RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 EFCC1Q9HA90 598 aa17.76■□□□□ 0.43
SCAP-202ENST00000320017 CLIP2Q9UDT6 1046 aa17.76■□□□□ 0.43
SCAP-202ENST00000320017 PALD1Q9ULE6 856 aa17.75■□□□□ 0.43
SCAP-202ENST00000320017 ERCC6LQ2NKX8 1250 aa17.75■□□□□ 0.43
SCAP-202ENST00000320017 FILIP1Q7Z7B0 1213 aa17.75■□□□□ 0.43
SCAP-202ENST00000320017 VPS37CA5D8V6 355 aaPredicted RBP17.74■□□□□ 0.43
SCAP-202ENST00000320017 USP27XA6NNY8 438 aa17.74■□□□□ 0.43
SCAP-202ENST00000320017 PSME1Q06323 249 aa17.74■□□□□ 0.43
SCAP-202ENST00000320017 FAM200AQ8TCP9 573 aa17.74■□□□□ 0.43
SCAP-202ENST00000320017 DHX16O60231 1041 aaKnown RBP17.74■□□□□ 0.43
SCAP-202ENST00000320017 USHBP1Q8N6Y0 703 aa17.74■□□□□ 0.43
SCAP-202ENST00000320017 IL1RAPL2Q9NP60 686 aa17.74■□□□□ 0.43
SCAP-202ENST00000320017 ARHGEF28Q8N1W1 1705 aaKnown RBP17.74■□□□□ 0.43
SCAP-202ENST00000320017 GOLGA6L4A6NEF3 574 aa17.73■□□□□ 0.43
SCAP-202ENST00000320017 CACTINQ8WUQ7 758 aaKnown RBP17.73■□□□□ 0.43
SCAP-202ENST00000320017 ERO1AQ96HE7 468 aa17.73■□□□□ 0.43
SCAP-202ENST00000320017 SLU7O95391 586 aaKnown RBP17.73■□□□□ 0.43
SCAP-202ENST00000320017 HSPA2P54652 639 aa17.73■□□□□ 0.43
SCAP-202ENST00000320017 MYO1CO00159 1063 aa17.73■□□□□ 0.43
SCAP-202ENST00000320017 GPS2Q13227 327 aa17.73■□□□□ 0.43
SCAP-202ENST00000320017 DRC1Q96MC2 740 aa17.73■□□□□ 0.43
SCAP-202ENST00000320017 SPATA31D1Q6ZQQ2 1576 aa17.73■□□□□ 0.43
SCAP-202ENST00000320017 DDX54Q8TDD1 881 aaKnown RBP17.72■□□□□ 0.43
SCAP-202ENST00000320017 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.72■□□□□ 0.43
SCAP-202ENST00000320017 TBX22Q9Y458 520 aa17.72■□□□□ 0.43
SCAP-202ENST00000320017 DNM1Q05193 864 aaKnown RBP17.72■□□□□ 0.43
SCAP-202ENST00000320017 BRD2P25440 801 aaKnown RBP17.72■□□□□ 0.43
SCAP-202ENST00000320017 ARID5BQ14865 1188 aa17.72■□□□□ 0.43
SCAP-202ENST00000320017 GOLGA6L1Q8N7Z2 621 aa17.72■□□□□ 0.43
SCAP-202ENST00000320017 TSPYL4Q9UJ04 414 aa17.72■□□□□ 0.43
SCAP-202ENST00000320017 TPM4P67936 248 aa17.71■□□□□ 0.43
SCAP-202ENST00000320017 ANO6Q4KMQ2 910 aa17.71■□□□□ 0.43
SCAP-202ENST00000320017 TXLNBQ8N3L3 684 aa17.71■□□□□ 0.43
SCAP-202ENST00000320017 MAP3K11Q16584 847 aa17.71■□□□□ 0.43
SCAP-202ENST00000320017 CEP85Q6P2H3 762 aa17.71■□□□□ 0.43
SCAP-202ENST00000320017 DCTPP1Q9H773 170 aa17.71■□□□□ 0.43
SCAP-202ENST00000320017 ZNF446Q9NWS9 450 aa17.71■□□□□ 0.43
SCAP-202ENST00000320017 LCMT1Q9UIC8 334 aa17.71■□□□□ 0.43
SCAP-202ENST00000320017 SMC3Q9UQE7 1217 aa17.71■□□□□ 0.43
SCAP-202ENST00000320017 EIF4A2Q14240 407 aaKnown RBP17.7■□□□□ 0.42
SCAP-202ENST00000320017 ZSCAN26Q16670 478 aa17.7■□□□□ 0.42
SCAP-202ENST00000320017 NUP62CLQ9H1M0 184 aa17.7■□□□□ 0.42
SCAP-202ENST00000320017 ZSCAN22P10073 491 aaPredicted RBP17.7■□□□□ 0.42
SCAP-202ENST00000320017 TYRO3Q06418 890 aa17.7■□□□□ 0.42
SCAP-202ENST00000320017 ARHGAP29Q52LW3 1261 aa17.7■□□□□ 0.42
SCAP-202ENST00000320017 CASQ1P31415 396 aa17.7■□□□□ 0.42
SCAP-202ENST00000320017 ST5P78524 1137 aa17.7■□□□□ 0.42
SCAP-202ENST00000320017 TMCO3Q6UWJ1 677 aa17.7■□□□□ 0.42
SCAP-202ENST00000320017 EP400NLQ6ZTU2 488 aa17.7■□□□□ 0.42
SCAP-202ENST00000320017 PROSER2Q86WR7 435 aaPredicted RBP17.7■□□□□ 0.42
SCAP-202ENST00000320017 ADAMTS13Q76LX8 1427 aa17.7■□□□□ 0.42
SCAP-202ENST00000320017 CD163L1Q9NR16 1453 aa17.7■□□□□ 0.42
SCAP-202ENST00000320017 CHRM1P11229 460 aaPredicted RBP17.69■□□□□ 0.42
SCAP-202ENST00000320017 CUL4AQ13619 759 aa17.69■□□□□ 0.42
SCAP-202ENST00000320017 ZCCHC17Q9NP64 241 aaKnown RBP17.69■□□□□ 0.42
SCAP-202ENST00000320017 CWC15Q9P013 229 aaKnown RBP17.69■□□□□ 0.42
SCAP-202ENST00000320017 ATP6V1DQ9Y5K8 247 aa17.69■□□□□ 0.42
SCAP-202ENST00000320017 SKILP12757 684 aa17.69■□□□□ 0.42
SCAP-202ENST00000320017 LMAN1P49257 510 aa17.69■□□□□ 0.42
SCAP-202ENST00000320017 STX6O43752 255 aa17.69■□□□□ 0.42
SCAP-202ENST00000320017 ICE2Q659A1 982 aa17.69■□□□□ 0.42
SCAP-202ENST00000320017 CREBRFQ8IUR6 639 aa17.69■□□□□ 0.42
SCAP-202ENST00000320017 INTS4Q96HW7 963 aaKnown RBP17.69■□□□□ 0.42
SCAP-202ENST00000320017 TNMDQ9H2S6 317 aa17.69■□□□□ 0.42
SCAP-202ENST00000320017 PLEKHG1Q9ULL1 1385 aa17.68■□□□□ 0.42
SCAP-202ENST00000320017 PRR29P0C7W0 189 aa17.68■□□□□ 0.42
SCAP-202ENST00000320017 CLCN6P51797 869 aa17.68■□□□□ 0.42
SCAP-202ENST00000320017 ZNF75DP51815 510 aa17.68■□□□□ 0.42
SCAP-202ENST00000320017 FERMT3Q86UX7 667 aa17.68■□□□□ 0.42
SCAP-202ENST00000320017 CBX8Q9HC52 389 aa17.68■□□□□ 0.42
SCAP-202ENST00000320017 ABCC4O15439 1325 aa17.68■□□□□ 0.42
SCAP-202ENST00000320017 MSH6P52701 1360 aa17.68■□□□□ 0.42
SCAP-202ENST00000320017 PNMA6AP0CW24 399 aaPredicted RBP17.68■□□□□ 0.42
SCAP-202ENST00000320017 EIF2S2P20042 333 aaKnown RBP17.68■□□□□ 0.42
SCAP-202ENST00000320017 LMOD3Q0VAK6 560 aa17.68■□□□□ 0.42
SCAP-202ENST00000320017 SMARCE1Q969G3 411 aa17.68■□□□□ 0.42
SCAP-202ENST00000320017 KIF1BPQ96EK5 621 aa17.68■□□□□ 0.42
SCAP-202ENST00000320017 CCDC34Q96HJ3 373 aa17.68■□□□□ 0.42
SCAP-202ENST00000320017 GOLGA6L19H0YKK7 550 aa17.68■□□□□ 0.42
SCAP-202ENST00000320017 CCDC144BQ3MJ40 725 aa17.68■□□□□ 0.42
SCAP-202ENST00000320017 NUTM1Q86Y26 1132 aa17.68■□□□□ 0.42
SCAP-202ENST00000320017 CCDC144CPQ8IYA2 1237 aa17.68■□□□□ 0.42
SCAP-202ENST00000320017 FBXW7Q969H0 707 aa17.68■□□□□ 0.42
SCAP-202ENST00000320017 ARGLU1Q9NWB6 273 aaPredicted RBP17.67■□□□□ 0.42
SCAP-202ENST00000320017 PTPRUQ92729 1446 aa17.67■□□□□ 0.42
SCAP-202ENST00000320017 SART3Q15020 963 aaKnown RBP17.67■□□□□ 0.42
SCAP-202ENST00000320017 ANKRD44Q8N8A2 993 aa17.67■□□□□ 0.42
SCAP-202ENST00000320017 GEMIN8Q9NWZ8 242 aaKnown RBP17.67■□□□□ 0.42
SCAP-202ENST00000320017 SYT1P21579 422 aa17.66■□□□□ 0.42
SCAP-202ENST00000320017 ORAI2Q96SN7 254 aa17.66■□□□□ 0.42
SCAP-202ENST00000320017 MYCBPQ99417 103 aaPredicted RBP17.66■□□□□ 0.42
SCAP-202ENST00000320017 FUCA2Q9BTY2 467 aa17.66■□□□□ 0.42
SCAP-202ENST00000320017 ARHGAP45Q92619 1136 aa17.66■□□□□ 0.42
SCAP-202ENST00000320017 MAP3K19Q56UN5 1328 aa17.66■□□□□ 0.42
SCAP-202ENST00000320017 CCDC171Q6TFL3 1326 aa17.66■□□□□ 0.42
SCAP-202ENST00000320017 EDC4Q6P2E9 1401 aaKnown RBP17.66■□□□□ 0.42
SCAP-202ENST00000320017 LRRC7Q96NW7 1537 aa17.66■□□□□ 0.42
SCAP-202ENST00000320017 F13A1P00488 732 aa17.66■□□□□ 0.42
SCAP-202ENST00000320017 DDX17Q92841 729 aaKnown RBP17.66■□□□□ 0.42
SCAP-202ENST00000320017 DNAJC25Q9H1X3 360 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms