RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 ZNF330Q9Y3S2 320 aaPredicted RBP19.03■□□□□ 0.64
RPP40-201ENST00000319533 POTECB2RU33 542 aa19.02■□□□□ 0.64
RPP40-201ENST00000319533 RGL2O15211 777 aa19.02■□□□□ 0.64
RPP40-201ENST00000319533 HTATSF1O43719 755 aaKnown RBP19.02■□□□□ 0.64
RPP40-201ENST00000319533 C21orf2O43822 256 aa19.02■□□□□ 0.64
RPP40-201ENST00000319533 STYK1Q6J9G0 422 aa19.02■□□□□ 0.64
RPP40-201ENST00000319533 NPM2Q86SE8 214 aaKnown RBP19.02■□□□□ 0.64
RPP40-201ENST00000319533 CCDC24Q8N4L8 307 aa19.02■□□□□ 0.64
RPP40-201ENST00000319533 CNBD1Q8NA66 436 aa19.02■□□□□ 0.64
RPP40-201ENST00000319533 DICER1Q9UPY3 1922 aaKnown RBP19.02■□□□□ 0.63
RPP40-201ENST00000319533 SNRPA1P09661 255 aaKnown RBP19.01■□□□□ 0.63
RPP40-201ENST00000319533 SRGNP10124 158 aa19.01■□□□□ 0.63
RPP40-201ENST00000319533 CNKSR1Q969H4 720 aa19.01■□□□□ 0.63
RPP40-201ENST00000319533 PRAMEF22A3QJZ6 481 aa19■□□□□ 0.63
RPP40-201ENST00000319533 U2AF1L5P0DN76 240 aaPredicted RBP19■□□□□ 0.63
RPP40-201ENST00000319533 ST5P78524 1137 aa19■□□□□ 0.63
RPP40-201ENST00000319533 U2AF1Q01081 240 aaKnown RBP eCLIP19■□□□□ 0.63
RPP40-201ENST00000319533 RTF1Q92541 710 aaKnown RBP19■□□□□ 0.63
RPP40-201ENST00000319533 ARFGEF2Q9Y6D5 1785 aa18.99■□□□□ 0.63
RPP40-201ENST00000319533 DPY19L2Q6NUT2 758 aa18.99■□□□□ 0.63
RPP40-201ENST00000319533 MCM10Q7L590 875 aa18.99■□□□□ 0.63
RPP40-201ENST00000319533 MASTLQ96GX5 879 aa18.99■□□□□ 0.63
RPP40-201ENST00000319533 SLX4Q8IY92 1834 aa18.98■□□□□ 0.63
RPP40-201ENST00000319533 KLRG2A4D1S0 409 aaPredicted RBP18.98■□□□□ 0.63
RPP40-201ENST00000319533 ERFEQ4G0M1 354 aa18.98■□□□□ 0.63
RPP40-201ENST00000319533 NBPF26B4DH59 902 aa18.97■□□□□ 0.63
RPP40-201ENST00000319533 PIP4K2AP48426 406 aaPredicted RBP18.97■□□□□ 0.63
RPP40-201ENST00000319533 SOGA3Q5TF21 947 aa18.97■□□□□ 0.63
RPP40-201ENST00000319533 PRPF40BQ6NWY9 871 aaKnown RBP18.97■□□□□ 0.63
RPP40-201ENST00000319533 NBPF10Q6P3W6 841 aaKnown RBP18.97■□□□□ 0.63
RPP40-201ENST00000319533 NBPF15Q8N660 670 aa18.97■□□□□ 0.63
RPP40-201ENST00000319533 C7orf43Q8WVR3 580 aa18.97■□□□□ 0.63
RPP40-201ENST00000319533 TAOK3Q9H2K8 898 aa18.97■□□□□ 0.63
RPP40-201ENST00000319533 ZNF652Q9Y2D9 606 aa18.97■□□□□ 0.63
RPP40-201ENST00000319533 ZNF219Q9P2Y4 722 aaPredicted RBP18.96■□□□□ 0.63
RPP40-201ENST00000319533 PCNTO95613 3336 aa18.96■□□□□ 0.63
RPP40-201ENST00000319533 DCTN1Q14203 1278 aa18.95■□□□□ 0.62
RPP40-201ENST00000319533 TAF7Q15545 349 aaPredicted RBP18.95■□□□□ 0.62
RPP40-201ENST00000319533 NBPF5PQ86XG9 351 aaPredicted RBP18.95■□□□□ 0.62
RPP40-201ENST00000319533 NPHP1O15259 732 aa18.94■□□□□ 0.62
RPP40-201ENST00000319533 NPR1P16066 1061 aa18.93■□□□□ 0.62
RPP40-201ENST00000319533 TPTE2Q6XPS3 522 aa18.93■□□□□ 0.62
RPP40-201ENST00000319533 CACNA1SQ13698 1873 aa18.92■□□□□ 0.62
RPP40-201ENST00000319533 CCDC93Q567U6 631 aa18.91■□□□□ 0.62
RPP40-201ENST00000319533 NIP7Q9Y221 180 aaKnown RBP eCLIP18.91■□□□□ 0.62
RPP40-201ENST00000319533 DDNO94850 711 aaPredicted RBP18.9■□□□□ 0.62
RPP40-201ENST00000319533 PNISRQ8TF01 805 aaKnown RBP18.9■□□□□ 0.62
RPP40-201ENST00000319533 LAMB4A4D0S4 1761 aa18.9■□□□□ 0.62
RPP40-201ENST00000319533 HLFQ16534 295 aa18.89■□□□□ 0.61
RPP40-201ENST00000319533 COL13A1Q5TAT6 717 aaPredicted RBP18.89■□□□□ 0.61
RPP40-201ENST00000319533 CHADLQ6NUI6 762 aa18.89■□□□□ 0.61
RPP40-201ENST00000319533 L3MBTL3Q96JM7 780 aaPredicted RBP18.89■□□□□ 0.61
RPP40-201ENST00000319533 PLEKHF1Q96S99 279 aa18.89■□□□□ 0.61
RPP40-201ENST00000319533 KDM3BQ7LBC6 1761 aa18.88■□□□□ 0.61
RPP40-201ENST00000319533 FKBP4Q02790 459 aaKnown RBP eCLIP18.88■□□□□ 0.61
RPP40-201ENST00000319533 MIS18AQ9NYP9 233 aa18.88■□□□□ 0.61
RPP40-201ENST00000319533 ERVV-1B6SEH8 477 aa18.87■□□□□ 0.61
RPP40-201ENST00000319533 RTKN2Q8IZC4 609 aa18.87■□□□□ 0.61
RPP40-201ENST00000319533 DLG5Q8TDM6 1919 aa18.87■□□□□ 0.61
RPP40-201ENST00000319533 SNED1Q8TER0 1413 aa18.86■□□□□ 0.61
RPP40-201ENST00000319533 POTEIP0CG38 1075 aa18.86■□□□□ 0.61
RPP40-201ENST00000319533 POTEJP0CG39 1038 aa18.86■□□□□ 0.61
RPP40-201ENST00000319533 ALDH1B1P30837 517 aa18.86■□□□□ 0.61
RPP40-201ENST00000319533 EIF4A1P60842 406 aaKnown RBP18.86■□□□□ 0.61
RPP40-201ENST00000319533 CRY2Q49AN0 593 aa18.86■□□□□ 0.61
RPP40-201ENST00000319533 SCN4AP35499 1836 aa18.86■□□□□ 0.61
RPP40-201ENST00000319533 IQCA1LA6NCM1 817 aa18.85■□□□□ 0.61
RPP40-201ENST00000319533 CREBZFQ9NS37 354 aa18.85■□□□□ 0.61
RPP40-201ENST00000319533 MAP3K15Q6ZN16 1313 aa18.84■□□□□ 0.61
RPP40-201ENST00000319533 NEFMP07197 916 aa18.84■□□□□ 0.61
RPP40-201ENST00000319533 NFE2L2Q16236 605 aa18.84■□□□□ 0.61
RPP40-201ENST00000319533 NYXQ9GZU5 481 aa18.84■□□□□ 0.61
RPP40-201ENST00000319533 TAF1DQ9H5J8 278 aaPredicted RBP18.84■□□□□ 0.61
RPP40-201ENST00000319533 ZNF277Q9NRM2 450 aaPredicted RBP18.84■□□□□ 0.61
RPP40-201ENST00000319533 RIC1Q4ADV7 1423 aa18.83■□□□□ 0.61
RPP40-201ENST00000319533 IBTKQ9P2D0 1353 aaPredicted RBP18.83■□□□□ 0.61
RPP40-201ENST00000319533 PASKQ96RG2 1323 aa18.83■□□□□ 0.61
RPP40-201ENST00000319533 FAM177BA6PVY3 158 aa18.83■□□□□ 0.6
RPP40-201ENST00000319533 HSPA1AP0DMV8 641 aaKnown RBP18.83■□□□□ 0.6
RPP40-201ENST00000319533 HSPA1BP0DMV9 641 aaKnown RBP18.83■□□□□ 0.6
RPP40-201ENST00000319533 OLFM4Q6UX06 510 aa18.83■□□□□ 0.6
RPP40-201ENST00000319533 LDHDQ86WU2 507 aa18.83■□□□□ 0.6
RPP40-201ENST00000319533 NUP98P52948 1817 aa18.83■□□□□ 0.6
RPP40-201ENST00000319533 ABCC12Q96J65 1359 aa18.82■□□□□ 0.6
RPP40-201ENST00000319533 PSMD1Q99460 953 aa18.82■□□□□ 0.6
RPP40-201ENST00000319533 ERBB4Q15303 1308 aa18.81■□□□□ 0.6
RPP40-201ENST00000319533 ZNF541Q9H0D2 1346 aa18.81■□□□□ 0.6
RPP40-201ENST00000319533 FZD9O00144 591 aa18.81■□□□□ 0.6
RPP40-201ENST00000319533 GTF2E1P29083 439 aaPredicted RBP18.81■□□□□ 0.6
RPP40-201ENST00000319533 HOXA10P31260 410 aaPredicted RBP18.81■□□□□ 0.6
RPP40-201ENST00000319533 IARSP41252 1262 aaKnown RBP18.81■□□□□ 0.6
RPP40-201ENST00000319533 TTLL7Q6ZT98 887 aa18.81■□□□□ 0.6
RPP40-201ENST00000319533 SYNE4Q8N205 404 aa18.81■□□□□ 0.6
RPP40-201ENST00000319533 PNNQ9H307 717 aaKnown RBP18.81■□□□□ 0.6
RPP40-201ENST00000319533 CC2D2BQ6DHV5 1058 aa18.8■□□□□ 0.6
RPP40-201ENST00000319533 KIF6Q6ZMV9 814 aa18.8■□□□□ 0.6
RPP40-201ENST00000319533 NUTM1Q86Y26 1132 aa18.8■□□□□ 0.6
RPP40-201ENST00000319533 THUMPD2Q9BTF0 503 aaKnown RBP18.8■□□□□ 0.6
RPP40-201ENST00000319533 RRP7AQ9Y3A4 280 aaKnown RBP18.8■□□□□ 0.6
RPP40-201ENST00000319533 UBN2Q6ZU65 1347 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms