RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 USP26Q9BXU7 913 aa22.56■■□□□ 1.2
CCDC43-201ENST00000315286 TMOD3Q9NYL9 352 aa22.56■■□□□ 1.2
CCDC43-201ENST00000315286 PA2G4Q9UQ80 394 aaKnown RBP22.56■■□□□ 1.2
CCDC43-201ENST00000315286 ARFGEF2Q9Y6D5 1785 aa22.55■■□□□ 1.2
CCDC43-201ENST00000315286 TNS2Q63HR2 1409 aa22.55■■□□□ 1.2
CCDC43-201ENST00000315286 AOX1Q06278 1338 aa22.55■■□□□ 1.2
CCDC43-201ENST00000315286 OS9Q13438 667 aaPredicted RBP22.55■■□□□ 1.2
CCDC43-201ENST00000315286 PLBD2Q8NHP8 589 aa22.55■■□□□ 1.2
CCDC43-201ENST00000315286 ANTXR1Q9H6X2 564 aa22.55■■□□□ 1.2
CCDC43-201ENST00000315286 A1BGP04217 495 aa22.54■■□□□ 1.2
CCDC43-201ENST00000315286 NFKBIBQ15653 356 aa22.54■■□□□ 1.2
CCDC43-201ENST00000315286 SNX21Q969T3 373 aa22.54■■□□□ 1.2
CCDC43-201ENST00000315286 DISP2A7MBM2 1401 aa22.54■■□□□ 1.2
CCDC43-201ENST00000315286 HSCBQ8IWL3 235 aa22.54■■□□□ 1.2
CCDC43-201ENST00000315286 AFDNP55196 1824 aaKnown RBP22.53■■□□□ 1.2
CCDC43-201ENST00000315286 TRIM6-TRIM34B2RNG4 842 aa22.53■■□□□ 1.2
CCDC43-201ENST00000315286 SPRYD3Q8NCJ5 442 aa22.53■■□□□ 1.2
CCDC43-201ENST00000315286 RILPL2Q969X0 211 aa22.53■■□□□ 1.2
CCDC43-201ENST00000315286 ATP5J2-PTCD1G3V325 749 aa22.53■■□□□ 1.2
CCDC43-201ENST00000315286 UNC5CLQ8IV45 518 aa22.53■■□□□ 1.2
CCDC43-201ENST00000315286 ERC2O15083 957 aa22.52■■□□□ 1.2
CCDC43-201ENST00000315286 EPHA10Q5JZY3 1008 aa22.52■■□□□ 1.2
CCDC43-201ENST00000315286 PIGBQ92521 554 aa22.52■■□□□ 1.2
CCDC43-201ENST00000315286 JARID2Q92833 1246 aaPredicted RBP22.52■■□□□ 1.2
CCDC43-201ENST00000315286 RBM42Q9BTD8 480 aaKnown RBP22.52■■□□□ 1.2
CCDC43-201ENST00000315286 TTLL7Q6ZT98 887 aa22.51■■□□□ 1.19
CCDC43-201ENST00000315286 PI4K2BQ8TCG2 481 aa22.51■■□□□ 1.19
CCDC43-201ENST00000315286 ASAP1Q9ULH1 1129 aa22.51■■□□□ 1.19
CCDC43-201ENST00000315286 KAT6BQ8WYB5 2073 aa22.5■■□□□ 1.19
CCDC43-201ENST00000315286 REC8O95072 547 aa22.5■■□□□ 1.19
CCDC43-201ENST00000315286 ERC1Q8IUD2 1116 aa22.5■■□□□ 1.19
CCDC43-201ENST00000315286 ADAMTS2O95450 1211 aa22.5■■□□□ 1.19
CCDC43-201ENST00000315286 CLASRPQ8N2M8 674 aaKnown RBP22.5■■□□□ 1.19
CCDC43-201ENST00000315286 PHLPP1O60346 1717 aa22.49■■□□□ 1.19
CCDC43-201ENST00000315286 ITGB4P16144 1822 aa22.49■■□□□ 1.19
CCDC43-201ENST00000315286 CHMLP26374 656 aa22.49■■□□□ 1.19
CCDC43-201ENST00000315286 UBE3BQ7Z3V4 1068 aa22.48■■□□□ 1.19
CCDC43-201ENST00000315286 ESYT1Q9BSJ8 1104 aa22.48■■□□□ 1.19
CCDC43-201ENST00000315286 A0A087WZG4 1122 aa22.48■■□□□ 1.19
CCDC43-201ENST00000315286 EXOC5O00471 708 aa22.48■■□□□ 1.19
CCDC43-201ENST00000315286 CD2BP2O95400 341 aaKnown RBP22.48■■□□□ 1.19
CCDC43-201ENST00000315286 ATG3Q9NT62 314 aa22.48■■□□□ 1.19
CCDC43-201ENST00000315286 SASH1O94885 1247 aa22.47■■□□□ 1.19
CCDC43-201ENST00000315286 G3BP1Q13283 466 aaKnown RBP eCLIP22.47■■□□□ 1.19
CCDC43-201ENST00000315286 USP42Q9H9J4 1324 aaKnown RBP22.47■■□□□ 1.19
CCDC43-201ENST00000315286 PLCH1Q4KWH8 1693 aa22.46■■□□□ 1.19
CCDC43-201ENST00000315286 MAP4K4O95819 1239 aaPredicted RBP22.46■■□□□ 1.19
CCDC43-201ENST00000315286 KLHDC4Q8TBB5 520 aa22.46■■□□□ 1.19
CCDC43-201ENST00000315286 AK9Q5TCS8 1911 aa22.46■■□□□ 1.19
CCDC43-201ENST00000315286 NUP188Q5SRE5 1749 aa22.46■■□□□ 1.19
CCDC43-201ENST00000315286 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.46■■□□□ 1.19
CCDC43-201ENST00000315286 CASP7P55210 303 aa22.45■■□□□ 1.18
CCDC43-201ENST00000315286 SIL1Q9H173 461 aa22.45■■□□□ 1.18
CCDC43-201ENST00000315286 TTC41PQ6P2S7 1318 aa22.45■■□□□ 1.18
CCDC43-201ENST00000315286 FRAT2O75474 233 aaPredicted RBP22.45■■□□□ 1.18
CCDC43-201ENST00000315286 DNAJC10Q8IXB1 793 aa22.45■■□□□ 1.18
CCDC43-201ENST00000315286 ZBTB3Q9H5J0 574 aa22.45■■□□□ 1.18
CCDC43-201ENST00000315286 COL15A1P39059 1388 aa22.44■■□□□ 1.18
CCDC43-201ENST00000315286 RABEP1Q15276 862 aa22.44■■□□□ 1.18
CCDC43-201ENST00000315286 RABL6Q3YEC7 729 aaPredicted RBP22.44■■□□□ 1.18
CCDC43-201ENST00000315286 VSIG10Q8N0Z9 540 aa22.44■■□□□ 1.18
CCDC43-201ENST00000315286 IFIT2P09913 472 aaKnown RBP22.43■■□□□ 1.18
CCDC43-201ENST00000315286 PIP4K2BP78356 416 aa22.43■■□□□ 1.18
CCDC43-201ENST00000315286 AACSQ86V21 672 aa22.43■■□□□ 1.18
CCDC43-201ENST00000315286 WNK3Q9BYP7 1800 aa22.43■■□□□ 1.18
CCDC43-201ENST00000315286 H7C1W4 665 aa22.43■■□□□ 1.18
CCDC43-201ENST00000315286 TEX13AQ9BXU3 409 aaPredicted RBP22.43■■□□□ 1.18
CCDC43-201ENST00000315286 GLRX3O76003 335 aaKnown RBP22.42■■□□□ 1.18
CCDC43-201ENST00000315286 RFX5P48382 616 aaPredicted RBP22.42■■□□□ 1.18
CCDC43-201ENST00000315286 EAF2Q96CJ1 260 aaPredicted RBP22.42■■□□□ 1.18
CCDC43-201ENST00000315286 ECHDC1Q9NTX5 307 aa22.42■■□□□ 1.18
CCDC43-201ENST00000315286 BCL9O00512 1426 aa22.42■■□□□ 1.18
CCDC43-201ENST00000315286 NUTM2BA6NNL0 878 aaPredicted RBP22.42■■□□□ 1.18
CCDC43-201ENST00000315286 NUTM2EB1AL46 878 aaPredicted RBP22.42■■□□□ 1.18
CCDC43-201ENST00000315286 NUTM2AQ8IVF1 878 aaPredicted RBP22.42■■□□□ 1.18
CCDC43-201ENST00000315286 COPRSQ9NQ92 184 aa22.42■■□□□ 1.18
CCDC43-201ENST00000315286 CWC25Q9NXE8 425 aaPredicted RBP22.42■■□□□ 1.18
CCDC43-201ENST00000315286 CNTROBQ8N137 903 aa22.41■■□□□ 1.18
CCDC43-201ENST00000315286 SPATA31A1Q5TZJ5 1347 aa22.41■■□□□ 1.18
CCDC43-201ENST00000315286 K7ELQ4 463 aaPredicted RBP22.4■■□□□ 1.18
CCDC43-201ENST00000315286 PTPN12Q05209 780 aaKnown RBP22.4■■□□□ 1.18
CCDC43-201ENST00000315286 NRAPQ86VF7 1730 aa22.4■■□□□ 1.18
CCDC43-201ENST00000315286 LRP6O75581 1613 aa22.4■■□□□ 1.18
CCDC43-201ENST00000315286 TOM1O60784 492 aa22.4■■□□□ 1.18
CCDC43-201ENST00000315286 SYTL4Q96C24 671 aaPredicted RBP22.4■■□□□ 1.18
CCDC43-201ENST00000315286 IL25Q9H293 177 aa22.4■■□□□ 1.18
CCDC43-201ENST00000315286 ZNF330Q9Y3S2 320 aaPredicted RBP22.4■■□□□ 1.18
CCDC43-201ENST00000315286 STARD3NLO95772 234 aa22.39■■□□□ 1.17
CCDC43-201ENST00000315286 GPATCH3Q96I76 525 aa22.39■■□□□ 1.17
CCDC43-201ENST00000315286 CCDC8Q9H0W5 538 aaPredicted RBP22.39■■□□□ 1.17
CCDC43-201ENST00000315286 ANO2Q9NQ90 1003 aa22.39■■□□□ 1.17
CCDC43-201ENST00000315286 FOXO4P98177 505 aa22.38■■□□□ 1.17
CCDC43-201ENST00000315286 CCDC191Q8NCU4 936 aa22.38■■□□□ 1.17
CCDC43-201ENST00000315286 SLC4A9Q96Q91 983 aa22.38■■□□□ 1.17
CCDC43-201ENST00000315286 CHMP5Q9NZZ3 219 aa22.38■■□□□ 1.17
CCDC43-201ENST00000315286 LMBR1LQ6UX01 489 aa22.38■■□□□ 1.17
CCDC43-201ENST00000315286 CDCA7Q9BWT1 371 aaPredicted RBP22.38■■□□□ 1.17
CCDC43-201ENST00000315286 TJP1Q07157 1748 aa22.38■■□□□ 1.17
CCDC43-201ENST00000315286 PRIM1P49642 420 aaKnown RBP22.37■■□□□ 1.17
CCDC43-201ENST00000315286 THRAP3Q9Y2W1 955 aaKnown RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms