RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 FAM83GA6ND36 823 aa5.63□□□□□ -1.51
PTPN13-201ENST00000316707 HOXB7P09629 217 aa5.63□□□□□ -1.51
PTPN13-201ENST00000316707 SKILP12757 684 aa5.63□□□□□ -1.51
PTPN13-201ENST00000316707 LSG1Q9H089 658 aaKnown RBP5.63□□□□□ -1.51
PTPN13-201ENST00000316707 ZSWIM6Q9HCJ5 1215 aa5.63□□□□□ -1.51
PTPN13-201ENST00000316707 ECHDC1Q9NTX5 307 aa5.63□□□□□ -1.51
PTPN13-201ENST00000316707 ANO10Q9NW15 660 aa5.63□□□□□ -1.51
PTPN13-201ENST00000316707 SLFN14P0C7P3 912 aa5.63□□□□□ -1.51
PTPN13-201ENST00000316707 NME9Q86XW9 330 aa5.63□□□□□ -1.51
PTPN13-201ENST00000316707 MRVI1Q9Y6F6 885 aa5.63□□□□□ -1.51
PTPN13-201ENST00000316707 CASTP20810 708 aaKnown RBP5.63□□□□□ -1.51
PTPN13-201ENST00000316707 CD163L1Q9NR16 1453 aa5.63□□□□□ -1.51
PTPN13-201ENST00000316707 STX1AQ16623 288 aa5.63□□□□□ -1.51
PTPN13-201ENST00000316707 PLA2G4DQ86XP0 818 aa5.63□□□□□ -1.51
PTPN13-201ENST00000316707 CCDC83Q8IWF9 413 aa5.63□□□□□ -1.51
PTPN13-201ENST00000316707 CCDC150Q8NCX0 1101 aa5.63□□□□□ -1.51
PTPN13-201ENST00000316707 JAKMIP1Q96N16 626 aaKnown RBP5.63□□□□□ -1.51
PTPN13-201ENST00000316707 CBX8Q9HC52 389 aa5.63□□□□□ -1.51
PTPN13-201ENST00000316707 HYPKQ9NX55 129 aa5.63□□□□□ -1.51
PTPN13-201ENST00000316707 IMPACTQ9P2X3 320 aa5.63□□□□□ -1.51
PTPN13-201ENST00000316707 MROH1Q8NDA8 1641 aa5.63□□□□□ -1.51
PTPN13-201ENST00000316707 PSDA5PKW4 1024 aaPredicted RBP5.63□□□□□ -1.51
PTPN13-201ENST00000316707 NUTM2DQ5VT03 806 aaPredicted RBP5.63□□□□□ -1.51
PTPN13-201ENST00000316707 BLOC1S2Q6QNY1 142 aa5.63□□□□□ -1.51
PTPN13-201ENST00000316707 CWC15Q9P013 229 aaKnown RBP5.63□□□□□ -1.51
PTPN13-201ENST00000316707 USP42Q9H9J4 1324 aaKnown RBP5.62□□□□□ -1.51
PTPN13-201ENST00000316707 EVI5LQ96CN4 794 aa5.62□□□□□ -1.51
PTPN13-201ENST00000316707 ZNF215Q9UL58 517 aaPredicted RBP5.62□□□□□ -1.51
PTPN13-201ENST00000316707 ZBTB7CA1YPR0 619 aa5.62□□□□□ -1.51
PTPN13-201ENST00000316707 KINO60870 393 aaKnown RBP5.62□□□□□ -1.51
PTPN13-201ENST00000316707 MTX1Q13505 466 aa5.62□□□□□ -1.51
PTPN13-201ENST00000316707 ANO6Q4KMQ2 910 aa5.62□□□□□ -1.51
PTPN13-201ENST00000316707 OS9Q13438 667 aaPredicted RBP5.62□□□□□ -1.51
PTPN13-201ENST00000316707 POLA2Q14181 598 aa5.62□□□□□ -1.51
PTPN13-201ENST00000316707 DCTN1Q14203 1278 aa5.62□□□□□ -1.51
PTPN13-201ENST00000316707 TMCO3Q6UWJ1 677 aa5.62□□□□□ -1.51
PTPN13-201ENST00000316707 RASEFQ8IZ41 740 aa5.62□□□□□ -1.51
PTPN13-201ENST00000316707 UBXN4Q92575 508 aa5.62□□□□□ -1.51
PTPN13-201ENST00000316707 L2HGDHQ9H9P8 463 aa5.62□□□□□ -1.51
PTPN13-201ENST00000316707 EIF4A2Q14240 407 aaKnown RBP5.62□□□□□ -1.51
PTPN13-201ENST00000316707 NYAP1Q6ZVC0 841 aa5.62□□□□□ -1.51
PTPN13-201ENST00000316707 LUZP1Q86V48 1076 aa5.62□□□□□ -1.51
PTPN13-201ENST00000316707 TICAM2Q86XR7 235 aa5.62□□□□□ -1.51
PTPN13-201ENST00000316707 NUDT16Q96DE0 195 aaKnown RBP5.62□□□□□ -1.51
PTPN13-201ENST00000316707 ZNF396Q96N95 335 aaPredicted RBP5.62□□□□□ -1.51
PTPN13-201ENST00000316707 PTPRMP28827 1452 aa5.62□□□□□ -1.51
PTPN13-201ENST00000316707 SFPQP23246 707 aaKnown RBP eCLIP5.62□□□□□ -1.51
PTPN13-201ENST00000316707 KRT24Q2M2I5 525 aa5.62□□□□□ -1.51
PTPN13-201ENST00000316707 TXLNBQ8N3L3 684 aa5.62□□□□□ -1.51
PTPN13-201ENST00000316707 ADGRL3Q9HAR2 1447 aa5.62□□□□□ -1.51
PTPN13-201ENST00000316707 TUBB4BP68371 445 aa5.62□□□□□ -1.51
PTPN13-201ENST00000316707 CTR9Q6PD62 1173 aa5.62□□□□□ -1.51
PTPN13-201ENST00000316707 MCM10Q7L590 875 aa5.62□□□□□ -1.51
PTPN13-201ENST00000316707 ZNF592Q92610 1267 aa5.62□□□□□ -1.51
PTPN13-201ENST00000316707 LRRFIP2Q9Y608 721 aaKnown RBP5.62□□□□□ -1.51
PTPN13-201ENST00000316707 GLI2P10070 1586 aa5.61□□□□□ -1.51
PTPN13-201ENST00000316707 GOLGA6L9A6NEM1 432 aa5.61□□□□□ -1.51
PTPN13-201ENST00000316707 SRGAP3O43295 1099 aa5.61□□□□□ -1.51
PTPN13-201ENST00000316707 IFIT2P09913 472 aaKnown RBP5.61□□□□□ -1.51
PTPN13-201ENST00000316707 PRPF40BQ6NWY9 871 aaKnown RBP5.61□□□□□ -1.51
PTPN13-201ENST00000316707 CCAR2Q8N163 923 aaKnown RBP5.61□□□□□ -1.51
PTPN13-201ENST00000316707 CACTINQ8WUQ7 758 aaKnown RBP5.61□□□□□ -1.51
PTPN13-201ENST00000316707 LEO1Q8WVC0 666 aaPredicted RBP5.61□□□□□ -1.51
PTPN13-201ENST00000316707 HECW2Q9P2P5 1572 aa5.61□□□□□ -1.51
PTPN13-201ENST00000316707 CCDC69A6NI79 296 aa5.61□□□□□ -1.51
PTPN13-201ENST00000316707 F6X3S4 739 aa5.61□□□□□ -1.51
PTPN13-201ENST00000316707 USP44Q9H0E7 712 aa5.61□□□□□ -1.51
PTPN13-201ENST00000316707 JAKMIP3Q5VZ66 844 aa5.61□□□□□ -1.51
PTPN13-201ENST00000316707 PPP1R42Q7Z4L9 355 aa5.61□□□□□ -1.51
PTPN13-201ENST00000316707 NOL10Q9BSC4 688 aaKnown RBP5.61□□□□□ -1.51
PTPN13-201ENST00000316707 IL1RAPL2Q9NP60 686 aa5.61□□□□□ -1.51
PTPN13-201ENST00000316707 DLC1Q96QB1 1528 aa5.61□□□□□ -1.51
PTPN13-201ENST00000316707 ABCA9Q8IUA7 1624 aa5.61□□□□□ -1.51
PTPN13-201ENST00000316707 PNMA6EA0A0J9YXQ4 647 aa5.61□□□□□ -1.51
PTPN13-201ENST00000316707 MYO1BO43795 1136 aa5.61□□□□□ -1.51
PTPN13-201ENST00000316707 ALDH1L1O75891 902 aa5.61□□□□□ -1.51
PTPN13-201ENST00000316707 CKAP2LQ8IYA6 745 aa5.61□□□□□ -1.51
PTPN13-201ENST00000316707 MNS1Q8NEH6 495 aa5.61□□□□□ -1.51
PTPN13-201ENST00000316707 OSBPL5Q9H0X9 879 aaPredicted RBP5.61□□□□□ -1.51
PTPN13-201ENST00000316707 NEXMIFQ5QGS0 1516 aa5.61□□□□□ -1.51
PTPN13-201ENST00000316707 LRRC8AQ8IWT6 810 aa5.61□□□□□ -1.51
PTPN13-201ENST00000316707 TSGA10IPQ3SY00 556 aa5.6□□□□□ -1.51
PTPN13-201ENST00000316707 NAA16Q6N069 864 aaPredicted RBP5.6□□□□□ -1.51
PTPN13-201ENST00000316707 MAP4K1Q92918 833 aa5.6□□□□□ -1.51
PTPN13-201ENST00000316707 FRMPD1Q5SYB0 1578 aa5.6□□□□□ -1.51
PTPN13-201ENST00000316707 TTC21AQ8NDW8 1320 aa5.6□□□□□ -1.51
PTPN13-201ENST00000316707 PI4K2BQ8TCG2 481 aa5.6□□□□□ -1.51
PTPN13-201ENST00000316707 SNRKQ9NRH2 765 aa5.6□□□□□ -1.51
PTPN13-201ENST00000316707 PLEKHG3A1L390 1219 aa5.6□□□□□ -1.51
PTPN13-201ENST00000316707 H3BQV1 296 aa5.6□□□□□ -1.51
PTPN13-201ENST00000316707 TUBBP07437 444 aa5.6□□□□□ -1.51
PTPN13-201ENST00000316707 SNW1Q13573 536 aaKnown RBP5.6□□□□□ -1.51
PTPN13-201ENST00000316707 IFFO2Q5TF58 517 aa5.6□□□□□ -1.51
PTPN13-201ENST00000316707 CWC27Q6UX04 472 aaKnown RBP5.6□□□□□ -1.51
PTPN13-201ENST00000316707 FERMT3Q86UX7 667 aa5.6□□□□□ -1.51
PTPN13-201ENST00000316707 FCHSD1Q86WN1 690 aa5.6□□□□□ -1.51
PTPN13-201ENST00000316707 UNC5CLQ8IV45 518 aa5.6□□□□□ -1.51
PTPN13-201ENST00000316707 LLPHQ9BRT6 129 aaKnown RBP5.6□□□□□ -1.51
PTPN13-201ENST00000316707 CYP2C19P33261 490 aa5.6□□□□□ -1.51
PTPN13-201ENST00000316707 WAPLQ7Z5K2 1190 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms