RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 ZBTB3Q9H5J0 574 aa21.48■■□□□ 1.03
LRRC42-201ENST00000319223 MAP3K15Q6ZN16 1313 aa21.47■■□□□ 1.03
LRRC42-201ENST00000319223 GOLGA2Q08379 1002 aa21.47■■□□□ 1.03
LRRC42-201ENST00000319223 AIMP1Q12904 312 aaKnown RBP21.47■■□□□ 1.03
LRRC42-201ENST00000319223 TWISTNBQ3B726 338 aaPredicted RBP21.47■■□□□ 1.03
LRRC42-201ENST00000319223 XAGE3Q8WTP9 111 aa21.47■■□□□ 1.03
LRRC42-201ENST00000319223 CD2APQ9Y5K6 639 aa21.47■■□□□ 1.03
LRRC42-201ENST00000319223 TCERG1O14776 1098 aaKnown RBP21.46■■□□□ 1.03
LRRC42-201ENST00000319223 SERPINB2P05120 415 aa21.46■■□□□ 1.03
LRRC42-201ENST00000319223 CLEC4GQ6UXB4 293 aa21.46■■□□□ 1.03
LRRC42-201ENST00000319223 CDCA7LQ96GN5 454 aa21.46■■□□□ 1.03
LRRC42-201ENST00000319223 DBF4Q9UBU7 674 aaPredicted RBP21.46■■□□□ 1.03
LRRC42-201ENST00000319223 KIF6Q6ZMV9 814 aa21.46■■□□□ 1.03
LRRC42-201ENST00000319223 ERVV-1B6SEH8 477 aa21.45■■□□□ 1.02
LRRC42-201ENST00000319223 MYH16Q9H6N6 1097 aa21.45■■□□□ 1.02
LRRC42-201ENST00000319223 C10orf71Q711Q0 1435 aa21.45■■□□□ 1.02
LRRC42-201ENST00000319223 AFDNP55196 1824 aaKnown RBP21.45■■□□□ 1.02
LRRC42-201ENST00000319223 VAMP4O75379 141 aa21.43■■□□□ 1.02
LRRC42-201ENST00000319223 SETDB2Q96T68 719 aa21.43■■□□□ 1.02
LRRC42-201ENST00000319223 PHAXQ9H814 394 aaKnown RBP21.43■■□□□ 1.02
LRRC42-201ENST00000319223 ZNF652Q9Y2D9 606 aa21.43■■□□□ 1.02
LRRC42-201ENST00000319223 SLFN5Q08AF3 891 aa21.43■■□□□ 1.02
LRRC42-201ENST00000319223 CCDC30Q5VVM6 783 aa21.43■■□□□ 1.02
LRRC42-201ENST00000319223 CCDC24Q8N4L8 307 aa21.43■■□□□ 1.02
LRRC42-201ENST00000319223 NIP7Q9Y221 180 aaKnown RBP eCLIP21.43■■□□□ 1.02
LRRC42-201ENST00000319223 NRXN2Q9P2S2 1712 aa21.43■■□□□ 1.02
LRRC42-201ENST00000319223 RGL2O15211 777 aa21.42■■□□□ 1.02
LRRC42-201ENST00000319223 HYPKQ9NX55 129 aa21.42■■□□□ 1.02
LRRC42-201ENST00000319223 NUP98P52948 1817 aa21.42■■□□□ 1.02
LRRC42-201ENST00000319223 KIF13BQ9NQT8 1826 aa21.42■■□□□ 1.02
LRRC42-201ENST00000319223 GIGYF2Q6Y7W6 1299 aaKnown RBP21.41■■□□□ 1.02
LRRC42-201ENST00000319223 CARMIL3Q8ND23 1372 aa21.41■■□□□ 1.02
LRRC42-201ENST00000319223 KIAA1551Q9HCM1 1747 aa21.4■■□□□ 1.02
LRRC42-201ENST00000319223 E9PSI1 815 aa21.4■■□□□ 1.02
LRRC42-201ENST00000319223 GPTP24298 496 aa21.4■■□□□ 1.02
LRRC42-201ENST00000319223 PRR5LQ6MZQ0 368 aa21.4■■□□□ 1.02
LRRC42-201ENST00000319223 WWC3Q9ULE0 1092 aa21.4■■□□□ 1.02
LRRC42-201ENST00000319223 PXDNLA1KZ92 1463 aa21.39■■□□□ 1.01
LRRC42-201ENST00000319223 A0A0G2JLW4 131 aa21.39■■□□□ 1.01
LRRC42-201ENST00000319223 FAM177BA6PVY3 158 aa21.39■■□□□ 1.01
LRRC42-201ENST00000319223 HNRNPUQ00839 825 aaKnown RBP eCLIP21.39■■□□□ 1.01
LRRC42-201ENST00000319223 UBN2Q6ZU65 1347 aa21.39■■□□□ 1.01
LRRC42-201ENST00000319223 G2E3Q7L622 706 aa21.38■■□□□ 1.01
LRRC42-201ENST00000319223 ZNF34Q8IZ26 560 aa21.38■■□□□ 1.01
LRRC42-201ENST00000319223 TRMT2AQ8IZ69 625 aaKnown RBP21.38■■□□□ 1.01
LRRC42-201ENST00000319223 ATP10DQ9P241 1426 aa21.38■■□□□ 1.01
LRRC42-201ENST00000319223 DPEP1P16444 411 aa21.38■■□□□ 1.01
LRRC42-201ENST00000319223 ANKRD13DQ6ZTN6 518 aa21.38■■□□□ 1.01
LRRC42-201ENST00000319223 N4BP2Q86UW6 1770 aaPredicted RBP21.38■■□□□ 1.01
LRRC42-201ENST00000319223 SLC4A2P04920 1241 aa21.37■■□□□ 1.01
LRRC42-201ENST00000319223 KCNA3P22001 575 aa21.37■■□□□ 1.01
LRRC42-201ENST00000319223 TGFB2P61812 414 aa21.37■■□□□ 1.01
LRRC42-201ENST00000319223 NBPF5PQ86XG9 351 aaPredicted RBP21.37■■□□□ 1.01
LRRC42-201ENST00000319223 PLBD2Q8NHP8 589 aa21.37■■□□□ 1.01
LRRC42-201ENST00000319223 CHRNA5P30532 468 aa21.36■■□□□ 1.01
LRRC42-201ENST00000319223 STK31Q9BXU1 1019 aa21.36■■□□□ 1.01
LRRC42-201ENST00000319223 SUSD4Q5VX71 490 aa21.35■■□□□ 1.01
LRRC42-201ENST00000319223 CNBD1Q8NA66 436 aa21.35■■□□□ 1.01
LRRC42-201ENST00000319223 CHMP4AQ9BY43 222 aa21.35■■□□□ 1.01
LRRC42-201ENST00000319223 TCIRG1Q13488 830 aa21.35■■□□□ 1.01
LRRC42-201ENST00000319223 PELP1Q8IZL8 1130 aaKnown RBP21.35■■□□□ 1.01
LRRC42-201ENST00000319223 ZNF428Q96B54 188 aa21.35■■□□□ 1.01
LRRC42-201ENST00000319223 ANKRD31Q8N7Z5 1873 aa21.34■■□□□ 1.01
LRRC42-201ENST00000319223 YBX3P16989 372 aaKnown RBP eCLIP21.34■■□□□ 1.017e-7■■□□□ 11.7
LRRC42-201ENST00000319223 TPTE2Q6XPS3 522 aa21.33■■□□□ 1.01
LRRC42-201ENST00000319223 NUTM1Q86Y26 1132 aa21.33■■□□□ 1.01
LRRC42-201ENST00000319223 GOLGB1Q14789 3259 aaKnown RBP21.33■■□□□ 1
LRRC42-201ENST00000319223 NPHP1O15259 732 aa21.32■■□□□ 1
LRRC42-201ENST00000319223 GPR162Q16538 588 aa21.32■■□□□ 1
LRRC42-201ENST00000319223 RIC3Q7Z5B4 369 aa21.32■■□□□ 1
LRRC42-201ENST00000319223 BRIP1Q9BX63 1249 aa21.32■■□□□ 1
LRRC42-201ENST00000319223 ATP5J2-PTCD1G3V325 749 aa21.31■■□□□ 1
LRRC42-201ENST00000319223 NTSR2O95665 410 aa21.31■■□□□ 1
LRRC42-201ENST00000319223 ERFEQ4G0M1 354 aa21.31■■□□□ 1
LRRC42-201ENST00000319223 HSP90AB3PQ58FF7 597 aa21.31■■□□□ 1
LRRC42-201ENST00000319223 NLRP10Q86W26 655 aa21.31■■□□□ 1
LRRC42-201ENST00000319223 ANKRD36CQ5JPF3 1778 aa21.31■■□□□ 1
LRRC42-201ENST00000319223 ARFGEF2Q9Y6D5 1785 aa21.31■■□□□ 1
LRRC42-201ENST00000319223 ST5P78524 1137 aa21.3■■□□□ 1
LRRC42-201ENST00000319223 C2CD5Q86YS7 1000 aa21.3■■□□□ 1
LRRC42-201ENST00000319223 ISCA1Q9BUE6 129 aa21.3■■□□□ 1
LRRC42-201ENST00000319223 ABCC12Q96J65 1359 aa21.3■■□□□ 1
LRRC42-201ENST00000319223 ADCY9O60503 1353 aa21.29■■□□□ 1
LRRC42-201ENST00000319223 PI4KAP2A4QPH2 592 aa21.29■■□□□ 1
LRRC42-201ENST00000319223 FLIIQ13045 1269 aa21.29■■□□□ 1
LRRC42-201ENST00000319223 PARP10Q53GL7 1025 aa21.29■■□□□ 1
LRRC42-201ENST00000319223 PI4KAP1Q8N8J0 262 aa21.29■■□□□ 1
LRRC42-201ENST00000319223 SYNE4Q8N205 404 aa21.29■■□□□ 1
LRRC42-201ENST00000319223 NYXQ9GZU5 481 aa21.29■■□□□ 1
LRRC42-201ENST00000319223 MAP3K2Q9Y2U5 619 aa21.29■■□□□ 1
LRRC42-201ENST00000319223 GTF2E1P29083 439 aaPredicted RBP21.28■■□□□ 1
LRRC42-201ENST00000319223 KSR2Q6VAB6 950 aa21.28■■□□□ 1
LRRC42-201ENST00000319223 PPP1R42Q7Z4L9 355 aa21.28■■□□□ 1
LRRC42-201ENST00000319223 MYD88Q99836 296 aa21.28■■□□□ 1
LRRC42-201ENST00000319223 BRCA1P38398 1863 aaKnown RBP21.28■■□□□ 1
LRRC42-201ENST00000319223 DCAF8L1A6NGE4 600 aa21.27■■□□□ 1
LRRC42-201ENST00000319223 DDX58O95786 925 aaKnown RBP21.27■■□□□ 1
LRRC42-201ENST00000319223 PDE6BP35913 854 aa21.27■■□□□ 1
LRRC42-201ENST00000319223 UTP14AQ9BVJ6 771 aaKnown RBP21.27■■□□□ 1
LRRC42-201ENST00000319223 BCS1LQ9Y276 419 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms