RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 ATP6V1DQ9Y5K8 247 aa16.9■□□□□ 0.3
PABPC1-201ENST00000318607 IFIT2P09913 472 aaKnown RBP16.9■□□□□ 0.3
PABPC1-201ENST00000318607 RAB11FIP4Q86YS3 637 aa16.9■□□□□ 0.3
PABPC1-201ENST00000318607 KLHDC4Q8TBB5 520 aa16.9■□□□□ 0.3
PABPC1-201ENST00000318607 C9orf78Q9NZ63 289 aaPredicted RBP16.9■□□□□ 0.3
PABPC1-201ENST00000318607 USP16Q9Y5T5 823 aa16.9■□□□□ 0.3
PABPC1-201ENST00000318607 SETBP1Q9Y6X0 1596 aa16.89■□□□□ 0.3
PABPC1-201ENST00000318607 GNAI3P08754 354 aa16.89■□□□□ 0.29
PABPC1-201ENST00000318607 TYRO3Q06418 890 aa16.89■□□□□ 0.29
PABPC1-201ENST00000318607 SLC26A8Q96RN1 970 aa16.89■□□□□ 0.29
PABPC1-201ENST00000318607 SLC52A1Q9NWF4 448 aa16.89■□□□□ 0.29
PABPC1-201ENST00000318607 CLIP2Q9UDT6 1046 aa16.89■□□□□ 0.29
PABPC1-201ENST00000318607 CYP46A1Q9Y6A2 500 aa16.89■□□□□ 0.29
PABPC1-201ENST00000318607 ADGRB3O60242 1522 aa16.88■□□□□ 0.29
PABPC1-201ENST00000318607 SBNO2Q9Y2G9 1366 aa16.88■□□□□ 0.29
PABPC1-201ENST00000318607 CHL1O00533 1208 aa16.88■□□□□ 0.29
PABPC1-201ENST00000318607 ZNF165P49910 485 aa16.88■□□□□ 0.29
PABPC1-201ENST00000318607 HSP90AA4PQ58FG1 418 aa16.88■□□□□ 0.29
PABPC1-201ENST00000318607 TTC6Q86TZ1 520 aa16.88■□□□□ 0.29
PABPC1-201ENST00000318607 CNTROBQ8N137 903 aa16.88■□□□□ 0.29
PABPC1-201ENST00000318607 RHPN1Q8TCX5 695 aa16.88■□□□□ 0.29
PABPC1-201ENST00000318607 FAM227BQ96M60 508 aa16.88■□□□□ 0.29
PABPC1-201ENST00000318607 FTOQ9C0B1 505 aaKnown RBP eCLIP16.88■□□□□ 0.29
PABPC1-201ENST00000318607 CLTCQ00610 1675 aaKnown RBP16.88■□□□□ 0.29
PABPC1-201ENST00000318607 ZKSCAN1P17029 563 aaPredicted RBP16.88■□□□□ 0.29
PABPC1-201ENST00000318607 BIN1O00499 593 aa16.87■□□□□ 0.29
PABPC1-201ENST00000318607 KIAA1524Q8TCG1 905 aa16.87■□□□□ 0.29
PABPC1-201ENST00000318607 SHPRHQ149N8 1683 aa16.87■□□□□ 0.29
PABPC1-201ENST00000318607 SKIDA1Q1XH10 827 aa16.87■□□□□ 0.29
PABPC1-201ENST00000318607 CCAR2Q8N163 923 aaKnown RBP16.87■□□□□ 0.29
PABPC1-201ENST00000318607 YTHDC2Q9H6S0 1430 aaKnown RBP16.87■□□□□ 0.29
PABPC1-201ENST00000318607 PI4KAP2A4QPH2 592 aa16.87■□□□□ 0.29
PABPC1-201ENST00000318607 CHGBP05060 677 aa16.87■□□□□ 0.29
PABPC1-201ENST00000318607 KRT85P78386 507 aa16.87■□□□□ 0.29
PABPC1-201ENST00000318607 ME3Q16798 604 aa16.87■□□□□ 0.29
PABPC1-201ENST00000318607 AACSQ86V21 672 aa16.87■□□□□ 0.29
PABPC1-201ENST00000318607 PI4KAP1Q8N8J0 262 aa16.87■□□□□ 0.29
PABPC1-201ENST00000318607 MYOM2P54296 1465 aa16.87■□□□□ 0.29
PABPC1-201ENST00000318607 PIP4K2AP48426 406 aaPredicted RBP16.86■□□□□ 0.29
PABPC1-201ENST00000318607 CUL4AQ13619 759 aa16.86■□□□□ 0.29
PABPC1-201ENST00000318607 CCDC61Q9Y6R9 512 aa16.86■□□□□ 0.29
PABPC1-201ENST00000318607 WASLO00401 505 aaPredicted RBP16.86■□□□□ 0.29
PABPC1-201ENST00000318607 POLR3GO15318 223 aaPredicted RBP16.86■□□□□ 0.29
PABPC1-201ENST00000318607 JAK2O60674 1132 aa16.86■□□□□ 0.29
PABPC1-201ENST00000318607 ZRSR1Q15695 479 aaKnown RBP16.86■□□□□ 0.29
PABPC1-201ENST00000318607 FSD1Q9BTV5 496 aa16.86■□□□□ 0.29
PABPC1-201ENST00000318607 CBX8Q9HC52 389 aa16.86■□□□□ 0.29
PABPC1-201ENST00000318607 SOS1Q07889 1333 aaPredicted RBP16.86■□□□□ 0.29
PABPC1-201ENST00000318607 C3P01024 1663 aa16.86■□□□□ 0.29
PABPC1-201ENST00000318607 ATP8B2P98198 1209 aa16.85■□□□□ 0.29
PABPC1-201ENST00000318607 TAF6LQ9Y6J9 622 aa16.85■□□□□ 0.29
PABPC1-201ENST00000318607 CCDC30Q5VVM6 783 aa16.85■□□□□ 0.29
PABPC1-201ENST00000318607 LARP1Q6PKG0 1096 aaKnown RBP16.85■□□□□ 0.29
PABPC1-201ENST00000318607 GTF3C6Q969F1 213 aa16.85■□□□□ 0.29
PABPC1-201ENST00000318607 USP44Q9H0E7 712 aa16.85■□□□□ 0.29
PABPC1-201ENST00000318607 ABCC3O15438 1527 aa16.85■□□□□ 0.29
PABPC1-201ENST00000318607 USP27XA6NNY8 438 aa16.84■□□□□ 0.29
PABPC1-201ENST00000318607 CHST3Q7LGC8 479 aa16.84■□□□□ 0.29
PABPC1-201ENST00000318607 LRRC7Q96NW7 1537 aa16.84■□□□□ 0.29
PABPC1-201ENST00000318607 KIF1BO60333 1816 aa16.84■□□□□ 0.29
PABPC1-201ENST00000318607 NLRP6P59044 892 aa16.84■□□□□ 0.29
PABPC1-201ENST00000318607 CLASRPQ8N2M8 674 aaKnown RBP16.84■□□□□ 0.29
PABPC1-201ENST00000318607 INTS4Q96HW7 963 aaKnown RBP16.84■□□□□ 0.29
PABPC1-201ENST00000318607 MTMR6Q9Y217 621 aa16.84■□□□□ 0.29
PABPC1-201ENST00000318607 NR1I2O75469 434 aa16.84■□□□□ 0.29
PABPC1-201ENST00000318607 HSPA4P34932 840 aa16.84■□□□□ 0.29
PABPC1-201ENST00000318607 CCT2P78371 535 aaKnown RBP16.84■□□□□ 0.29
PABPC1-201ENST00000318607 TULP4Q9NRJ4 1543 aa16.83■□□□□ 0.29
PABPC1-201ENST00000318607 HOMER1Q86YM7 354 aa16.83■□□□□ 0.29
PABPC1-201ENST00000318607 UBR1Q8IWV7 1749 aa16.83■□□□□ 0.29
PABPC1-201ENST00000318607 DNAJC2Q99543 621 aaKnown RBP16.83■□□□□ 0.28
PABPC1-201ENST00000318607 PTCH1Q13635 1447 aa16.83■□□□□ 0.28
PABPC1-201ENST00000318607 ATP10DQ9P241 1426 aa16.83■□□□□ 0.28
PABPC1-201ENST00000318607 MAP3K19Q56UN5 1328 aa16.83■□□□□ 0.28
PABPC1-201ENST00000318607 CWF19L2Q2TBE0 894 aaKnown RBP16.83■□□□□ 0.28
PABPC1-201ENST00000318607 CACTINQ8WUQ7 758 aaKnown RBP16.83■□□□□ 0.28
PABPC1-201ENST00000318607 TPCN1Q9ULQ1 816 aa16.83■□□□□ 0.28
PABPC1-201ENST00000318607 ELF2Q15723 593 aa16.82■□□□□ 0.28
PABPC1-201ENST00000318607 SAMD1Q6SPF0 538 aaPredicted RBP16.82■□□□□ 0.28
PABPC1-201ENST00000318607 FAM200AQ8TCP9 573 aa16.82■□□□□ 0.28
PABPC1-201ENST00000318607 PTPRCP08575 1304 aa16.82■□□□□ 0.28
PABPC1-201ENST00000318607 SGSM2O43147 1006 aa16.82■□□□□ 0.28
PABPC1-201ENST00000318607 KCNQ3O43525 872 aa16.82■□□□□ 0.28
PABPC1-201ENST00000318607 TEFQ10587 303 aa16.82■□□□□ 0.28
PABPC1-201ENST00000318607 ZNF215Q9UL58 517 aaPredicted RBP16.82■□□□□ 0.28
PABPC1-201ENST00000318607 SMC2O95347 1197 aa16.82■□□□□ 0.28
PABPC1-201ENST00000318607 NCBP1Q09161 790 aaKnown RBP16.82■□□□□ 0.28
PABPC1-201ENST00000318607 RBM8AQ9Y5S9 174 aaKnown RBP16.82■□□□□ 0.28
PABPC1-201ENST00000318607 FAM135BQ49AJ0 1406 aa16.81■□□□□ 0.28
PABPC1-201ENST00000318607 TCHHQ07283 1943 aa16.81■□□□□ 0.28
PABPC1-201ENST00000318607 CCDC144BQ3MJ40 725 aa16.81■□□□□ 0.28
PABPC1-201ENST00000318607 CCDC144CPQ8IYA2 1237 aa16.81■□□□□ 0.28
PABPC1-201ENST00000318607 UVSSAQ2YD98 709 aa16.81■□□□□ 0.28
PABPC1-201ENST00000318607 CHPF2Q9P2E5 772 aa16.81■□□□□ 0.28
PABPC1-201ENST00000318607 BRPF1P55201 1214 aaPredicted RBP16.8■□□□□ 0.28
PABPC1-201ENST00000318607 GNL2Q13823 731 aaKnown RBP16.8■□□□□ 0.28
PABPC1-201ENST00000318607 CEP135Q66GS9 1140 aa16.8■□□□□ 0.28
PABPC1-201ENST00000318607 SDF4Q9BRK5 362 aa16.8■□□□□ 0.28
PABPC1-201ENST00000318607 SKILP12757 684 aa16.8■□□□□ 0.28
PABPC1-201ENST00000318607 FAM69CQ0P6D2 419 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms