RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 NPM2Q86SE8 214 aaKnown RBP20.4■□□□□ 0.86
TUBB3-201ENST00000315491 PROM2Q8N271 834 aa20.39■□□□□ 0.86
TUBB3-201ENST00000315491 KIF6Q6ZMV9 814 aa20.39■□□□□ 0.85
TUBB3-201ENST00000315491 MYH14Q7Z406 1995 aaKnown RBP20.38■□□□□ 0.85
TUBB3-201ENST00000315491 ATP10DQ9P241 1426 aa20.38■□□□□ 0.85
TUBB3-201ENST00000315491 TAF1LQ8IZX4 1826 aa20.38■□□□□ 0.85
TUBB3-201ENST00000315491 HMGB2P26583 209 aaKnown RBP20.38■□□□□ 0.85
TUBB3-201ENST00000315491 BEND3Q5T5X7 828 aa20.38■□□□□ 0.85
TUBB3-201ENST00000315491 METTL22Q9BUU2 404 aaPredicted RBP20.37■□□□□ 0.85
TUBB3-201ENST00000315491 SRCIN1Q9C0H9 1055 aa20.37■□□□□ 0.85
TUBB3-201ENST00000315491 ZBTB3Q9H5J0 574 aa20.37■□□□□ 0.85
TUBB3-201ENST00000315491 C4BP0C0L5 1744 aa20.37■□□□□ 0.85
TUBB3-201ENST00000315491 RPS6KA4O75676 772 aa20.36■□□□□ 0.85
TUBB3-201ENST00000315491 SF3B2Q13435 895 aaKnown RBP20.36■□□□□ 0.85
TUBB3-201ENST00000315491 ARXQ96QS3 562 aa20.36■□□□□ 0.85
TUBB3-201ENST00000315491 CHMP4BQ9H444 224 aaKnown RBP20.36■□□□□ 0.85
TUBB3-201ENST00000315491 EP400Q96L91 3159 aa20.36■□□□□ 0.85
TUBB3-201ENST00000315491 ZBTB7BO15156 539 aaPredicted RBP20.36■□□□□ 0.85
TUBB3-201ENST00000315491 DZIP3Q86Y13 1208 aaKnown RBP20.36■□□□□ 0.85
TUBB3-201ENST00000315491 AK7Q96M32 723 aa20.36■□□□□ 0.85
TUBB3-201ENST00000315491 MAP3K15Q6ZN16 1313 aa20.36■□□□□ 0.85
TUBB3-201ENST00000315491 COL15A1P39059 1388 aa20.36■□□□□ 0.85
TUBB3-201ENST00000315491 RGPD3A6NKT7 1758 aaPredicted RBP20.36■□□□□ 0.85
TUBB3-201ENST00000315491 RGPD4Q7Z3J3 1758 aa20.36■□□□□ 0.85
TUBB3-201ENST00000315491 GNPATO15228 680 aa20.35■□□□□ 0.85
TUBB3-201ENST00000315491 NEXNQ0ZGT2 675 aa20.35■□□□□ 0.85
TUBB3-201ENST00000315491 AAMPQ13685 434 aa20.35■□□□□ 0.85
TUBB3-201ENST00000315491 MYD88Q99836 296 aa20.35■□□□□ 0.85
TUBB3-201ENST00000315491 N4BP2Q86UW6 1770 aaPredicted RBP20.34■□□□□ 0.85
TUBB3-201ENST00000315491 A0A087WZG4 1122 aa20.34■□□□□ 0.85
TUBB3-201ENST00000315491 LINS1Q8NG48 757 aa20.34■□□□□ 0.85
TUBB3-201ENST00000315491 PPP4R2Q9NY27 417 aa20.34■□□□□ 0.85
TUBB3-201ENST00000315491 TBC1D2BQ9UPU7 963 aa20.34■□□□□ 0.85
TUBB3-201ENST00000315491 RTCBQ9Y3I0 505 aaKnown RBP20.34■□□□□ 0.85
TUBB3-201ENST00000315491 ARFGEF2Q9Y6D5 1785 aa20.34■□□□□ 0.85
TUBB3-201ENST00000315491 ALDH1L1O75891 902 aa20.34■□□□□ 0.85
TUBB3-201ENST00000315491 NUP188Q5SRE5 1749 aa20.33■□□□□ 0.85
TUBB3-201ENST00000315491 ERVV-1B6SEH8 477 aa20.33■□□□□ 0.84
TUBB3-201ENST00000315491 EN1Q05925 392 aaPredicted RBP20.33■□□□□ 0.84
TUBB3-201ENST00000315491 CAMKK2Q96RR4 588 aa20.33■□□□□ 0.84
TUBB3-201ENST00000315491 ZBTB40Q9NUA8 1239 aa20.33■□□□□ 0.84
TUBB3-201ENST00000315491 IGKV5-2P06315 115 aa20.32■□□□□ 0.84
TUBB3-201ENST00000315491 BAG6P46379 1132 aa20.32■□□□□ 0.84
TUBB3-201ENST00000315491 EZH2Q15910 746 aaKnown RBP20.31■□□□□ 0.84
TUBB3-201ENST00000315491 CWF19L2Q2TBE0 894 aaKnown RBP20.31■□□□□ 0.84
TUBB3-201ENST00000315491 GIGYF2Q6Y7W6 1299 aaKnown RBP20.31■□□□□ 0.84
TUBB3-201ENST00000315491 MEIS3Q99687 375 aa20.31■□□□□ 0.84
TUBB3-201ENST00000315491 NEURL1BA8MQ27 555 aa20.31■□□□□ 0.84
TUBB3-201ENST00000315491 HLFQ16534 295 aa20.31■□□□□ 0.84
TUBB3-201ENST00000315491 CAMTA2O94983 1202 aa20.3■□□□□ 0.84
TUBB3-201ENST00000315491 TCIRG1Q13488 830 aa20.3■□□□□ 0.84
TUBB3-201ENST00000315491 HSP90AB3PQ58FF7 597 aa20.3■□□□□ 0.84
TUBB3-201ENST00000315491 SMIM5Q71RC9 77 aa20.3■□□□□ 0.84
TUBB3-201ENST00000315491 CCDC125Q86Z20 511 aa20.3■□□□□ 0.84
TUBB3-201ENST00000315491 IBTKQ9P2D0 1353 aaPredicted RBP20.3■□□□□ 0.84
TUBB3-201ENST00000315491 ATP5J2-PTCD1G3V325 749 aa20.29■□□□□ 0.84
TUBB3-201ENST00000315491 AMIGO3Q86WK7 504 aa20.29■□□□□ 0.84
TUBB3-201ENST00000315491 GNAI3P08754 354 aa20.29■□□□□ 0.84
TUBB3-201ENST00000315491 ISCA1Q9BUE6 129 aa20.29■□□□□ 0.84
TUBB3-201ENST00000315491 USP44Q9H0E7 712 aa20.29■□□□□ 0.84
TUBB3-201ENST00000315491 PHF14O94880 888 aa20.28■□□□□ 0.84
TUBB3-201ENST00000315491 ADRA2BP18089 450 aa20.28■□□□□ 0.84
TUBB3-201ENST00000315491 TRAPPC3LQ5T215 181 aa20.28■□□□□ 0.84
TUBB3-201ENST00000315491 DEFB132Q7Z7B7 95 aa20.28■□□□□ 0.84
TUBB3-201ENST00000315491 ARHGEF1Q92888 912 aaKnown RBP20.28■□□□□ 0.84
TUBB3-201ENST00000315491 AKT1S1Q96B36 256 aa20.28■□□□□ 0.84
TUBB3-201ENST00000315491 GCKRQ14397 625 aa20.27■□□□□ 0.84
TUBB3-201ENST00000315491 NARFQ9UHQ1 456 aa20.27■□□□□ 0.84
TUBB3-201ENST00000315491 SSFA2P28290 1259 aa20.26■□□□□ 0.83
TUBB3-201ENST00000315491 ZNF827Q17R98 1081 aa20.26■□□□□ 0.83
TUBB3-201ENST00000315491 CCDC136Q96JN2 1154 aa20.26■□□□□ 0.83
TUBB3-201ENST00000315491 C1orf115Q9H7X2 142 aa20.26■□□□□ 0.83
TUBB3-201ENST00000315491 C9orf78Q9NZ63 289 aaPredicted RBP20.26■□□□□ 0.83
TUBB3-201ENST00000315491 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.26■□□□□ 0.83
TUBB3-201ENST00000315491 GRM8O00222 908 aa20.26■□□□□ 0.83
TUBB3-201ENST00000315491 RGL2O15211 777 aa20.26■□□□□ 0.83
TUBB3-201ENST00000315491 UBTFL1P0CB47 393 aaPredicted RBP20.26■□□□□ 0.83
TUBB3-201ENST00000315491 TRIM28Q13263 835 aaKnown RBP20.26■□□□□ 0.83
TUBB3-201ENST00000315491 B4GALNT3Q6L9W6 998 aa20.26■□□□□ 0.83
TUBB3-201ENST00000315491 CCDC191Q8NCU4 936 aa20.26■□□□□ 0.83
TUBB3-201ENST00000315491 CWC25Q9NXE8 425 aaPredicted RBP20.26■□□□□ 0.83
TUBB3-201ENST00000315491 ZNF652Q9Y2D9 606 aa20.26■□□□□ 0.83
TUBB3-201ENST00000315491 PCDHB15Q9Y5E8 787 aa20.26■□□□□ 0.83
TUBB3-201ENST00000315491 BCORQ6W2J9 1755 aa20.25■□□□□ 0.83
TUBB3-201ENST00000315491 UBR3Q6ZT12 1888 aa20.25■□□□□ 0.83
TUBB3-201ENST00000315491 ZPR1O75312 459 aa20.24■□□□□ 0.83
TUBB3-201ENST00000315491 GNAI2P04899 355 aa20.24■□□□□ 0.83
TUBB3-201ENST00000315491 NBPF7P0C2Y1 421 aaPredicted RBP20.24■□□□□ 0.83
TUBB3-201ENST00000315491 RFC4P35249 363 aa20.24■□□□□ 0.83
TUBB3-201ENST00000315491 CLEC4GQ6UXB4 293 aa20.24■□□□□ 0.83
TUBB3-201ENST00000315491 SRP68Q9UHB9 627 aaKnown RBP20.24■□□□□ 0.83
TUBB3-201ENST00000315491 UTYO14607 1347 aa20.24■□□□□ 0.83
TUBB3-201ENST00000315491 GPTP24298 496 aa20.23■□□□□ 0.83
TUBB3-201ENST00000315491 USPL1Q5W0Q7 1092 aa20.23■□□□□ 0.83
TUBB3-201ENST00000315491 ZNF34Q8IZ26 560 aa20.23■□□□□ 0.83
TUBB3-201ENST00000315491 TFCP2L1Q9NZI6 479 aa20.23■□□□□ 0.83
TUBB3-201ENST00000315491 USP42Q9H9J4 1324 aaKnown RBP20.23■□□□□ 0.83
TUBB3-201ENST00000315491 SCN7AQ01118 1682 aa20.23■□□□□ 0.83
TUBB3-201ENST00000315491 BCL2L12Q9HB09 334 aa20.23■□□□□ 0.83
TUBB3-201ENST00000315491 NUP98P52948 1817 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms