENST00000321105 AATKQ6ZMQ8 1374 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms