RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 NGLY1Q96IV0 654 aa4.36□□□□□ -1.71
SCAMP1-201ENST00000320280 PCDH11XQ9BZA7 1347 aa4.36□□□□□ -1.71
SCAMP1-201ENST00000320280 PCDH11YQ9BZA8 1340 aa4.36□□□□□ -1.71
SCAMP1-201ENST00000320280 A0A0G2JS52 829 aa4.35□□□□□ -1.71
SCAMP1-201ENST00000320280 MTHFSP49914 203 aa4.35□□□□□ -1.71
SCAMP1-201ENST00000320280 PIP4K2BP78356 416 aa4.35□□□□□ -1.71
SCAMP1-201ENST00000320280 IBTKQ9P2D0 1353 aaPredicted RBP4.35□□□□□ -1.71
SCAMP1-201ENST00000320280 COL5A3P25940 1745 aaPredicted RBP4.35□□□□□ -1.71
SCAMP1-201ENST00000320280 PDE3BQ13370 1112 aa4.35□□□□□ -1.71
SCAMP1-201ENST00000320280 WDR43Q15061 677 aaKnown RBP eCLIP4.35□□□□□ -1.71
SCAMP1-201ENST00000320280 ANKRD24Q8TF21 1146 aa4.35□□□□□ -1.71
SCAMP1-201ENST00000320280 SPG7Q9UQ90 795 aa4.35□□□□□ -1.71
SCAMP1-201ENST00000320280 PPEF1O14829 653 aaPredicted RBP4.35□□□□□ -1.71
SCAMP1-201ENST00000320280 EIF4A2Q14240 407 aaKnown RBP4.35□□□□□ -1.71
SCAMP1-201ENST00000320280 PPP1R18Q6NYC8 613 aa4.35□□□□□ -1.71
SCAMP1-201ENST00000320280 TCP11L2Q8N4U5 519 aa4.35□□□□□ -1.71
SCAMP1-201ENST00000320280 PNISRQ8TF01 805 aaKnown RBP4.35□□□□□ -1.71
SCAMP1-201ENST00000320280 RUNDC1Q96C34 613 aa4.35□□□□□ -1.71
SCAMP1-201ENST00000320280 POLR3GLQ9BT43 218 aa4.35□□□□□ -1.71
SCAMP1-201ENST00000320280 COL24A1Q17RW2 1714 aa4.35□□□□□ -1.71
SCAMP1-201ENST00000320280 CT47B1P0C2W7 299 aaPredicted RBP4.34□□□□□ -1.71
SCAMP1-201ENST00000320280 RBM6P78332 1123 aaKnown RBP4.34□□□□□ -1.71
SCAMP1-201ENST00000320280 PLEKHO1Q53GL0 409 aaPredicted RBP4.34□□□□□ -1.71
SCAMP1-201ENST00000320280 GFRA3O60609 400 aa4.34□□□□□ -1.71
SCAMP1-201ENST00000320280 TATP17735 454 aaPredicted RBP4.34□□□□□ -1.71
SCAMP1-201ENST00000320280 SLC4A3P48751 1232 aa4.34□□□□□ -1.71
SCAMP1-201ENST00000320280 CC2D1BQ5T0F9 858 aaKnown RBP4.34□□□□□ -1.71
SCAMP1-201ENST00000320280 MEX3CQ5U5Q3 659 aaKnown RBP4.34□□□□□ -1.71
SCAMP1-201ENST00000320280 RSPH6AQ9H0K4 717 aa4.34□□□□□ -1.71
SCAMP1-201ENST00000320280 PCDHB3Q9Y5E6 796 aa4.34□□□□□ -1.71
SCAMP1-201ENST00000320280 CEMIPQ8WUJ3 1361 aa4.34□□□□□ -1.72
SCAMP1-201ENST00000320280 MAP3K5Q99683 1374 aa4.34□□□□□ -1.72
SCAMP1-201ENST00000320280 BTAF1O14981 1849 aa4.34□□□□□ -1.72
SCAMP1-201ENST00000320280 FAM83GA6ND36 823 aa4.34□□□□□ -1.72
SCAMP1-201ENST00000320280 IL2RBP14784 551 aa4.34□□□□□ -1.72
SCAMP1-201ENST00000320280 ZNF428Q96B54 188 aa4.34□□□□□ -1.72
SCAMP1-201ENST00000320280 TAF1LQ8IZX4 1826 aa4.33□□□□□ -1.72
SCAMP1-201ENST00000320280 MEGF6O75095 1541 aa4.33□□□□□ -1.72
SCAMP1-201ENST00000320280 AKAP4Q5JQC9 854 aa4.33□□□□□ -1.72
SCAMP1-201ENST00000320280 LMOD2Q6P5Q4 547 aa4.33□□□□□ -1.72
SCAMP1-201ENST00000320280 LAPTM4BQ86VI4 370 aa4.33□□□□□ -1.72
SCAMP1-201ENST00000320280 AFF2P51816 1311 aa4.33□□□□□ -1.72
SCAMP1-201ENST00000320280 TNFRSF10AO00220 468 aa4.33□□□□□ -1.72
SCAMP1-201ENST00000320280 BLOC1S3Q6QNY0 202 aa4.33□□□□□ -1.72
SCAMP1-201ENST00000320280 CCDC125Q86Z20 511 aa4.33□□□□□ -1.72
SCAMP1-201ENST00000320280 WDR63Q8IWG1 891 aa4.33□□□□□ -1.72
SCAMP1-201ENST00000320280 RDH13Q8NBN7 331 aa4.33□□□□□ -1.72
SCAMP1-201ENST00000320280 RAPGEF4Q8WZA2 1011 aa4.33□□□□□ -1.72
SCAMP1-201ENST00000320280 PLEKHF1Q96S99 279 aa4.33□□□□□ -1.72
SCAMP1-201ENST00000320280 USP21Q9UK80 565 aa4.33□□□□□ -1.72
SCAMP1-201ENST00000320280 EMILIN1Q9Y6C2 1016 aa4.33□□□□□ -1.72
SCAMP1-201ENST00000320280 MAPK8IP3Q9UPT6 1336 aa4.33□□□□□ -1.72
SCAMP1-201ENST00000320280 ERVV-2B6SEH9 535 aa4.33□□□□□ -1.72
SCAMP1-201ENST00000320280 FECHP22830 423 aa4.33□□□□□ -1.72
SCAMP1-201ENST00000320280 EVA1CP58658 441 aa4.33□□□□□ -1.72
SCAMP1-201ENST00000320280 GJD4Q96KN9 370 aaPredicted RBP4.33□□□□□ -1.72
SCAMP1-201ENST00000320280 TJP1Q07157 1748 aa4.32□□□□□ -1.72
SCAMP1-201ENST00000320280 HOXB7P09629 217 aa4.32□□□□□ -1.72
SCAMP1-201ENST00000320280 NFE2L2Q16236 605 aa4.32□□□□□ -1.72
SCAMP1-201ENST00000320280 MRS2Q9HD23 443 aa4.32□□□□□ -1.72
SCAMP1-201ENST00000320280 NPDC1Q9NQX5 325 aaPredicted RBP4.32□□□□□ -1.72
SCAMP1-201ENST00000320280 BTG4Q9NY30 223 aa4.32□□□□□ -1.72
SCAMP1-201ENST00000320280 ZBED9Q6R2W3 1325 aa4.32□□□□□ -1.72
SCAMP1-201ENST00000320280 EYA1Q99502 592 aa4.32□□□□□ -1.72
SCAMP1-201ENST00000320280 BCORQ6W2J9 1755 aa4.32□□□□□ -1.72
SCAMP1-201ENST00000320280 DDX11L8A8MPP1 907 aa4.32□□□□□ -1.72
SCAMP1-201ENST00000320280 IFNL2Q8IZJ0 200 aa4.32□□□□□ -1.72
SCAMP1-201ENST00000320280 ERBB4Q15303 1308 aa4.32□□□□□ -1.72
SCAMP1-201ENST00000320280 XPCQ01831 940 aaPredicted RBP4.31□□□□□ -1.72
SCAMP1-201ENST00000320280 RRS1Q15050 365 aaKnown RBP4.31□□□□□ -1.72
SCAMP1-201ENST00000320280 TOM1L2Q6ZVM7 507 aa4.31□□□□□ -1.72
SCAMP1-201ENST00000320280 DDX17Q92841 729 aaKnown RBP4.31□□□□□ -1.72
SCAMP1-201ENST00000320280 DCAF5Q96JK2 942 aa4.31□□□□□ -1.72
SCAMP1-201ENST00000320280 ANKRD36CQ5JPF3 1778 aa4.31□□□□□ -1.72
SCAMP1-201ENST00000320280 RCCD1A6NED2 376 aa4.31□□□□□ -1.72
SCAMP1-201ENST00000320280 HSP90AB2PQ58FF8 381 aa4.31□□□□□ -1.72
SCAMP1-201ENST00000320280 NUP188Q5SRE5 1749 aa4.31□□□□□ -1.72
SCAMP1-201ENST00000320280 CFHP08603 1231 aa4.31□□□□□ -1.72
SCAMP1-201ENST00000320280 CSB-PGBD3P0DP91 1061 aa4.31□□□□□ -1.72
SCAMP1-201ENST00000320280 ZCRB1Q8TBF4 217 aaKnown RBP4.31□□□□□ -1.72
SCAMP1-201ENST00000320280 SMARCC1Q92922 1105 aaPredicted RBP4.31□□□□□ -1.72
SCAMP1-201ENST00000320280 ZNF521Q96K83 1311 aa4.31□□□□□ -1.72
SCAMP1-201ENST00000320280 SCN7AQ01118 1682 aa4.3□□□□□ -1.72
SCAMP1-201ENST00000320280 KCPQ6ZWJ8 1503 aa4.3□□□□□ -1.72
SCAMP1-201ENST00000320280 GNAT3A8MTJ3 354 aa4.3□□□□□ -1.72
SCAMP1-201ENST00000320280 ZC3H6P61129 1189 aaKnown RBP4.3□□□□□ -1.72
SCAMP1-201ENST00000320280 PLCB2Q00722 1185 aa4.3□□□□□ -1.72
SCAMP1-201ENST00000320280 FOXC1Q12948 553 aa4.3□□□□□ -1.72
SCAMP1-201ENST00000320280 TJAP1Q5JTD0 557 aa4.3□□□□□ -1.72
SCAMP1-201ENST00000320280 C1orf141Q5JVX7 400 aa4.3□□□□□ -1.72
SCAMP1-201ENST00000320280 VSIG10Q8N0Z9 540 aa4.3□□□□□ -1.72
SCAMP1-201ENST00000320280 IFT57Q9NWB7 429 aa4.3□□□□□ -1.72
SCAMP1-201ENST00000320280 PXDNLA1KZ92 1463 aa4.3□□□□□ -1.72
SCAMP1-201ENST00000320280 RXRBP28702 533 aa4.3□□□□□ -1.72
SCAMP1-201ENST00000320280 NBPF6Q5VWK0 638 aa4.3□□□□□ -1.72
SCAMP1-201ENST00000320280 SLF2Q8IX21 1173 aa4.3□□□□□ -1.72
SCAMP1-201ENST00000320280 RBM46Q8TBY0 533 aaKnown RBP4.3□□□□□ -1.72
SCAMP1-201ENST00000320280 NBPF4Q96M43 638 aa4.3□□□□□ -1.72
SCAMP1-201ENST00000320280 IL21Q9HBE4 155 aa4.3□□□□□ -1.72
SCAMP1-201ENST00000320280 LAMB2P55268 1798 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms