RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 ZBTB7CA1YPR0 619 aa23.7■■□□□ 1.38
AP3S1-201ENST00000316788 KCNQ3O43525 872 aa23.7■■□□□ 1.38
AP3S1-201ENST00000316788 SIPA1L3O60292 1781 aaPredicted RBP23.7■■□□□ 1.38
AP3S1-201ENST00000316788 GIGYF1O75420 1035 aaPredicted RBP23.69■■□□□ 1.38
AP3S1-201ENST00000316788 KSR2Q6VAB6 950 aa23.69■■□□□ 1.38
AP3S1-201ENST00000316788 NUTM1Q86Y26 1132 aa23.69■■□□□ 1.38
AP3S1-201ENST00000316788 ERC1Q8IUD2 1116 aa23.69■■□□□ 1.38
AP3S1-201ENST00000316788 GLRX3O76003 335 aaKnown RBP23.68■■□□□ 1.38
AP3S1-201ENST00000316788 ADAMTS2O95450 1211 aa23.68■■□□□ 1.38
AP3S1-201ENST00000316788 ANKRD24Q8TF21 1146 aa23.68■■□□□ 1.38
AP3S1-201ENST00000316788 HYPKQ9NX55 129 aa23.68■■□□□ 1.38
AP3S1-201ENST00000316788 LRP6O75581 1613 aa23.68■■□□□ 1.38
AP3S1-201ENST00000316788 UTYO14607 1347 aa23.68■■□□□ 1.38
AP3S1-201ENST00000316788 MBD3O95983 291 aa23.67■■□□□ 1.38
AP3S1-201ENST00000316788 MPRIPQ6WCQ1 1025 aa23.67■■□□□ 1.38
AP3S1-201ENST00000316788 ZSCAN23Q3MJ62 389 aa23.67■■□□□ 1.38
AP3S1-201ENST00000316788 NASPP49321 788 aaPredicted RBP23.66■■□□□ 1.38
AP3S1-201ENST00000316788 CHRNA2Q15822 529 aa23.66■■□□□ 1.38
AP3S1-201ENST00000316788 ANP32BQ92688 251 aaKnown RBP23.64■■□□□ 1.38
AP3S1-201ENST00000316788 LSG1Q9H089 658 aaKnown RBP23.64■■□□□ 1.38
AP3S1-201ENST00000316788 CAVIN1Q6NZI2 390 aaKnown RBP23.64■■□□□ 1.37
AP3S1-201ENST00000316788 LINS1Q8NG48 757 aa23.64■■□□□ 1.37
AP3S1-201ENST00000316788 TRIM44Q96DX7 344 aaPredicted RBP23.64■■□□□ 1.37
AP3S1-201ENST00000316788 GPATCH3Q96I76 525 aa23.64■■□□□ 1.37
AP3S1-201ENST00000316788 MAP3K2Q9Y2U5 619 aa23.64■■□□□ 1.37
AP3S1-201ENST00000316788 SPATA31A6Q5VVP1 1343 aa23.63■■□□□ 1.37
AP3S1-201ENST00000316788 ESPNB1AK53 854 aa23.63■■□□□ 1.37
AP3S1-201ENST00000316788 PRPF40AO75400 957 aaKnown RBP23.63■■□□□ 1.37
AP3S1-201ENST00000316788 CLASRPQ8N2M8 674 aaKnown RBP23.63■■□□□ 1.37
AP3S1-201ENST00000316788 RUFY2Q8WXA3 655 aa23.63■■□□□ 1.37
AP3S1-201ENST00000316788 DDX58O95786 925 aaKnown RBP23.62■■□□□ 1.37
AP3S1-201ENST00000316788 GPT2Q8TD30 523 aa23.62■■□□□ 1.37
AP3S1-201ENST00000316788 IL25Q9H293 177 aa23.62■■□□□ 1.37
AP3S1-201ENST00000316788 DDX21Q9NR30 783 aaKnown RBP eCLIP23.62■■□□□ 1.37
AP3S1-201ENST00000316788 AK9Q5TCS8 1911 aa23.62■■□□□ 1.37
AP3S1-201ENST00000316788 KIAA1211Q6ZU35 1233 aa23.61■■□□□ 1.37
AP3S1-201ENST00000316788 TTC14Q96N46 770 aa23.61■■□□□ 1.37
AP3S1-201ENST00000316788 ECHDC1Q9NTX5 307 aa23.61■■□□□ 1.37
AP3S1-201ENST00000316788 C9orf78Q9NZ63 289 aaPredicted RBP23.61■■□□□ 1.37
AP3S1-201ENST00000316788 AXIN2Q9Y2T1 843 aa23.61■■□□□ 1.37
AP3S1-201ENST00000316788 SNX14Q9Y5W7 946 aa23.61■■□□□ 1.37
AP3S1-201ENST00000316788 WDR33Q9C0J8 1336 aaKnown RBP23.61■■□□□ 1.37
AP3S1-201ENST00000316788 KCNB2Q92953 911 aa23.6■■□□□ 1.37
AP3S1-201ENST00000316788 PRDM11Q9NQV5 511 aa23.6■■□□□ 1.37
AP3S1-201ENST00000316788 OS9Q13438 667 aaPredicted RBP23.59■■□□□ 1.37
AP3S1-201ENST00000316788 ERBB3P21860 1342 aa23.59■■□□□ 1.37
AP3S1-201ENST00000316788 ANXA1P04083 346 aa23.59■■□□□ 1.37
AP3S1-201ENST00000316788 ANO8Q9HCE9 1232 aaPredicted RBP23.59■■□□□ 1.37
AP3S1-201ENST00000316788 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.59■■□□□ 1.37
AP3S1-201ENST00000316788 CPDO75976 1380 aa23.58■■□□□ 1.37
AP3S1-201ENST00000316788 GRM8O00222 908 aa23.58■■□□□ 1.37
AP3S1-201ENST00000316788 NCLP19338 710 aaKnown RBP23.58■■□□□ 1.37
AP3S1-201ENST00000316788 HS1BP3Q53T59 392 aa23.58■■□□□ 1.37
AP3S1-201ENST00000316788 UPF3BQ9BZI7 483 aaKnown RBP23.58■■□□□ 1.37
AP3S1-201ENST00000316788 PROSER3Q2NL68 480 aa23.57■■□□□ 1.36
AP3S1-201ENST00000316788 TM6SF1Q9BZW5 370 aa23.57■■□□□ 1.36
AP3S1-201ENST00000316788 HIP1O00291 1037 aa23.56■■□□□ 1.36
AP3S1-201ENST00000316788 LRSAM1Q6UWE0 723 aa23.56■■□□□ 1.36
AP3S1-201ENST00000316788 EVI5LQ96CN4 794 aa23.56■■□□□ 1.36
AP3S1-201ENST00000316788 DIAPH3Q9NSV4 1193 aa23.56■■□□□ 1.36
AP3S1-201ENST00000316788 MRC1P22897 1456 aa23.56■■□□□ 1.36
AP3S1-201ENST00000316788 KLHL34Q8N239 644 aa23.56■■□□□ 1.36
AP3S1-201ENST00000316788 TMEM87AQ8NBN3 555 aa23.56■■□□□ 1.36
AP3S1-201ENST00000316788 C8orf37Q96NL8 207 aa23.56■■□□□ 1.36
AP3S1-201ENST00000316788 SNRKQ9NRH2 765 aa23.56■■□□□ 1.36
AP3S1-201ENST00000316788 IFIT2P09913 472 aaKnown RBP23.55■■□□□ 1.36
AP3S1-201ENST00000316788 LIMCH1Q9UPQ0 1083 aa23.55■■□□□ 1.36
AP3S1-201ENST00000316788 COL18A1P39060 1754 aa23.55■■□□□ 1.36
AP3S1-201ENST00000316788 MAP4K4O95819 1239 aaPredicted RBP23.54■■□□□ 1.36
AP3S1-201ENST00000316788 PDIA6Q15084 440 aa23.54■■□□□ 1.36
AP3S1-201ENST00000316788 SYAP1Q96A49 352 aaPredicted RBP23.54■■□□□ 1.36
AP3S1-201ENST00000316788 LARP1Q6PKG0 1096 aaKnown RBP23.53■■□□□ 1.36
AP3S1-201ENST00000316788 PDLIM2Q96JY6 352 aa23.53■■□□□ 1.36
AP3S1-201ENST00000316788 TMEM63CQ9P1W3 806 aa23.53■■□□□ 1.36
AP3S1-201ENST00000316788 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.53■■□□□ 1.36
AP3S1-201ENST00000316788 COL15A1P39059 1388 aa23.53■■□□□ 1.36
AP3S1-201ENST00000316788 MEX3CQ5U5Q3 659 aaKnown RBP23.53■■□□□ 1.36
AP3S1-201ENST00000316788 SUCLG2Q96I99 432 aa23.53■■□□□ 1.36
AP3S1-201ENST00000316788 SCN11AQ9UI33 1791 aa23.53■■□□□ 1.36
AP3S1-201ENST00000316788 KDM6AO15550 1401 aaPredicted RBP23.52■■□□□ 1.36
AP3S1-201ENST00000316788 RPAP1Q9BWH6 1393 aaPredicted RBP23.52■■□□□ 1.36
AP3S1-201ENST00000316788 ERBB4Q15303 1308 aa23.52■■□□□ 1.36
AP3S1-201ENST00000316788 RGPD5Q99666 1765 aa23.52■■□□□ 1.36
AP3S1-201ENST00000316788 ZNF790Q6PG37 636 aa23.52■■□□□ 1.36
AP3S1-201ENST00000316788 CWC27Q6UX04 472 aaKnown RBP23.52■■□□□ 1.36
AP3S1-201ENST00000316788 RBSNQ9H1K0 784 aa23.52■■□□□ 1.36
AP3S1-201ENST00000316788 SLC52A2Q9HAB3 445 aa23.52■■□□□ 1.36
AP3S1-201ENST00000316788 BTG4Q9NY30 223 aa23.52■■□□□ 1.36
AP3S1-201ENST00000316788 PRIM1P49642 420 aaKnown RBP23.51■■□□□ 1.35
AP3S1-201ENST00000316788 CWF19L2Q2TBE0 894 aaKnown RBP23.51■■□□□ 1.35
AP3S1-201ENST00000316788 VPS53Q5VIR6 699 aa23.51■■□□□ 1.35
AP3S1-201ENST00000316788 RASEFQ8IZ41 740 aa23.51■■□□□ 1.35
AP3S1-201ENST00000316788 RAPGEF4Q8WZA2 1011 aa23.51■■□□□ 1.35
AP3S1-201ENST00000316788 KAZALD1Q96I82 304 aa23.51■■□□□ 1.35
AP3S1-201ENST00000316788 ZSCAN31Q96LW9 406 aaPredicted RBP23.51■■□□□ 1.35
AP3S1-201ENST00000316788 SPG7Q9UQ90 795 aa23.51■■□□□ 1.35
AP3S1-201ENST00000316788 AK2P54819 239 aa23.5■■□□□ 1.35
AP3S1-201ENST00000316788 PHF14O94880 888 aa23.5■■□□□ 1.35
AP3S1-201ENST00000316788 G3BP1Q13283 466 aaKnown RBP eCLIP23.5■■□□□ 1.35
AP3S1-201ENST00000316788 NGLY1Q96IV0 654 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms